Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_pT_H07
(883 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC122550-1|AAI22551.1| 475|Homo sapiens VCP protein protein. 161 4e-39
BC121794-1|AAI21795.1| 806|Homo sapiens valosin-containing prot... 161 4e-39
BC110913-1|AAI10914.1| 806|Homo sapiens valosin-containing prot... 161 4e-39
BC007562-1|AAH07562.2| 644|Homo sapiens VCP protein protein. 161 4e-39
AL353795-2|CAH70993.1| 806|Homo sapiens valosin-containing prot... 161 4e-39
AF100752-1|AAD43016.1| 806|Homo sapiens transitional endoplasmi... 161 4e-39
AC004472-1|AAC07984.1| 806|Homo sapiens TERA_HUMAN protein. 161 4e-39
BX276089-2|CAI16431.1| 491|Homo sapiens katanin p60 (ATPase-con... 42 0.004
AL078581-2|CAI19505.1| 491|Homo sapiens katanin p60 (ATPase-con... 42 0.004
AF056022-1|AAC25114.1| 491|Homo sapiens p60 katanin protein. 42 0.004
BC000612-1|AAH00612.1| 490|Homo sapiens katanin p60 subunit A-l... 41 0.005
AL356750-1|CAI13718.1| 490|Homo sapiens katanin p60 subunit A-l... 41 0.005
BC051867-1|AAH51867.1| 674|Homo sapiens fidgetin-like 1 protein. 36 0.26
BC027856-1|AAH27856.1| 674|Homo sapiens FIGNL1 protein protein. 36 0.26
AK023411-1|BAB14567.1| 254|Homo sapiens protein ( Homo sapiens ... 36 0.26
AC018705-1|AAS01996.1| 674|Homo sapiens unknown protein. 36 0.26
AK023142-1|BAB14426.1| 674|Homo sapiens protein ( Homo sapiens ... 35 0.45
BC063530-1|AAH63530.1| 330|Homo sapiens ATAD1 protein protein. 33 1.0
BC010868-1|AAH10868.1| 151|Homo sapiens ATAD1 protein protein. 33 1.0
AL133327-1|CAI16701.1| 361|Homo sapiens ATPase family, AAA doma... 33 1.0
AK075223-1|BAC11482.1| 361|Homo sapiens protein ( Homo sapiens ... 33 1.0
AK027506-1|BAB55161.1| 151|Homo sapiens protein ( Homo sapiens ... 33 1.0
U78772-1|AAB70460.1| 750|Homo sapiens nuclear VCP-like protein ... 33 1.4
U68140-1|AAB70457.1| 856|Homo sapiens nuclear VCP-like protein ... 33 1.4
BC012105-1|AAH12105.1| 659|Homo sapiens NVL protein protein. 33 1.4
BC111958-1|AAI11959.1| 710|Homo sapiens ral guanine nucleotide ... 33 1.8
BC101756-1|AAI01757.1| 710|Homo sapiens ral guanine nucleotide ... 33 1.8
AK074082-1|BAB84908.1| 497|Homo sapiens FLJ00153 protein protein. 33 1.8
Y18314-1|CAB48398.1| 797|Homo sapiens paraplegin-like protein p... 32 2.4
BC065016-1|AAH65016.1| 797|Homo sapiens AFG3 ATPase family gene... 32 2.4
BC024282-1|AAH24282.1| 812|Homo sapiens Similar to AFG3 ATPase ... 32 2.4
Y16610-1|CAA76314.1| 795|Homo sapiens paraplegin protein. 31 4.2
BC036104-1|AAH36104.1| 795|Homo sapiens spastic paraplegia 7 (p... 31 4.2
BC035929-1|AAH35929.1| 732|Homo sapiens SPG7 protein protein. 31 4.2
BC034491-1|AAH34491.1| 406|Homo sapiens chromosome 12 open read... 31 4.2
BC027600-1|AAH27600.1| 406|Homo sapiens chromosome 12 open read... 31 4.2
BC026075-1|AAH26075.1| 406|Homo sapiens chromosome 12 open read... 31 4.2
BC024183-1|AAH24183.1| 406|Homo sapiens chromosome 12 open read... 31 4.2
AF080525-1|AAD28099.1| 795|Homo sapiens paraplegin protein. 31 4.2
D78275-1|BAA11338.1| 389|Homo sapiens proteasome subunit p42 pr... 31 5.5
CR456709-1|CAG32990.1| 389|Homo sapiens PSMC6 protein. 31 5.5
BT006843-1|AAP35489.1| 389|Homo sapiens proteasome (prosome, ma... 31 5.5
BC005390-1|AAH05390.1| 389|Homo sapiens proteasome (prosome, ma... 31 5.5
AF006305-1|AAB61616.1| 389|Homo sapiens 26S proteasome regulato... 31 5.5
>BC122550-1|AAI22551.1| 475|Homo sapiens VCP protein protein.
