Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_pT_G12
(770 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F5.10 |||ATP-dependent RNA helicase, eIF4A related|Schizosa... 368 e-103
SPAC1006.07 |||translation initiation factor eIF4A|Schizosacchar... 343 2e-95
SPAC17G6.14c |uap56||ATP-dependent RNA helicase Uap56|Schizosacc... 164 1e-41
SPBC12C2.06 |||ATP-dependent RNA helicase Dbp5|Schizosaccharomyc... 163 2e-41
SPBC776.09 |ste13||ATP-dependent RNA helicase Ste13|Schizosaccha... 151 1e-37
SPCC1795.11 |sum3|ded1, slh3, moc2|ATP-dependent RNA helicase Su... 128 7e-31
SPBP8B7.16c |dbp2||ATP-dependent RNA helicase Dbp2|Schizosacchar... 128 7e-31
SPCC10H11.01 |prp11||ATP-dependent RNA helicase Prp11|Schizosacc... 125 6e-30
SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10 |Schizosac... 97 7e-26
SPCC63.11 |prp28||U5 snRNP-associated protein Prp28 |Schizosacch... 109 3e-25
SPAC22F3.08c |rok1||ATP-dependent RNA helicase Rok1 |Schizosacch... 108 1e-24
SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1 |Schizosacch... 107 2e-24
SPBC543.06c |dbp8||ATP-dependent RNA helicase Dbp8 |Schizosaccha... 101 9e-23
SPAC823.08c |||ATP-dependent RNA helicase Rrp3 |Schizosaccharomy... 100 2e-22
SPBC17D1.06 |dbp3||ATP-dependent RNA helicase Dbp3 |Schizosaccha... 98 1e-21
SPAC1093.05 |||ATP-dependent RNA helicase Hca4 |Schizosaccharomy... 82 7e-17
SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomy... 80 3e-16
SPBC21H7.04 |||ATP-dependent RNA helicase Dbp7 |Schizosaccharomy... 74 3e-14
SPBC24C6.02 |||ATP-dependent RNA helicase Spb4 |Schizosaccharomy... 73 5e-14
SPBC4F6.07c |||ATP-dependent RNA helicase Mak5 |Schizosaccharomy... 73 5e-14
SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces pom... 72 8e-14
SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharom... 72 8e-14
SPBC691.04 |||mitochondrial ATP-dependent RNA helicase Mss116 |S... 71 2e-13
SPCC285.03 |||ATP-dependent RNA helicase Dbp6|Schizosaccharomyce... 69 7e-13
SPCC1494.06c |||ATP-dependent RNA helicase Dbp9 |Schizosaccharom... 58 1e-09
SPAC2G11.12 |rqh1|hus2, rad12, rec9|RecQ type DNA helicase Rqh1|... 55 1e-08
SPAC9.05 |mfh1||ATP-dependent DNA helicase Mfh1 |Schizosaccharom... 48 1e-06
SPAC20H4.04 |mfh2||ATP-dependent 3' to 5' DNA helicase |Schizosa... 44 3e-05
SPCC188.13c |dcr1|SPCC584.10c|dicer|Schizosaccharomyces pombe|ch... 38 0.002
SPAC23A1.19c ||SPAC26H5.01c|RecQ type DNA helicase Hrq1 |Schizos... 35 0.011
SPBC11C11.11c ||SPBC3B8.12|ATP-dependent DNA helicase Irc3 |Schi... 31 0.24
SPCC23B6.03c |tel1||ATM checkpoint kinase|Schizosaccharomyces po... 29 0.97
SPAC25A8.01c ||snf2SR|fun thirty related protein Fft3|Schizosacc... 29 0.97
SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|... 28 1.3
SPAC3H1.10 |||phytochelatin synthetase |Schizosaccharomyces pomb... 27 3.0
SPAC20H4.01 ||SPAC631.03|U3 snoRNP-associated protein Utp5|Schiz... 27 3.9
