Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_G24
         (726 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0591 - 19051748-19051807,19053044-19053133,19053238-190533...    48   8e-06
12_02_0669 + 21695391-21697443,21698319-21699030,21699169-21699775     36   0.025
01_06_0055 + 26030562-26032571                                         29   3.8  
08_01_0838 - 8185083-8185910                                           28   6.6  
02_01_0331 + 2331774-2331985,2332825-2332952,2333392-2333452,233...    28   6.6  
03_05_1064 - 30058253-30058467,30058549-30058762,30058846-300589...    28   8.7  

>08_02_0591 -
           19051748-19051807,19053044-19053133,19053238-19053363,
           19053920-19054104,19054644-19054818,19057111-19057191,
           19057242-19057265,19057581-19057753,19057847-19058123,
           19059093-19059149,19059604-19059699
          Length = 447

 Score = 48.0 bits (109), Expect = 8e-06
 Identities = 47/170 (27%), Positives = 71/170 (41%), Gaps = 14/170 (8%)
 Frame = -1

Query: 726 QGLVAVKFDKNHGAXVELNCXTDFVAKXDKFQXMIEDAAIASFK---FAHTKLQAKGPIT 556
           +GL+A+  D+   A VELNC TDFVA+ D FQ ++    +  FK    A   L A+ P  
Sbjct: 168 EGLLAIAQDEKRAAVVELNCETDFVARNDVFQYLL--VLVRGFKASSLAKLALSARDPGE 225

Query: 555 XM------ELDSEQLGTLHAE--GGKKLSEILALFIGSVGENAVLRRAECWKANSEDVKI 400
            +       L++  +   H +  G   +   +      VGEN   RR       +  V +
Sbjct: 226 LVFPFGPDYLENLNVNLDHPKLSGETTVQSAVTEVAAMVGENVKFRRGFIMSTTAHGV-V 284

Query: 399 AGYTHPAPXXXXXXXSGKYGALLA--YKQPND-VEDIGRQLCQHIVGCAP 259
             Y H  P       +G    L A     P D ++ +G+ +  HIV   P
Sbjct: 285 CSYMHTCPQPGLGRLAGLI-TLEAEDSNAPLDALQRVGKSIAMHIVATKP 333


>12_02_0669 + 21695391-21697443,21698319-21699030,21699169-21699775
          Length = 1123

 Score = 36.3 bits (80), Expect = 0.025
 Identities = 13/32 (40%), Positives = 22/32 (68%)
 Frame = -1

Query: 702 DKNHGAXVELNCXTDFVAKXDKFQXMIEDAAI 607
           D   G  +E+NC TDFV++ D F+ +++D A+
Sbjct: 751 DSRIGVLIEVNCETDFVSRGDIFKELVDDLAM 782



 Score = 35.9 bits (79), Expect = 0.033
 Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
 Frame = -1

Query: 726  QGLVAVKFDKNH-GAXVELNCXTDFVAKXDKFQXMIEDAAI 607
            +GL+      N  G  +E+N  TDFVA+ +KF+ ++ D A+
Sbjct: 983  EGLIGAYIHDNRIGCMIEINSETDFVARNEKFKELVNDLAM 1023


>01_06_0055 + 26030562-26032571
          Length = 669

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = -1

Query: 345 YGALLAYKQPNDVEDIGRQLCQHIVGCAPTKIG 247
           +G+LLA  + +   D+G+ + QHIV  AP  +G
Sbjct: 596 WGSLLAACRVHHRMDLGKVIGQHIVNVAPNDVG 628


>08_01_0838 - 8185083-8185910
          Length = 275

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = -1

Query: 255 KIGDKEKDKPAKNSDDETCLIFQEYLLDPSYTI 157
           K+GD E+++     ++E C  F E  +DP + +
Sbjct: 104 KLGDAEEEEDDDEDEEEKCRRFAEKCIDPYFIV 136


>02_01_0331 + 2331774-2331985,2332825-2332952,2333392-2333452,
            2333878-2334035,2335001-2335083,2336364-2336468,
            2336659-2336756,2337136-2337256,2337366-2337416,
            2337987-2338179,2338277-2338845,2338964-2339017,
            2339250-2339412,2340155-2340417,2340530-2340717,
            2341875-2341945,2342021-2342309,2343962-2344027,
            2344186-2344303,2344468-2344575,2344656-2344805,
            2344892-2345065,2345161-2345232
          Length = 1164

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = -1

Query: 315  NDVEDIGRQLCQHIVGCAPTKIGDKEKDKPAKNSDDETC 199
            ND +++ R        C P ++G+  K+    +SDD+ C
Sbjct: 933  NDSKELERVFAAIAQQCCPNRVGNSGKNLLLPSSDDDAC 971


>03_05_1064 -
           30058253-30058467,30058549-30058762,30058846-30058936,
           30059361-30059617,30059702-30059902,30059975-30060065,
           30060510-30060573,30060754-30061021,30061118-30061249
          Length = 510

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 28/106 (26%), Positives = 49/106 (46%), Gaps = 5/106 (4%)
 Frame = -1

Query: 702 DKNHGAXVELNCXTDFVAKXDKF-QXMIEDAAIASFKFAHTKLQAKGPITXMELDSEQLG 526
           D N G  +E    +D  A+  K     +  AA  +  F  T L    P   ++  + +L 
Sbjct: 303 DSNKGKKIEA-ADSDSDAEMKKLCDSSVSKAAKMAAGFT-TALGGLSPNEIVKRTTNRLE 360

Query: 525 TLHAEGGKKLSEILALFIGS---VGENAVLRRAECWKANSE-DVKI 400
           T+H+EG  +LSE+  L +     +G++ +   ++    + E DVKI
Sbjct: 361 TIHSEGVHRLSEMCCLAVSQLLLLGKSVISASSKPKNEDDENDVKI 406


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,481,895
Number of Sequences: 37544
Number of extensions: 414776
Number of successful extensions: 1263
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1188
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1263
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1898162308
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)