Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_pT_H11
(490 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 34 0.064
AF043700-5|AAB97575.2| 573|Caenorhabditis elegans Lipid deplete... 31 0.34
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 31 0.45
Z82093-9|CAD27620.1| 2920|Caenorhabditis elegans Hypothetical pr... 30 1.0
Z82064-3|CAD27611.1| 2920|Caenorhabditis elegans Hypothetical pr... 30 1.0
AL032638-2|CAD27619.1| 2920|Caenorhabditis elegans Hypothetical ... 30 1.0
AJ307058-1|CAC38842.1| 2920|Caenorhabditis elegans HMR-1B protei... 30 1.0
Z99278-4|CAB16492.1| 871|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z81043-8|CAB02804.2| 550|Caenorhabditis elegans Hypothetical pr... 28 3.2
U61237-1|AAB17542.1| 550|Caenorhabditis elegans M89 protein. 28 3.2
AL023813-2|CAA19424.2| 550|Caenorhabditis elegans Hypothetical ... 28 3.2
AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical ... 28 3.2
Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical pr... 28 4.2
Z30215-9|CAB54247.1| 1037|Caenorhabditis elegans Hypothetical pr... 28 4.2
Z30215-8|CAA82941.1| 1040|Caenorhabditis elegans Hypothetical pr... 28 4.2
Z29121-4|CAB54514.1| 1037|Caenorhabditis elegans Hypothetical pr... 28 4.2
Z29121-3|CAA82389.1| 1040|Caenorhabditis elegans Hypothetical pr... 28 4.2
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 28 4.2
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 28 4.2
AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical... 28 4.2
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 28 4.2
Z19152-11|CAA79540.2| 1003|Caenorhabditis elegans Hypothetical p... 27 5.5
Z19152-6|CAA79542.2| 774|Caenorhabditis elegans Hypothetical pr... 27 5.5
Z19152-5|CAA79541.1| 698|Caenorhabditis elegans Hypothetical pr... 27 5.5
U41014-1|AAK32947.3| 641|Caenorhabditis elegans Hypothetical pr... 27 5.5
AF241656-1|AAG36873.1| 698|Caenorhabditis elegans SR protein sp... 27 5.5
AF068708-5|AAK68200.1| 628|Caenorhabditis elegans P granule abn... 27 5.5
AF068708-4|AAC17755.1| 693|Caenorhabditis elegans P granule abn... 27 5.5
AB120729-1|BAC87886.1| 693|Caenorhabditis elegans PGL-3 protein. 27 5.5
U23525-4|AAU05558.1| 455|Caenorhabditis elegans Nematode astaci... 27 7.3
U23525-3|AAC46566.2| 579|Caenorhabditis elegans Nematode astaci... 27 7.3
Z68008-4|CAA92000.4| 1137|Caenorhabditis elegans Hypothetical pr... 27 9.7
U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical pr... 27 9.7
U61288-1|AAB17543.1| 790|Caenorhabditis elegans CE protein. 27 9.7
U42991-1|AAA85197.1| 118|Caenorhabditis elegans RNA binding pro... 27 9.7
U24124-1|AAA77029.1| 118|Caenorhabditis elegans RRM-type RNA bi... 27 9.7
U00047-9|AAY43977.1| 293|Caenorhabditis elegans Hypothetical pr... 27 9.7
AF038614-8|AAB92055.1| 118|Caenorhabditis elegans Hypothetical ... 27 9.7
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 33.9 bits (74), Expect = 0.064
Identities = 18/43 (41%), Positives = 22/43 (51%)
Frame = +3
Query: 84 RVGHGSGMHNRSGVHNGRGVHKGTCGVGQRGGDFGNFSNVGEG 212
R GHG H+R G H G G H G+C G G G+ + G G
Sbjct: 271 RHGHGGSGHHRGGRHGGHGRH-GSCS-GSPRGRHGHGGHGGHG 311
Score = 30.3 bits (65), Expect = 0.78
Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Frame = +3
Query: 84 RVGHGSGMHNRSGVHNGRGVHKGTCG-VGQRGGDFG 188
R GHG H+R G H G G H G G R G G
Sbjct: 320 RHGHGGSGHHRGGRHGGHGRHGSRSGSPGGRHGHGG 355
Score = 29.5 bits (63), Expect = 1.4
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = +3
Query: 84 RVGHGSGMHNRSGVHNGRGVHKGTCGVGQRGGDFG 188
R GHG +RSG GR H G G G R G G
Sbjct: 235 RRGHGGRHGSRSGSPGGRHGHGGHGGHGSRSGSPG 269
>AF043700-5|AAB97575.2| 573|Caenorhabditis elegans Lipid depleted
protein 6 protein.