Length = 475
Score = 161 bits (390), Expect = 4e-39
Identities = 81/118 (68%), Positives = 95/118 (80%)
Frame = -2
Query: 882 YIAKVTQGFSGADLTEICQRACKLAIRQAXEAEIHRERSRXXXXXXAVMDMDEEDPVPEI 703
++AK+T GFSGADLTEICQRACKLAIR++ E+EI RER R M+++E+DPVPEI
Sbjct: 343 FLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSA--MEVEEDDPVPEI 400
Query: 702 SRAHFEEAMKFARRSVSDNDIRKYEMFAQTLQQSRGFGTNFRFPTKRGSYRGHGYFSG 529
R HFEEAM+FARRSVSDNDIRKYEMFAQTLQQSRGFG +FRFP+ G+ G G G
Sbjct: 401 RRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFG-SFRFPS--GNQGGAGPSQG 455
>BC121794-1|AAI21795.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 161 bits (390), Expect = 4e-39
Identities = 81/118 (68%), Positives = 95/118 (80%)
Frame = -2
Query: 882 YIAKVTQGFSGADLTEICQRACKLAIRQAXEAEIHRERSRXXXXXXAVMDMDEEDPVPEI 703
++AK+T GFSGADLTEICQRACKLAIR++ E+EI RER R M+++E+DPVPEI
Sbjct: 674 FLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSA--MEVEEDDPVPEI 731
Query: 702 SRAHFEEAMKFARRSVSDNDIRKYEMFAQTLQQSRGFGTNFRFPTKRGSYRGHGYFSG 529
R HFEEAM+FARRSVSDNDIRKYEMFAQTLQQSRGFG +FRFP+ G+ G G G
Sbjct: 732 RRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFG-SFRFPS--GNQGGAGPSQG 786
>BC110913-1|AAI10914.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 161 bits (390), Expect = 4e-39
Identities = 81/118 (68%), Positives = 95/118 (80%)
Frame = -2
Query: 882 YIAKVTQGFSGADLTEICQRACKLAIRQAXEAEIHRERSRXXXXXXAVMDMDEEDPVPEI 703
++AK+T GFSGADLTEICQRACKLAIR++ E+EI RER R M+++E+DPVPEI
Sbjct: 674 FLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSA--MEVEEDDPVPEI 731
Query: 702 SRAHFEEAMKFARRSVSDNDIRKYEMFAQTLQQSRGFGTNFRFPTKRGSYRGHGYFSG 529
R HFEEAM+FARRSVSDNDIRKYEMFAQTLQQSRGFG +FRFP+ G+ G G G
Sbjct: 732 RRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFG-SFRFPS--GNQGGAGPSQG 786
>BC007562-1|AAH07562.2| 644|Homo sapiens VCP protein protein.
Length = 644
Score = 161 bits (390), Expect = 4e-39
Identities = 81/118 (68%), Positives = 95/118 (80%)
Frame = -2
Query: 882 YIAKVTQGFSGADLTEICQRACKLAIRQAXEAEIHRERSRXXXXXXAVMDMDEEDPVPEI 703
++AK+T GFSGADLTEICQRACKLAIR++ E+EI RER R M+++E+DPVPEI
Sbjct: 512 FLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSA--MEVEEDDPVPEI 569
Query: 702 SRAHFEEAMKFARRSVSDNDIRKYEMFAQTLQQSRGFGTNFRFPTKRGSYRGHGYFSG 529
R HFEEAM+FARRSVSDNDIRKYEMFAQTLQQSRGFG +FRFP+ G+ G G G
Sbjct: 570 RRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFG-SFRFPS--GNQGGAGPSQG 624
>AL353795-2|CAH70993.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 161 bits (390), Expect = 4e-39
Identities = 81/118 (68%), Positives = 95/118 (80%)
Frame = -2
Query: 882 YIAKVTQGFSGADLTEICQRACKLAIRQAXEAEIHRERSRXXXXXXAVMDMDEEDPVPEI 703
++AK+T GFSGADLTEICQRACKLAIR++ E+EI RER R M+++E+DPVPEI
Sbjct: 674 FLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSA--MEVEEDDPVPEI 731
Query: 702 SRAHFEEAMKFARRSVSDNDIRKYEMFAQTLQQSRGFGTNFRFPTKRGSYRGHGYFSG 529
R HFEEAM+FARRSVSDNDIRKYEMFAQTLQQSRGFG +FRFP+ G+ G G G
Sbjct: 732 RRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFG-SFRFPS--GNQGGAGPSQG 786
>AF100752-1|AAD43016.1| 806|Homo sapiens transitional endoplasmic
reticulum ATPase protein.
