Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_G17
         (699 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L41642-1|AAA85085.1|  773|Drosophila melanogaster lin19 protein ...    29   4.6  
BT010290-1|AAQ23608.1|  774|Drosophila melanogaster LD20253p pro...    29   4.6  
AF136343-1|AAD33676.1|  774|Drosophila melanogaster Cul-1 protein.     29   4.6  
AE013599-533|AAM68872.1|  774|Drosophila melanogaster CG1877-PD,...    29   4.6  
AE013599-532|AAM68871.1|  774|Drosophila melanogaster CG1877-PC,...    29   4.6  
AE013599-531|AAF59175.1|  774|Drosophila melanogaster CG1877-PB,...    29   4.6  
AE013599-530|AAF59174.1|  774|Drosophila melanogaster CG1877-PA,...    29   4.6  

>L41642-1|AAA85085.1|  773|Drosophila melanogaster lin19 protein
           protein.
          Length = 773

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 15/46 (32%), Positives = 23/46 (50%)
 Frame = -3

Query: 643 LMQYFTHNLDMCTKFYMKLIIKYAIHVFDYCLLIAVTT*GQS*FKT 506
           +MQ F H   +    YM+    +  HV+DYC  ++    G+S  KT
Sbjct: 27  IMQVFEHEKSLTRSQYMR----FYTHVYDYCTSVSAAPSGRSSGKT 68


>BT010290-1|AAQ23608.1|  774|Drosophila melanogaster LD20253p
           protein.
          Length = 774

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 15/46 (32%), Positives = 23/46 (50%)
 Frame = -3

Query: 643 LMQYFTHNLDMCTKFYMKLIIKYAIHVFDYCLLIAVTT*GQS*FKT 506
           +MQ F H   +    YM+    +  HV+DYC  ++    G+S  KT
Sbjct: 27  IMQVFEHEKSLTRSQYMR----FYTHVYDYCTSVSAAPSGRSSGKT 68


>AF136343-1|AAD33676.1|  774|Drosophila melanogaster Cul-1 protein.
          Length = 774

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 15/46 (32%), Positives = 23/46 (50%)
 Frame = -3

Query: 643 LMQYFTHNLDMCTKFYMKLIIKYAIHVFDYCLLIAVTT*GQS*FKT 506
           +MQ F H   +    YM+    +  HV+DYC  ++    G+S  KT
Sbjct: 27  IMQVFEHEKSLTRSQYMR----FYTHVYDYCTSVSAAPSGRSSGKT 68


>AE013599-533|AAM68872.1|  774|Drosophila melanogaster CG1877-PD,
           isoform D protein.
          Length = 774

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 15/46 (32%), Positives = 23/46 (50%)
 Frame = -3

Query: 643 LMQYFTHNLDMCTKFYMKLIIKYAIHVFDYCLLIAVTT*GQS*FKT 506
           +MQ F H   +    YM+    +  HV+DYC  ++    G+S  KT
Sbjct: 27  IMQVFEHEKSLTRSQYMR----FYTHVYDYCTSVSAAPSGRSSGKT 68


>AE013599-532|AAM68871.1|  774|Drosophila melanogaster CG1877-PC,
           isoform C protein.
          Length = 774

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 15/46 (32%), Positives = 23/46 (50%)
 Frame = -3

Query: 643 LMQYFTHNLDMCTKFYMKLIIKYAIHVFDYCLLIAVTT*GQS*FKT 506
           +MQ F H   +    YM+    +  HV+DYC  ++    G+S  KT
Sbjct: 27  IMQVFEHEKSLTRSQYMR----FYTHVYDYCTSVSAAPSGRSSGKT 68


>AE013599-531|AAF59175.1|  774|Drosophila melanogaster CG1877-PB,
           isoform B protein.
          Length = 774

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 15/46 (32%), Positives = 23/46 (50%)
 Frame = -3

Query: 643 LMQYFTHNLDMCTKFYMKLIIKYAIHVFDYCLLIAVTT*GQS*FKT 506
           +MQ F H   +    YM+    +  HV+DYC  ++    G+S  KT
Sbjct: 27  IMQVFEHEKSLTRSQYMR----FYTHVYDYCTSVSAAPSGRSSGKT 68


>AE013599-530|AAF59174.1|  774|Drosophila melanogaster CG1877-PA,
           isoform A protein.
          Length = 774

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 15/46 (32%), Positives = 23/46 (50%)
 Frame = -3

Query: 643 LMQYFTHNLDMCTKFYMKLIIKYAIHVFDYCLLIAVTT*GQS*FKT 506
           +MQ F H   +    YM+    +  HV+DYC  ++    G+S  KT
Sbjct: 27  IMQVFEHEKSLTRSQYMR----FYTHVYDYCTSVSAAPSGRSSGKT 68


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,992,730
Number of Sequences: 53049
Number of extensions: 433271
Number of successful extensions: 776
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 740
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 776
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)