Length = 573
Score = 31.5 bits (68), Expect = 0.34
Identities = 20/45 (44%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +3
Query: 84 RVGHGSGMHNRSGVHNG--RGVHKGTCGVGQRGGDFGNFSNVGEG 212
R G G RSG +G RG G G G RGGD G F G G
Sbjct: 509 RGGDRGGFRGRSGDRDGGFRGGFGGRGGGGFRGGDRGGFRGRGGG 553
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 31.1 bits (67), Expect = 0.45
Identities = 18/41 (43%), Positives = 19/41 (46%)
Frame = +3
Query: 84 RVGHGSGMHNRSGVHNGRGVHKGTCGVGQRGGDFGNFSNVG 206
R G+G G GRG G G G RGGDFG N G
Sbjct: 808 RGGYGGRGGGFGGTGRGRG--GGVFGGGGRGGDFGGSGNFG 846
>Z82093-9|CAD27620.1| 2920|Caenorhabditis elegans Hypothetical
protein W02B9.1b protein.
Length = 2920
Score = 29.9 bits (64), Expect = 1.0
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = -3
Query: 395 QYSFAYDVQDSLTGDSKTQHETRDGDVVQGSYSVVDPDG--TKRTVDYTADPHNGFNAVV 222
QY+ A+ +D+ G Q + RD D + +YS +D +G T++ ++ D H G +
Sbjct: 752 QYT-AFVAEDAQGGTPVIQIQARDADRDEVTYSFMDKNGRSTQKMNLFSIDEHTGLVKLR 810
Query: 221 HKEPLAHVAK 192
H A +A+
Sbjct: 811 HGVSAADLAE 820
>Z82064-3|CAD27611.1| 2920|Caenorhabditis elegans Hypothetical
protein W02B9.1b protein.
Length = 2920
Score = 29.9 bits (64), Expect = 1.0
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = -3
Query: 395 QYSFAYDVQDSLTGDSKTQHETRDGDVVQGSYSVVDPDG--TKRTVDYTADPHNGFNAVV 222
QY+ A+ +D+ G Q + RD D + +YS +D +G T++ ++ D H G +
Sbjct: 752 QYT-AFVAEDAQGGTPVIQIQARDADRDEVTYSFMDKNGRSTQKMNLFSIDEHTGLVKLR 810
Query: 221 HKEPLAHVAK 192
H A +A+
Sbjct: 811 HGVSAADLAE 820
>AL032638-2|CAD27619.1| 2920|Caenorhabditis elegans Hypothetical
protein W02B9.1b protein.
Length = 2920
Score = 29.9 bits (64), Expect = 1.0
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = -3
Query: 395 QYSFAYDVQDSLTGDSKTQHETRDGDVVQGSYSVVDPDG--TKRTVDYTADPHNGFNAVV 222
QY+ A+ +D+ G Q + RD D + +YS +D +G T++ ++ D H G +
Sbjct: 752 QYT-AFVAEDAQGGTPVIQIQARDADRDEVTYSFMDKNGRSTQKMNLFSIDEHTGLVKLR 810
Query: 221 HKEPLAHVAK 192
H A +A+
Sbjct: 811 HGVSAADLAE 820
>AJ307058-1|CAC38842.1| 2920|Caenorhabditis elegans HMR-1B protein
protein.
Length = 2920
Score = 29.9 bits (64), Expect = 1.0
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = -3
Query: 395 QYSFAYDVQDSLTGDSKTQHETRDGDVVQGSYSVVDPDG--TKRTVDYTADPHNGFNAVV 222
QY+ A+ +D+ G Q + RD D + +YS +D +G T++ ++ D H G +
Sbjct: 752 QYT-AFVAEDAQGGTPVIQIQARDADRDEVTYSFMDKNGRSTQKMNLFSIDEHTGLVKLR 810
Query: 221 HKEPLAHVAK 192
H A +A+
Sbjct: 811 HGVSAADLAE 820
>Z99278-4|CAB16492.1| 871|Caenorhabditis elegans Hypothetical
protein Y53C12B.3b protein.