Length = 806
Score = 161 bits (390), Expect = 4e-39
Identities = 81/118 (68%), Positives = 95/118 (80%)
Frame = -2
Query: 882 YIAKVTQGFSGADLTEICQRACKLAIRQAXEAEIHRERSRXXXXXXAVMDMDEEDPVPEI 703
++AK+T GFSGADLTEICQRACKLAIR++ E+EI RER R M+++E+DPVPEI
Sbjct: 674 FLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSA--MEVEEDDPVPEI 731
Query: 702 SRAHFEEAMKFARRSVSDNDIRKYEMFAQTLQQSRGFGTNFRFPTKRGSYRGHGYFSG 529
R HFEEAM+FARRSVSDNDIRKYEMFAQTLQQSRGFG +FRFP+ G+ G G G
Sbjct: 732 RRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFG-SFRFPS--GNQGGAGPSQG 786
>AC004472-1|AAC07984.1| 806|Homo sapiens TERA_HUMAN protein.
Length = 806
Score = 161 bits (390), Expect = 4e-39
Identities = 81/118 (68%), Positives = 95/118 (80%)
Frame = -2
Query: 882 YIAKVTQGFSGADLTEICQRACKLAIRQAXEAEIHRERSRXXXXXXAVMDMDEEDPVPEI 703
++AK+T GFSGADLTEICQRACKLAIR++ E+EI RER R M+++E+DPVPEI
Sbjct: 674 FLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSA--MEVEEDDPVPEI 731
Query: 702 SRAHFEEAMKFARRSVSDNDIRKYEMFAQTLQQSRGFGTNFRFPTKRGSYRGHGYFSG 529
R HFEEAM+FARRSVSDNDIRKYEMFAQTLQQSRGFG +FRFP+ G+ G G G
Sbjct: 732 RRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFG-SFRFPS--GNQGGAGPSQG 786
>BX276089-2|CAI16431.1| 491|Homo sapiens katanin p60
(ATPase-containing) subunit A 1 protein.
Length = 491
Score = 41.5 bits (93), Expect = 0.004
Identities = 26/84 (30%), Positives = 44/84 (52%)
Frame = -2
Query: 879 IAKVTQGFSGADLTEICQRACKLAIRQAXEAEIHRERSRXXXXXXAVMDMDEEDPVPEIS 700
IA+ +G+SGAD+T +C+ A +A+R+ E E + ++ +E+ +
Sbjct: 409 IAENMEGYSGADITNVCRDASLMAMRRRIEGLTPEE----------IRNLSKEEMHMPTT 458
Query: 699 RAHFEEAMKFARRSVSDNDIRKYE 628
FE A+K +SVS DI +YE
Sbjct: 459 MEDFEMALKKVSKSVSAADIERYE 482
>AL078581-2|CAI19505.1| 491|Homo sapiens katanin p60
(ATPase-containing) subunit A 1 protein.
Length = 491
Score = 41.5 bits (93), Expect = 0.004
Identities = 26/84 (30%), Positives = 44/84 (52%)
Frame = -2
Query: 879 IAKVTQGFSGADLTEICQRACKLAIRQAXEAEIHRERSRXXXXXXAVMDMDEEDPVPEIS 700
IA+ +G+SGAD+T +C+ A +A+R+ E E + ++ +E+ +
Sbjct: 409 IAENMEGYSGADITNVCRDASLMAMRRRIEGLTPEE----------IRNLSKEEMHMPTT 458
Query: 699 RAHFEEAMKFARRSVSDNDIRKYE 628
FE A+K +SVS DI +YE
Sbjct: 459 MEDFEMALKKVSKSVSAADIERYE 482
>AF056022-1|AAC25114.1| 491|Homo sapiens p60 katanin protein.
Length = 491
Score = 41.5 bits (93), Expect = 0.004
Identities = 26/84 (30%), Positives = 44/84 (52%)
Frame = -2
Query: 879 IAKVTQGFSGADLTEICQRACKLAIRQAXEAEIHRERSRXXXXXXAVMDMDEEDPVPEIS 700
IA+ +G+SGAD+T +C+ A +A+R+ E E + ++ +E+ +
Sbjct: 409 IAENMEGYSGADITNVCRDASLMAMRRRIEGLTPEE----------IRNLSKEEMHMPTT 458
Query: 699 RAHFEEAMKFARRSVSDNDIRKYE 628
FE A+K +SVS DI +YE
Sbjct: 459 MEDFEMALKKVSKSVSAADIERYE 482
>BC000612-1|AAH00612.1| 490|Homo sapiens katanin p60 subunit A-like
1 protein.
