Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_G18
         (662 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81560-2|CAB04547.1| 1021|Caenorhabditis elegans Hypothetical pr...    31   0.96 
Z81540-5|CAB04405.2|  946|Caenorhabditis elegans Hypothetical pr...    30   1.7  
AL023835-5|CAA19490.1|  471|Caenorhabditis elegans Hypothetical ...    29   3.9  
U21323-9|AAA62553.1|  971|Caenorhabditis elegans Hypothetical pr...    28   5.1  
AF016663-5|AAC70880.1|  864|Caenorhabditis elegans Hypothetical ...    28   6.8  

>Z81560-2|CAB04547.1| 1021|Caenorhabditis elegans Hypothetical
           protein K02E2.2 protein.
          Length = 1021

 Score = 30.7 bits (66), Expect = 0.96
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +1

Query: 571 THCESS*ERGNPCCRRPSAASRGDAV 648
           THCE     GN CC  P A++  DA+
Sbjct: 253 THCEKERRDGNKCCSGPLASTMRDAM 278


>Z81540-5|CAB04405.2|  946|Caenorhabditis elegans Hypothetical
           protein F46B3.5 protein.
          Length = 946

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = +1

Query: 571 THCESS*ERGNPCCRRPSAASRGDAV 648
           THCES    GN CC    AA+  DA+
Sbjct: 269 THCESGKRDGNKCCDARLAATMRDAM 294


>AL023835-5|CAA19490.1|  471|Caenorhabditis elegans Hypothetical
           protein Y37A1B.5 protein.
          Length = 471

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
 Frame = -1

Query: 659 GAPGTASPRDAAEGRRQQG-FPLSQLDSQ*V*ILLPFEARVTNYNVCTVIFEVNIPYIYK 483
           G PG ASP DA +G R++  F  +   +     +   +    +   C VI  V++P+I  
Sbjct: 11  GGPGYASPADAIKGPREEVLFVTAPNAADGPDAIFTVDVNPESDTFCQVISRVDVPHIGD 70

Query: 482 SVY 474
            V+
Sbjct: 71  EVH 73


>U21323-9|AAA62553.1|  971|Caenorhabditis elegans Hypothetical
           protein C45G9.10a protein.
          Length = 971

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = -3

Query: 99  DKCRLGTVNSYILKIRSKRXKVNIWLLHELL 7
           D C  G +   ILKI S    V++W ++E++
Sbjct: 22  DNCNNGLLTDKILKITSPHGNVSVWDINEVI 52


>AF016663-5|AAC70880.1|  864|Caenorhabditis elegans Hypothetical
           protein F21E9.5 protein.
          Length = 864

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = +2

Query: 350 DESSPFTPFHRNMSIPRQR 406
           D S+ FTPFH+N+++P  R
Sbjct: 502 DCSTTFTPFHKNVTVPVTR 520


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,764,799
Number of Sequences: 27780
Number of extensions: 271992
Number of successful extensions: 458
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 452
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 458
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1486926498
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)