Length = 871
Score = 28.7 bits (61), Expect = 2.4
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = +3
Query: 90 GHGSGMHNRSGVHNGRGVHKGTCGVGQRGGDFGNFSN 200
G SG SG GRG + G G GG GN+ N
Sbjct: 832 GRSSGGSGGSGRGGGRGGYSRGHGGGSGGGQRGNYQN 868
>Z81043-8|CAB02804.2| 550|Caenorhabditis elegans Hypothetical
protein C29F3.2 protein.
Length = 550
Score = 28.3 bits (60), Expect = 3.2
Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 2/85 (2%)
Frame = -3
Query: 416 EEYDAHPQYSFAY--DVQDSLTGDSKTQHETRDGDVVQGSYSVVDPDGTKRTVDYTADPH 243
E Y QY+F Y +++ S+ + + +E V ++ +DP R +D
Sbjct: 160 EVYQNESQYAFDYISNIEKSMDENGEVYYE-----VNIRRFACLDPHNADRRIDEVWSSE 214
Query: 242 NGFNAVVHKEPLAHVAKVAKIAAPL 168
N V ++P+A A + AP+
Sbjct: 215 NTIRKVNGQKPIAQQAPNVAVNAPI 239
>U61237-1|AAB17542.1| 550|Caenorhabditis elegans M89 protein.
Length = 550
Score = 28.3 bits (60), Expect = 3.2
Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 2/85 (2%)
Frame = -3
Query: 416 EEYDAHPQYSFAY--DVQDSLTGDSKTQHETRDGDVVQGSYSVVDPDGTKRTVDYTADPH 243
E Y QY+F Y +++ S+ + + +E V ++ +DP R +D
Sbjct: 160 EVYQNESQYAFDYISNIEKSMDENGEVYYE-----VNIRRFACLDPHNADRRIDEVWSSE 214
Query: 242 NGFNAVVHKEPLAHVAKVAKIAAPL 168
N V ++P+A A + AP+
Sbjct: 215 NTIRKVNGQKPIAQQAPNVAVNAPI 239
>AL023813-2|CAA19424.2| 550|Caenorhabditis elegans Hypothetical
protein C29F3.2 protein.
Length = 550
Score = 28.3 bits (60), Expect = 3.2
Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 2/85 (2%)
Frame = -3
Query: 416 EEYDAHPQYSFAY--DVQDSLTGDSKTQHETRDGDVVQGSYSVVDPDGTKRTVDYTADPH 243
E Y QY+F Y +++ S+ + + +E V ++ +DP R +D
Sbjct: 160 EVYQNESQYAFDYISNIEKSMDENGEVYYE-----VNIRRFACLDPHNADRRIDEVWSSE 214
Query: 242 NGFNAVVHKEPLAHVAKVAKIAAPL 168
N V ++P+A A + AP+
Sbjct: 215 NTIRKVNGQKPIAQQAPNVAVNAPI 239
>AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical
protein Y66H1A.4 protein.
Length = 244
Score = 28.3 bits (60), Expect = 3.2
Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Frame = +3
Query: 90 GHGSGMH--NRSGVHNGRGVHKGTCGVGQRGGDFGNFSNVGEG 212
G G G +R G GRG +G G RGG G+F G G
Sbjct: 180 GGGGGFRGGDRGGFGGGRGGFRGGDRGGFRGGRGGDFGGRGRG 222
Score = 26.6 bits (56), Expect = 9.7
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = +3
Query: 90 GHGSGMHNRSGVHNGRGVHKGTCGVGQRGGDFG 188
G G G R G GRG +G G RGG G
Sbjct: 152 GRGRGGRGRGGDRGGRGSDRGGRGGFGRGGGGG 184
>Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical
protein R08B4.1b protein.
Length = 1160
Score = 27.9 bits (59), Expect = 4.2
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = +3
Query: 90 GHGSGMHNRSGVHNGRGVHKGTCGVGQRGGDFGNFSNVGEG 212
G GSG G ++ G G G G GG GN G+G
Sbjct: 805 GGGSGGSGGGGSNSNSGGGGGNGGGGNGGGGNGNGGGAGDG 845
Score = 26.6 bits (56), Expect = 9.7
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = +3
Query: 90 GHGSGMHNRSGVHNGRGVHKGTCGVGQRGGDFGNFSNVGEG 212
G G+G N +G NG G G G G G+ GN + G G
Sbjct: 848 GAGAGNGNGAGAGNGNGAGAGN-GNGAGAGN-GNGAGAGNG 886
>Z30215-9|CAB54247.1| 1037|Caenorhabditis elegans Hypothetical
protein ZK757.3b protein.