Length = 490
Score = 41.1 bits (92), Expect = 0.005
Identities = 25/84 (29%), Positives = 44/84 (52%)
Frame = -2
Query: 879 IAKVTQGFSGADLTEICQRACKLAIRQAXEAEIHRERSRXXXXXXAVMDMDEEDPVPEIS 700
IA+ +G+SGAD+T +C+ A +A+R+ E + + +E+ ++
Sbjct: 408 IAEKIEGYSGADITNVCRDASLMAMRRRINGLSPEE----------IRALSKEELQMPVT 457
Query: 699 RAHFEEAMKFARRSVSDNDIRKYE 628
+ FE A+K +SVS D+ KYE
Sbjct: 458 KGDFELALKKIAKSVSAADLEKYE 481
>AL356750-1|CAI13718.1| 490|Homo sapiens katanin p60 subunit A-like
1 protein.
Length = 490
Score = 41.1 bits (92), Expect = 0.005
Identities = 25/84 (29%), Positives = 44/84 (52%)
Frame = -2
Query: 879 IAKVTQGFSGADLTEICQRACKLAIRQAXEAEIHRERSRXXXXXXAVMDMDEEDPVPEIS 700
IA+ +G+SGAD+T +C+ A +A+R+ E + + +E+ ++
Sbjct: 408 IAEKIEGYSGADITNVCRDASLMAMRRRINGLSPEE----------IRALSKEELQMPVT 457
Query: 699 RAHFEEAMKFARRSVSDNDIRKYE 628
+ FE A+K +SVS D+ KYE
Sbjct: 458 KGDFELALKKIAKSVSAADLEKYE 481
>BC051867-1|AAH51867.1| 674|Homo sapiens fidgetin-like 1 protein.
Length = 674
Score = 35.5 bits (78), Expect = 0.26
Identities = 28/89 (31%), Positives = 42/89 (47%)
Frame = -2
Query: 879 IAKVTQGFSGADLTEICQRACKLAIRQAXEAEIHRERSRXXXXXXAVMDMDEEDPVPEIS 700
I + + FSGAD+T++C+ A IR A+I A + D+ P+ I
Sbjct: 596 IVQQSDAFSGADMTQLCREASLGPIRSLQTADI------------ATITPDQVRPIAYID 643
Query: 699 RAHFEEAMKFARRSVSDNDIRKYEMFAQT 613
FE A + R SVS D+ YE + +T
Sbjct: 644 ---FENAFRTVRPSVSPKDLELYENWNKT 669
>BC027856-1|AAH27856.1| 674|Homo sapiens FIGNL1 protein protein.
Length = 674
Score = 35.5 bits (78), Expect = 0.26
Identities = 28/89 (31%), Positives = 42/89 (47%)
Frame = -2
Query: 879 IAKVTQGFSGADLTEICQRACKLAIRQAXEAEIHRERSRXXXXXXAVMDMDEEDPVPEIS 700
I + + FSGAD+T++C+ A IR A+I A + D+ P+ I
Sbjct: 596 IVQQSDAFSGADMTQLCREASLGPIRSLQTADI------------ATITPDQVRPIAYID 643
Query: 699 RAHFEEAMKFARRSVSDNDIRKYEMFAQT 613
FE A + R SVS D+ YE + +T
Sbjct: 644 ---FENAFRTVRPSVSPKDLELYENWNKT 669
>AK023411-1|BAB14567.1| 254|Homo sapiens protein ( Homo sapiens
cDNA FLJ13349 fis, clone OVARC1002138, moderately
similar to SAP1 PROTEIN. ).
Length = 254
Score = 35.5 bits (78), Expect = 0.26
Identities = 28/89 (31%), Positives = 42/89 (47%)
Frame = -2
Query: 879 IAKVTQGFSGADLTEICQRACKLAIRQAXEAEIHRERSRXXXXXXAVMDMDEEDPVPEIS 700
I + + FSGAD+T++C+ A IR A+I A + D+ P+ I
Sbjct: 176 IVQQSDAFSGADMTQLCREASLGPIRSLQTADI------------ATITPDQVRPIAYID 223
Query: 699 RAHFEEAMKFARRSVSDNDIRKYEMFAQT 613
FE A + R SVS D+ YE + +T
Sbjct: 224 ---FENAFRTVRPSVSPKDLELYENWNKT 249
>AC018705-1|AAS01996.1| 674|Homo sapiens unknown protein.