SPAC17A5.16 |||human down-regulated in multiple cancers-1 homolo... 27 3.9
SPAC1786.01c ||SPAC31G5.20c|triacylglycerol lipase|Schizosacchar... 26 5.2
SPBC19G7.05c |bgs1|cps1, drc1|1,3-beta-glucan synthase catalytic... 26 5.2
SPAC821.05 |||translation initiation factor eIF3h|Schizosaccharo... 26 5.2
SPAC15E1.04 |||thymidylate synthase |Schizosaccharomyces pombe|c... 25 9.1
SPBC11B10.05c |rsp1||random septum position protein Rsp1|Schizos... 25 9.1
>SPAC1F5.10 |||ATP-dependent RNA helicase, eIF4A
related|Schizosaccharomyces pombe|chr 1|||Manual
Length = 394
Score = 368 bits (906), Expect = e-103
Identities = 165/203 (81%), Positives = 191/203 (94%)
Frame = -3
Query: 768 PPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTL 589
PP TQVV++SATLP ++LEMT+KF T+P+RILVKRDELTLEG+KQ+F+AVE+EEWKFDTL
Sbjct: 192 PPGTQVVVVSATLPQDVLEMTNKFTTNPVRILVKRDELTLEGLKQYFIAVEKEEWKFDTL 251
Query: 588 CDLYDTLTITQAVIFCNTKRKVDWLTQKMQEANFTVSSMHGDMPQKERDNIMKEFRSGQS 409
CDLYDTLTITQAVIFCN++RKVDWLT+KM+EANFTV+SMHG+MPQKERD IM++FR G S
Sbjct: 252 CDLYDTLTITQAVIFCNSRRKVDWLTEKMREANFTVTSMHGEMPQKERDAIMQDFRQGNS 311
Query: 408 RVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIRI 229
RVLI TD+WARGIDVQQVSLVINYDLP NRE YIHRIGRSGRFGRKGVAINFV ++D+RI
Sbjct: 312 RVLICTDIWARGIDVQQVSLVINYDLPANRENYIHRIGRSGRFGRKGVAINFVTNEDVRI 371
Query: 228 LRDIEQYYSTQIDEMPMNVADLI 160
LRDIEQYYST IDEMPMN+ D++
Sbjct: 372 LRDIEQYYSTVIDEMPMNIGDMV 394
>SPAC1006.07 |||translation initiation factor
eIF4A|Schizosaccharomyces pombe|chr 1|||Manual
Length = 392
Score = 343 bits (842), Expect = 2e-95
Identities = 153/203 (75%), Positives = 185/203 (91%)
Frame = -3
Query: 768 PPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTL 589
PP QVVL+SAT+P ++LE+T+KFM DPIRILVK+DELTLEGIKQF+VAVE+EEWK DTL
Sbjct: 190 PPTAQVVLLSATMPQDVLEVTTKFMRDPIRILVKKDELTLEGIKQFYVAVEKEEWKLDTL 249
Query: 588 CDLYDTLTITQAVIFCNTKRKVDWLTQKMQEANFTVSSMHGDMPQKERDNIMKEFRSGQS 409
CDLY+T+T+TQAVIFCNT+RKVDWLT+++ E +FTVSSMHGDM Q +RD +M EFR+G S
Sbjct: 250 CDLYETVTVTQAVIFCNTRRKVDWLTEQLTERDFTVSSMHGDMDQAQRDTLMHEFRTGSS 309
Query: 408 RVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIRI 229
R+LITTD+ ARGIDVQQVSLVINYDLP NRE YIHRIGR GRFGRKGV+INFV +DD+R+
Sbjct: 310 RILITTDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVSINFVTNDDVRM 369
Query: 228 LRDIEQYYSTQIDEMPMNVADLI 160
+R+IEQ+Y+T I+EMPMN+ADLI
Sbjct: 370 MREIEQFYNTHIEEMPMNIADLI 392
>SPAC17G6.14c |uap56||ATP-dependent RNA helicase
Uap56|Schizosaccharomyces pombe|chr 1|||Manual
Length = 434
Score = 164 bits (398), Expect = 1e-41
Identities = 82/198 (41%), Positives = 129/198 (65%), Gaps = 2/198 (1%)
Frame = -3
Query: 768 PPATQVVLISATLPHEILEMTSKFMTDPIRILVKRD-ELTLEGIKQFFVAVEREEWKFDT 592
PP QV++ SATL +EI + KFM +P+ I V + +LTL G++Q +V +E E+ K
Sbjct: 227 PPQKQVMMFSATLSNEIRPICKKFMQNPLEIYVDDETKLTLHGLQQHYVKLE-EKAKNRK 285
Query: 591 LCDLYDTLTITQAVIFCNTKRKVDWLTQKMQEANFTVSSMHGDMPQKERDNIMKEFRSGQ 412