Length = 1037
Score = 27.9 bits (59), Expect = 4.2
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +3
Query: 120 GVHNGRGVHKGTCGVGQRGGDFGNFSNVG 206
G G G ++G G G RGG +GNF N G
Sbjct: 332 GGPGGPGGYRGGRG-GGRGGSYGNFGNRG 359
>Z30215-8|CAA82941.1| 1040|Caenorhabditis elegans Hypothetical
protein ZK757.3a protein.
Length = 1040
Score = 27.9 bits (59), Expect = 4.2
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +3
Query: 120 GVHNGRGVHKGTCGVGQRGGDFGNFSNVG 206
G G G ++G G G RGG +GNF N G
Sbjct: 335 GGPGGPGGYRGGRG-GGRGGSYGNFGNRG 362
>Z29121-4|CAB54514.1| 1037|Caenorhabditis elegans Hypothetical
protein ZK757.3b protein.
Length = 1037
Score = 27.9 bits (59), Expect = 4.2
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +3
Query: 120 GVHNGRGVHKGTCGVGQRGGDFGNFSNVG 206
G G G ++G G G RGG +GNF N G
Sbjct: 332 GGPGGPGGYRGGRG-GGRGGSYGNFGNRG 359
>Z29121-3|CAA82389.1| 1040|Caenorhabditis elegans Hypothetical
protein ZK757.3a protein.
Length = 1040
Score = 27.9 bits (59), Expect = 4.2
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +3
Query: 120 GVHNGRGVHKGTCGVGQRGGDFGNFSNVG 206
G G G ++G G G RGG +GNF N G
Sbjct: 335 GGPGGPGGYRGGRG-GGRGGSYGNFGNRG 362
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 27.9 bits (59), Expect = 4.2
Identities = 19/43 (44%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Frame = +3
Query: 90 GHGSGMHNRSGVHNGRGVHKGT-CGVGQRGGD-FGNFSNVGEG 212
G G G N G G G GT G G+ GG FG SN G G
Sbjct: 155 GTGFGSGNAGGTGFGSGKAGGTGFGSGKAGGTGFGGNSNSGSG 197
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 27.9 bits (59), Expect = 4.2
Identities = 19/43 (44%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Frame = +3
Query: 90 GHGSGMHNRSGVHNGRGVHKGT-CGVGQRGGD-FGNFSNVGEG 212
G G G N G G G GT G G+ GG FG SN G G
Sbjct: 155 GTGFGSGNAGGTGFGSGKAGGTGFGSGKAGGTGFGGNSNSGSG 197
>AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical
protein K07H8.10 protein.
Length = 798
Score = 27.9 bits (59), Expect = 4.2
Identities = 16/37 (43%), Positives = 18/37 (48%)
Frame = +3
Query: 90 GHGSGMHNRSGVHNGRGVHKGTCGVGQRGGDFGNFSN 200
G GSG R G RG +G G RGGD G S+
Sbjct: 19 GGGSGFTPRGGGGGFRGGDRGRSPGGFRGGDRGRSSS 55
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 27.9 bits (59), Expect = 4.2
Identities = 19/43 (44%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Frame = +3
Query: 90 GHGSGMHNRSGVHNGRGVHKGT-CGVGQRGGD-FGNFSNVGEG 212
G G G N G G G GT G G+ GG FG SN G G
Sbjct: 155 GTGFGSGNAGGTGFGSGKAGGTGFGSGKAGGTGFGGNSNSGSG 197
>Z19152-11|CAA79540.2| 1003|Caenorhabditis elegans Hypothetical
protein B0464.5a protein.
Length = 1003
Score = 27.5 bits (58), Expect = 5.5
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -3
Query: 269 TVDYTADPHNGFNAVVHKEPLAHVAKVAKIAAPLTY 162
T DY +PH G N ++ LAH++++ P Y
Sbjct: 797 TGDYLFEPHQGDNYSRDEDHLAHISELLGAIPPSIY 832
>Z19152-6|CAA79542.2| 774|Caenorhabditis elegans Hypothetical
protein B0464.5c protein.