Length = 674
Score = 35.5 bits (78), Expect = 0.26
Identities = 28/89 (31%), Positives = 42/89 (47%)
Frame = -2
Query: 879 IAKVTQGFSGADLTEICQRACKLAIRQAXEAEIHRERSRXXXXXXAVMDMDEEDPVPEIS 700
I + + FSGAD+T++C+ A IR A+I A + D+ P+ I
Sbjct: 596 IVQQSDAFSGADMTQLCREASLGPIRSLQTADI------------ATITPDQVRPIAYID 643
Query: 699 RAHFEEAMKFARRSVSDNDIRKYEMFAQT 613
FE A + R SVS D+ YE + +T
Sbjct: 644 ---FENAFRTVRPSVSPKDLELYENWNKT 669
>AK023142-1|BAB14426.1| 674|Homo sapiens protein ( Homo sapiens
cDNA FLJ13080 fis, clone NT2RP3002007, weakly similar to
SAP1 PROTEIN. ).
Length = 674
Score = 34.7 bits (76), Expect = 0.45
Identities = 28/89 (31%), Positives = 42/89 (47%)
Frame = -2
Query: 879 IAKVTQGFSGADLTEICQRACKLAIRQAXEAEIHRERSRXXXXXXAVMDMDEEDPVPEIS 700
I + + FSGAD+T++C+ A IR A+I A + D+ P+ I
Sbjct: 596 IVQQSDAFSGADMTQLCRGASLGPIRSLQTADI------------ATITPDQVRPIAYID 643
Query: 699 RAHFEEAMKFARRSVSDNDIRKYEMFAQT 613
FE A + R SVS D+ YE + +T
Sbjct: 644 ---FENAFRTVRPSVSPKDLELYENWNKT 669
>BC063530-1|AAH63530.1| 330|Homo sapiens ATAD1 protein protein.
Length = 330
Score = 33.5 bits (73), Expect = 1.0
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = -2
Query: 879 IAKVTQGFSGADLTEICQRACKLAIRQ 799
+A+ T GFSG+DL E+C+ A L +R+
Sbjct: 256 VAQETDGFSGSDLKEMCRDAALLCVRE 282
>BC010868-1|AAH10868.1| 151|Homo sapiens ATAD1 protein protein.
Length = 151
Score = 33.5 bits (73), Expect = 1.0
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = -2
Query: 879 IAKVTQGFSGADLTEICQRACKLAIRQ 799
+A+ T GFSG+DL E+C+ A L +R+
Sbjct: 77 VAQETDGFSGSDLKEMCRDAALLCVRE 103
>AL133327-1|CAI16701.1| 361|Homo sapiens ATPase family, AAA domain
containing 1 protein.
Length = 361
Score = 33.5 bits (73), Expect = 1.0
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = -2
Query: 879 IAKVTQGFSGADLTEICQRACKLAIRQ 799
+A+ T GFSG+DL E+C+ A L +R+
Sbjct: 287 VAQETDGFSGSDLKEMCRDAALLCVRE 313
>AK075223-1|BAC11482.1| 361|Homo sapiens protein ( Homo sapiens
cDNA FLJ90742 fis, clone PLACE1011181, weakly similar to
MSP1 PROTEIN HOMOLOG. ).
Length = 361
Score = 33.5 bits (73), Expect = 1.0
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = -2
Query: 879 IAKVTQGFSGADLTEICQRACKLAIRQ 799
+A+ T GFSG+DL E+C+ A L +R+
Sbjct: 287 VAQETDGFSGSDLKEMCRDAALLCVRE 313
>AK027506-1|BAB55161.1| 151|Homo sapiens protein ( Homo sapiens
cDNA FLJ14600 fis, clone NT2RM4002594, moderately
similar to MSP1 PROTEIN HOMOLOG. ).
Length = 151
Score = 33.5 bits (73), Expect = 1.0
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = -2
Query: 879 IAKVTQGFSGADLTEICQRACKLAIRQ 799
+A+ T GFSG+DL E+C+ A L +R+
Sbjct: 77 VAQETDGFSGSDLKEMCRDAALLCVRE 103
>U78772-1|AAB70460.1| 750|Homo sapiens nuclear VCP-like protein
NVLp.1 protein.
