Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_H02
         (614 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119213-1|AAM51073.1|  506|Drosophila melanogaster SD15934p pro...   261   5e-70
AE014134-3092|AAF53797.1|  506|Drosophila melanogaster CG9987-PA...   261   5e-70

>AY119213-1|AAM51073.1|  506|Drosophila melanogaster SD15934p
           protein.
          Length = 506

 Score =  261 bits (640), Expect = 5e-70
 Identities = 120/136 (88%), Positives = 131/136 (96%)
 Frame = -2

Query: 610 LLVHRKGSXRAFPPNHPLIPVDYQLTGQPVLIGGTMGTCSYVLTGTHQGMTETFGSTCHG 431
           LLVHRKGS RAFPP+HPLIPVDYQLTGQPVL+GGTMGTCSYVLTGT QGM ETFGSTCHG
Sbjct: 371 LLVHRKGSTRAFPPHHPLIPVDYQLTGQPVLVGGTMGTCSYVLTGTEQGMQETFGSTCHG 430

Query: 430 AGRALSRAKSRRNIDYKEVLNKLETMGISIRVASPKLVMEEAPESYKNVTDVVDTCHAAG 251
           AGRALSRAKSRRN+DYK+VL+KL+ +GI+IRVASPKLVMEEAPESYK+VTDVVDTCHAAG
Sbjct: 431 AGRALSRAKSRRNLDYKDVLDKLDQLGIAIRVASPKLVMEEAPESYKDVTDVVDTCHAAG 490

Query: 250 ISKKTVKLRPIAVIKG 203
           ISKK +K+RPIAVIKG
Sbjct: 491 ISKKCIKMRPIAVIKG 506


>AE014134-3092|AAF53797.1|  506|Drosophila melanogaster CG9987-PA
           protein.
          Length = 506

 Score =  261 bits (640), Expect = 5e-70
 Identities = 120/136 (88%), Positives = 131/136 (96%)
 Frame = -2

Query: 610 LLVHRKGSXRAFPPNHPLIPVDYQLTGQPVLIGGTMGTCSYVLTGTHQGMTETFGSTCHG 431
           LLVHRKGS RAFPP+HPLIPVDYQLTGQPVL+GGTMGTCSYVLTGT QGM ETFGSTCHG
Sbjct: 371 LLVHRKGSTRAFPPHHPLIPVDYQLTGQPVLVGGTMGTCSYVLTGTEQGMQETFGSTCHG 430

Query: 430 AGRALSRAKSRRNIDYKEVLNKLETMGISIRVASPKLVMEEAPESYKNVTDVVDTCHAAG 251
           AGRALSRAKSRRN+DYK+VL+KL+ +GI+IRVASPKLVMEEAPESYK+VTDVVDTCHAAG
Sbjct: 431 AGRALSRAKSRRNLDYKDVLDKLDQLGIAIRVASPKLVMEEAPESYKDVTDVVDTCHAAG 490

Query: 250 ISKKTVKLRPIAVIKG 203
           ISKK +K+RPIAVIKG
Sbjct: 491 ISKKCIKMRPIAVIKG 506


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,243,951
Number of Sequences: 53049
Number of extensions: 419934
Number of successful extensions: 1030
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1001
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1030
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2517878700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)