Length = 774
Score = 27.5 bits (58), Expect = 5.5
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -3
Query: 269 TVDYTADPHNGFNAVVHKEPLAHVAKVAKIAAPLTY 162
T DY +PH G N ++ LAH++++ P Y
Sbjct: 568 TGDYLFEPHQGDNYSRDEDHLAHISELLGAIPPSIY 603
>Z19152-5|CAA79541.1| 698|Caenorhabditis elegans Hypothetical
protein B0464.5b protein.
Length = 698
Score = 27.5 bits (58), Expect = 5.5
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -3
Query: 269 TVDYTADPHNGFNAVVHKEPLAHVAKVAKIAAPLTY 162
T DY +PH G N ++ LAH++++ P Y
Sbjct: 509 TGDYLFEPHQGDNYSRDEDHLAHISELLGAIPPSIY 544
>U41014-1|AAK32947.3| 641|Caenorhabditis elegans Hypothetical
protein C06G1.4 protein.
Length = 641
Score = 27.5 bits (58), Expect = 5.5
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = +3
Query: 90 GHGSGMHNRSGVHNGRGVHKGTCGVGQRGGDFGNFSNVGEG 212
GHGS +N +G G+G H G RGG + S G G
Sbjct: 277 GHGSWKNNNAG--GGQGGHGGQRNYNNRGGMGHSGSQSGGG 315
>AF241656-1|AAG36873.1| 698|Caenorhabditis elegans SR protein
specfic kinase SPK-1 protein.
Length = 698
Score = 27.5 bits (58), Expect = 5.5
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -3
Query: 269 TVDYTADPHNGFNAVVHKEPLAHVAKVAKIAAPLTY 162
T DY +PH G N ++ LAH++++ P Y
Sbjct: 509 TGDYLFEPHQGDNYSRDEDHLAHISELLGAIPPSIY 544
>AF068708-5|AAK68200.1| 628|Caenorhabditis elegans P granule
abnormality protein 3,isoform b protein.
Length = 628
Score = 27.5 bits (58), Expect = 5.5
Identities = 19/49 (38%), Positives = 21/49 (42%), Gaps = 8/49 (16%)
Frame = +3
Query: 90 GHGSGMHNRSGVHNGRGVHKGTCG--------VGQRGGDFGNFSNVGEG 212
G GS R G GRG + G G G RGGD G + GEG
Sbjct: 561 GRGSYGGGRGGDRGGRGAYGGDRGRGGSGDGSRGYRGGDRGGRGSYGEG 609
>AF068708-4|AAC17755.1| 693|Caenorhabditis elegans P granule
abnormality protein 3,isoform a protein.
Length = 693
Score = 27.5 bits (58), Expect = 5.5
Identities = 19/49 (38%), Positives = 21/49 (42%), Gaps = 8/49 (16%)
Frame = +3
Query: 90 GHGSGMHNRSGVHNGRGVHKGTCG--------VGQRGGDFGNFSNVGEG 212
G GS R G GRG + G G G RGGD G + GEG
Sbjct: 626 GRGSYGGGRGGDRGGRGAYGGDRGRGGSGDGSRGYRGGDRGGRGSYGEG 674
>AB120729-1|BAC87886.1| 693|Caenorhabditis elegans PGL-3 protein.
Length = 693
Score = 27.5 bits (58), Expect = 5.5
Identities = 19/49 (38%), Positives = 21/49 (42%), Gaps = 8/49 (16%)
Frame = +3
Query: 90 GHGSGMHNRSGVHNGRGVHKGTCG--------VGQRGGDFGNFSNVGEG 212
G GS R G GRG + G G G RGGD G + GEG
Sbjct: 626 GRGSYGGGRGGDRGGRGAYGGDRGRGGSGDGSRGYRGGDRGGRGSYGEG 674
>U23525-4|AAU05558.1| 455|Caenorhabditis elegans Nematode astacin
protease protein11, isoform b protein.
Length = 455
Score = 27.1 bits (57), Expect = 7.3
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +3
Query: 441 GNFGEWGGVRYGT 479
GNFG WGG +GT
Sbjct: 30 GNFGNWGGNNWGT 42
>U23525-3|AAC46566.2| 579|Caenorhabditis elegans Nematode astacin
protease protein11, isoform a protein.