Length = 750
Score = 33.1 bits (72), Expect = 1.4
Identities = 26/85 (30%), Positives = 41/85 (48%)
Frame = -2
Query: 858 FSGADLTEICQRACKLAIRQAXEAEIHRERSRXXXXXXAVMDMDEEDPVPEISRAHFEEA 679
++GADL+ + + A A+RQ E+ R++S E ++S HFEEA
Sbjct: 682 YTGADLSALVREASICALRQ----EMARQKS------------GNEKGELKVSHKHFEEA 725
Query: 678 MKFARRSVSDNDIRKYEMFAQTLQQ 604
K R S+S D YE ++L +
Sbjct: 726 FKKVRSSISKKDQIMYERLQESLSR 750
>U68140-1|AAB70457.1| 856|Homo sapiens nuclear VCP-like protein
NVLp.2 protein.
Length = 856
Score = 33.1 bits (72), Expect = 1.4
Identities = 26/85 (30%), Positives = 41/85 (48%)
Frame = -2
Query: 858 FSGADLTEICQRACKLAIRQAXEAEIHRERSRXXXXXXAVMDMDEEDPVPEISRAHFEEA 679
++GADL+ + + A A+RQ E+ R++S E ++S HFEEA
Sbjct: 788 YTGADLSALVREASICALRQ----EMARQKS------------GNEKGELKVSHKHFEEA 831
Query: 678 MKFARRSVSDNDIRKYEMFAQTLQQ 604
K R S+S D YE ++L +
Sbjct: 832 FKKVRSSISKKDQIMYERLQESLSR 856
>BC012105-1|AAH12105.1| 659|Homo sapiens NVL protein protein.
Length = 659
Score = 33.1 bits (72), Expect = 1.4
Identities = 26/85 (30%), Positives = 41/85 (48%)
Frame = -2
Query: 858 FSGADLTEICQRACKLAIRQAXEAEIHRERSRXXXXXXAVMDMDEEDPVPEISRAHFEEA 679
++GADL+ + + A A+RQ E+ R++S E ++S HFEEA
Sbjct: 591 YTGADLSALVREASICALRQ----EMARQKS------------GNEKGELKVSHKHFEEA 634
Query: 678 MKFARRSVSDNDIRKYEMFAQTLQQ 604
K R S+S D YE ++L +
Sbjct: 635 FKKVRSSISKKDQIMYERLQESLSR 659
>BC111958-1|AAI11959.1| 710|Homo sapiens ral guanine nucleotide
dissociation stimulator-like 3 protein.
Length = 710
Score = 32.7 bits (71), Expect = 1.8
Identities = 33/114 (28%), Positives = 51/114 (44%), Gaps = 6/114 (5%)
Frame = -1
Query: 676 EVRAPLRVRQRHPQVRDVRADPAAEPRLRNQLQIPNKTRELQGARVLQRA-----TSPRS 512
E+ A ++ QR Q + P L Q Q+ + + + +RV++ +SPR
Sbjct: 457 EILARIQQLQRRCQSYTLSPHPPILAALHAQNQLTEE-QSYRLSRVIEPPAASCPSSPRI 515
Query: 511 RRR-GVTTTCTAKLCLARDLGASPPSR*TRTNVLSVCPACRPTTPTWRLAPAGS 353
RRR +T +AKL + S + SV P P++P R APAGS
Sbjct: 516 RRRISLTKRLSAKLAREKSSSPSGSPGDPSSPTSSVSPGSPPSSPRSRDAPAGS 569
>BC101756-1|AAI01757.1| 710|Homo sapiens ral guanine nucleotide
dissociation stimulator-like 3 protein.
Length = 710
Score = 32.7 bits (71), Expect = 1.8
Identities = 33/114 (28%), Positives = 51/114 (44%), Gaps = 6/114 (5%)
Frame = -1
Query: 676 EVRAPLRVRQRHPQVRDVRADPAAEPRLRNQLQIPNKTRELQGARVLQRA-----TSPRS 512
E+ A ++ QR Q + P L Q Q+ + + + +RV++ +SPR
Sbjct: 457 EILARIQQLQRRCQSYTLSPHPPILAALHAQNQLTEE-QSYRLSRVIEPPAASCPSSPRI 515
Query: 511 RRR-GVTTTCTAKLCLARDLGASPPSR*TRTNVLSVCPACRPTTPTWRLAPAGS 353
RRR +T +AKL + S + SV P P++P R APAGS
Sbjct: 516 RRRISLTKRLSAKLAREKSSSPSGSPGDPSSPTSSVSPGSPPSSPRSRDAPAGS 569
>AK074082-1|BAB84908.1| 497|Homo sapiens FLJ00153 protein protein.