Length = 579
Score = 27.1 bits (57), Expect = 7.3
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +3
Query: 441 GNFGEWGGVRYGT 479
GNFG WGG +GT
Sbjct: 30 GNFGNWGGNNWGT 42
>Z68008-4|CAA92000.4| 1137|Caenorhabditis elegans Hypothetical
protein R08B4.1a protein.
Length = 1137
Score = 26.6 bits (56), Expect = 9.7
Identities = 19/56 (33%), Positives = 24/56 (42%)
Frame = +3
Query: 45 LTSDKTLMMVDWSRVGHGSGMHNRSGVHNGRGVHKGTCGVGQRGGDFGNFSNVGEG 212
+ +D TL S G G G ++ SG G G G G GG GN G+G
Sbjct: 773 IPNDPTLGGPTGSSGGGGGGSNSNSGGGGGNG------GGGNGGGGNGNGGGAGDG 822
Score = 26.6 bits (56), Expect = 9.7
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = +3
Query: 90 GHGSGMHNRSGVHNGRGVHKGTCGVGQRGGDFGNFSNVGEG 212
G G+G N +G NG G G G G G+ GN + G G
Sbjct: 825 GAGAGNGNGAGAGNGNGAGAGN-GNGAGAGN-GNGAGAGNG 863
>U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical
protein F07C4.7 protein.
Length = 180
Score = 26.6 bits (56), Expect = 9.7
Identities = 15/47 (31%), Positives = 20/47 (42%), Gaps = 2/47 (4%)
Frame = +3
Query: 75 DWSRVGHGSGMHNRSGVHNGRGVHKGTCGV--GQRGGDFGNFSNVGE 209
+W+ G G +G +NG G G G G RGG G G+
Sbjct: 44 EWNNGGGRGGFGGNNGWNNGGGGFNGNGGFNGGGRGGGRGGNGGFGD 90
>U61288-1|AAB17543.1| 790|Caenorhabditis elegans CE protein.
Length = 790
Score = 26.6 bits (56), Expect = 9.7
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = +3
Query: 90 GHGSGMHNRSGVHNGRGVHKGTCGVGQRGGDFGNFSNVGEG 212
G G+G N +G NG G G G G G+ GN + G G
Sbjct: 478 GAGAGNGNGAGAGNGNGAGAGN-GNGAGAGN-GNGAGAGNG 516
>U42991-1|AAA85197.1| 118|Caenorhabditis elegans RNA binding
protein protein.
Length = 118
Score = 26.6 bits (56), Expect = 9.7
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +3
Query: 96 GSGMHNRSGVHNGRGVHKGTCGVGQRGGDFGNFSNVGE 209
G+G NR G G + G GQ+GG GN G+
Sbjct: 49 GNGYGNRGGYGQQGGYYGQQGGYGQQGGYGGNQGYYGQ 86
>U24124-1|AAA77029.1| 118|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 118
Score = 26.6 bits (56), Expect = 9.7
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +3
Query: 96 GSGMHNRSGVHNGRGVHKGTCGVGQRGGDFGNFSNVGE 209
G+G NR G G + G GQ+GG GN G+
Sbjct: 49 GNGYGNRGGYGQQGGYYGQQGGYGQQGGYGGNQGYYGQ 86
>U00047-9|AAY43977.1| 293|Caenorhabditis elegans Hypothetical
protein ZK418.10 protein.
Length = 293
Score = 26.6 bits (56), Expect = 9.7
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -3
Query: 89 YSAPIYHH*CLVTSQSKPSEY 27
YSA + +H CL Q+ PS Y
Sbjct: 233 YSAALINHCCLTNQQNAPSRY 253
>AF038614-8|AAB92055.1| 118|Caenorhabditis elegans Hypothetical
protein F15E6.3 protein.
Length = 118
Score = 26.6 bits (56), Expect = 9.7
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +3
Query: 96 GSGMHNRSGVHNGRGVHKGTCGVGQRGGDFGNFSNVGE 209
G+G NR G G + G GQ+GG GN G+
Sbjct: 49 GNGYGNRGGYGQQGGYYGQQGGYGQQGGYGGNQGYYGQ 86
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,850,611
Number of Sequences: 27780
Number of extensions: 102881
Number of successful extensions: 428
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 325
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 406
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 914086948
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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