Length = 497
Score = 32.7 bits (71), Expect = 1.8
Identities = 33/114 (28%), Positives = 51/114 (44%), Gaps = 6/114 (5%)
Frame = -1
Query: 676 EVRAPLRVRQRHPQVRDVRADPAAEPRLRNQLQIPNKTRELQGARVLQRA-----TSPRS 512
E+ A ++ QR Q + P L Q Q+ + + + +RV++ +SPR
Sbjct: 254 EILARIQQLQRRCQSYTLSPHPPILAALHAQNQLTEE-QSYRLSRVIEPPAASCPSSPRI 312
Query: 511 RRR-GVTTTCTAKLCLARDLGASPPSR*TRTNVLSVCPACRPTTPTWRLAPAGS 353
RRR +T +AKL + S + SV P P++P R APAGS
Sbjct: 313 RRRISLTKRLSAKLAREKSSSPSGSPGDPSSPTSSVSPGSPPSSPRSRDAPAGS 366
>Y18314-1|CAB48398.1| 797|Homo sapiens paraplegin-like protein
protein.
Length = 797
Score = 32.3 bits (70), Expect = 2.4
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -2
Query: 879 IAKVTQGFSGADLTEICQRACKLAIRQAXEA 787
+A +T GFSGAD+ +C A +A R ++
Sbjct: 509 LASLTPGFSGADVANVCNEAALIAARHLSDS 539
>BC065016-1|AAH65016.1| 797|Homo sapiens AFG3 ATPase family gene
3-like 2 (yeast) protein.
Length = 797
Score = 32.3 bits (70), Expect = 2.4
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -2
Query: 879 IAKVTQGFSGADLTEICQRACKLAIRQAXEA 787
+A +T GFSGAD+ +C A +A R ++
Sbjct: 509 LASLTPGFSGADVANVCNEAALIAARHLSDS 539
>BC024282-1|AAH24282.1| 812|Homo sapiens Similar to AFG3 ATPase
family gene 3-like 2 (yeast) protein.
Length = 812
Score = 32.3 bits (70), Expect = 2.4
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -2
Query: 879 IAKVTQGFSGADLTEICQRACKLAIRQAXEA 787
+A +T GFSGAD+ +C A +A R ++
Sbjct: 524 LASLTPGFSGADVANVCNEAALIAARHLSDS 554
>Y16610-1|CAA76314.1| 795|Homo sapiens paraplegin protein.
Length = 795
Score = 31.5 bits (68), Expect = 4.2
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -2
Query: 879 IAKVTQGFSGADLTEICQRACKLAIRQ 799
+A++T GFSGAD+ IC A A R+
Sbjct: 509 LAELTPGFSGADIANICNEAALHAARE 535
>BC036104-1|AAH36104.1| 795|Homo sapiens spastic paraplegia 7 (pure
and complicated autosomal recessive) protein.
Length = 795
Score = 31.5 bits (68), Expect = 4.2
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -2
Query: 879 IAKVTQGFSGADLTEICQRACKLAIRQ 799
+A++T GFSGAD+ IC A A R+
Sbjct: 509 LAELTPGFSGADIANICNEAALHAARE 535
>BC035929-1|AAH35929.1| 732|Homo sapiens SPG7 protein protein.
Length = 732
Score = 31.5 bits (68), Expect = 4.2
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -2
Query: 879 IAKVTQGFSGADLTEICQRACKLAIRQ 799
+A++T GFSGAD+ IC A A R+
Sbjct: 446 LAELTPGFSGADIANICNEAALHAARE 472
>BC034491-1|AAH34491.1| 406|Homo sapiens chromosome 12 open reading
frame 12 protein.
Length = 406
Score = 31.5 bits (68), Expect = 4.2
Identities = 26/75 (34%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Frame = +2
Query: 389 GATRRTNRQDVSSGLSRWWRCPEVASETQFSCTGRR-HPPPPGTWAGRPLKYPCPL*LPR 565
G R+ +Q G +W P V S + C G PPPPG W K+PCP+ + R
Sbjct: 61 GPPRKQPKQQHGPG---FWFQPPVCSN--WGCWGGPWRPPPPGFW-----KFPCPVQVFR 110
Query: 566 FVGNLKLVPKPRLCC 610
G L P CC
Sbjct: 111 VYG---LHPLCFCCC 122
>BC027600-1|AAH27600.1| 406|Homo sapiens chromosome 12 open reading
frame 12 protein.
Length = 406
Score = 31.5 bits (68), Expect = 4.2
Identities = 26/75 (34%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Frame = +2
Query: 389 GATRRTNRQDVSSGLSRWWRCPEVASETQFSCTGRR-HPPPPGTWAGRPLKYPCPL*LPR 565
G R+ +Q G +W P V S + C G PPPPG W K+PCP+ + R
Sbjct: 61 GPPRKQPKQQHGPG---FWFQPPVCSN--WGCWGGPWRPPPPGFW-----KFPCPVQVFR 110
Query: 566 FVGNLKLVPKPRLCC 610
G L P CC
Sbjct: 111 VYG---LHPLCFCCC 122
>BC026075-1|AAH26075.1| 406|Homo sapiens chromosome 12 open reading
frame 12 protein.
Length = 406
Score = 31.5 bits (68), Expect = 4.2
Identities = 26/75 (34%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Frame = +2
Query: 389 GATRRTNRQDVSSGLSRWWRCPEVASETQFSCTGRR-HPPPPGTWAGRPLKYPCPL*LPR 565
G R+ +Q G +W P V S + C G PPPPG W K+PCP+ + R
Sbjct: 61 GPPRKQPKQQHGPG---FWFQPPVCSN--WGCWGGPWRPPPPGFW-----KFPCPVQVFR 110
Query: 566 FVGNLKLVPKPRLCC 610
G L P CC
Sbjct: 111 VYG---LHPLCFCCC 122
>BC024183-1|AAH24183.1| 406|Homo sapiens chromosome 12 open reading
frame 12 protein.
Length = 406
Score = 31.5 bits (68), Expect = 4.2
Identities = 26/75 (34%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Frame = +2
Query: 389 GATRRTNRQDVSSGLSRWWRCPEVASETQFSCTGRR-HPPPPGTWAGRPLKYPCPL*LPR 565
G R+ +Q G +W P V S + C G PPPPG W K+PCP+ + R
Sbjct: 61 GPPRKQPKQQHGPG---FWFQPPVCSN--WGCWGGPWRPPPPGFW-----KFPCPVQVFR 110
Query: 566 FVGNLKLVPKPRLCC 610
G L P CC
Sbjct: 111 VYG---LHPLCFCCC 122
>AF080525-1|AAD28099.1| 795|Homo sapiens paraplegin protein.
Length = 795
Score = 31.5 bits (68), Expect = 4.2
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -2
Query: 879 IAKVTQGFSGADLTEICQRACKLAIRQ 799
+A++T GFSGAD+ IC A A R+
Sbjct: 509 LAELTPGFSGADIANICNEAALHAARE 535
>D78275-1|BAA11338.1| 389|Homo sapiens proteasome subunit p42
protein.
Length = 389
Score = 31.1 bits (67), Expect = 5.5
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -2
Query: 879 IAKVTQGFSGADLTEICQRACKLAIR 802
I K++ GF+GADL +C A AIR
Sbjct: 331 IVKLSDGFNGADLRNVCTEAGMFAIR 356
>CR456709-1|CAG32990.1| 389|Homo sapiens PSMC6 protein.
Length = 389
Score = 31.1 bits (67), Expect = 5.5
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -2
Query: 879 IAKVTQGFSGADLTEICQRACKLAIR 802
I K++ GF+GADL +C A AIR
Sbjct: 331 IVKLSDGFNGADLRNVCTEAGMFAIR 356
>BT006843-1|AAP35489.1| 389|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 6 protein.
Length = 389
Score = 31.1 bits (67), Expect = 5.5
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -2
Query: 879 IAKVTQGFSGADLTEICQRACKLAIR 802
I K++ GF+GADL +C A AIR
Sbjct: 331 IVKLSDGFNGADLRNVCTEAGMFAIR 356
>BC005390-1|AAH05390.1| 389|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 6 protein.
Length = 389
Score = 31.1 bits (67), Expect = 5.5
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -2
Query: 879 IAKVTQGFSGADLTEICQRACKLAIR 802
I K++ GF+GADL +C A AIR
Sbjct: 331 IVKLSDGFNGADLRNVCTEAGMFAIR 356
>AF006305-1|AAB61616.1| 389|Homo sapiens 26S proteasome regulatory
subunit protein.
Length = 389
Score = 31.1 bits (67), Expect = 5.5
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -2
Query: 879 IAKVTQGFSGADLTEICQRACKLAIR 802
I K++ GF+GADL +C A AIR
Sbjct: 331 IVKLSDGFNGADLRNVCTEAGMFAIR 356
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,367,228
Number of Sequences: 237096
Number of extensions: 2594551
Number of successful extensions: 6836
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 6313
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6812
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11270645666
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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