+ DL D+L Q VIF + + + L + ++E NF +HG +PQ+ER K F+
Sbjct: 286 INDLLDSLEFNQVVIFVKSVSRANELDRLLRECNFPSICIHGGLPQEERIKRYKAFKDFD 345
Query: 411 SRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKS-DDI 235
R+ + TDV+ RGID+++V++VINYD+P++ + Y+HR+GR+GRFG KG+AI F S +D
Sbjct: 346 KRICVATDVFGRGIDIERVNIVINYDMPDSPDSYLHRVGRAGRFGTKGLAITFSSSEEDS 405
Query: 234 RILRDIEQYYSTQIDEMP 181
+IL I++ + I E+P
Sbjct: 406 QILDKIQERFEVNITELP 423
>SPBC12C2.06 |||ATP-dependent RNA helicase Dbp5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 503
Score = 163 bits (397), Expect = 2e-41
Identities = 84/203 (41%), Positives = 127/203 (62%), Gaps = 7/203 (3%)
Frame = -3
Query: 768 PPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTL 589
P TQ+VL SAT + + +F + I +K +EL++EGIKQ ++ + EE K++ L
Sbjct: 284 PRNTQIVLFSATFSERVEKYAERFAPNANEIRLKTEELSVEGIKQLYMDCQSEEHKYNVL 343
Query: 588 CDLYDTLTITQAVIFCNTKRKVDWLTQKMQEANFTVSSMHGDMPQKERDNIMKEFRSGQS 409
+LY LTI Q++IFC K + + ++M TV+ + G++ +RD IM FR G S
Sbjct: 344 VELYGLLTIGQSIIFCKKKDTAEEIARRMTADGHTVACLTGNLEGAQRDAIMDSFRVGTS 403
Query: 408 RVLITTDVWARGIDVQQVSLVINYDLPNNR------ELYIHRIGRSGRFGRKGVAINFV- 250
+VL+TT+V ARGIDV QV+LV+NYD+P ++ + Y+HRIGR+GRFGR GV+INFV
Sbjct: 404 KVLVTTNVIARGIDVSQVNLVVNYDMPLDQAGRPDPQTYLHRIGRTGRFGRVGVSINFVH 463
Query: 249 KSDDIRILRDIEQYYSTQIDEMP 181
+ I++Y+ I +P
Sbjct: 464 DKKSWEEMNAIQEYFQRPITRVP 486
>SPBC776.09 |ste13||ATP-dependent RNA helicase
Ste13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 485
Score = 151 bits (366), Expect = 1e-37
Identities = 78/199 (39%), Positives = 115/199 (57%)
Frame = -3
Query: 768 PPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTL 589
P Q+ L SAT P + K + P I + DELTL G+ Q++ V+ E K L
Sbjct: 215 PKNRQISLYSATFPLIVKNFMDKHLNKPYEINLM-DELTLRGVTQYYAFVD-ESQKVHCL 272
Query: 588 CDLYDTLTITQAVIFCNTKRKVDWLTQKMQEANFTVSSMHGDMPQKERDNIMKEFRSGQS 409
L+ L I Q++IFCN+ +V+ L +K+ E ++ H M Q R+ + FR+G
Sbjct: 273 NTLFSKLQINQSIIFCNSTNRVELLAKKITELGYSCFYSHAKMLQSHRNRVFHNFRNGVC 332
Query: 408 RVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIRI 229
R L+ +D+ RGID+Q V++VIN+D P N E Y+HRIGRSGRFG +G+AI+F+ D
Sbjct: 333 RNLVCSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHRGLAISFISWADRFN 392
Query: 228 LRDIEQYYSTQIDEMPMNV 172
L IE T+I +P ++
Sbjct: 393 LYRIENELGTEIQPIPPSI 411
>SPCC1795.11 |sum3|ded1, slh3, moc2|ATP-dependent RNA helicase
Sum3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 636
Score = 128 bits (310), Expect = 7e-31
Identities = 72/193 (37%), Positives = 109/193 (56%), Gaps = 1/193 (0%)
Frame = -3
Query: 756 QVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLY 577
Q ++ SAT P +I + F+ D + + V R T E I Q V VE E K L D+
Sbjct: 366 QTLMFSATFPRDIQLLARDFLKDYVFLSVGRVGSTSENITQKVVHVEDSE-KRSYLLDIL 424
Query: 576 DTLTITQ-AVIFCNTKRKVDWLTQKMQEANFTVSSMHGDMPQKERDNIMKEFRSGQSRVL 400
TL +IF TKR D LT + +NF +S+HGD Q+ER+ ++ FRSG++ ++
Sbjct: 425 HTLPPEGLTLIFVETKRMADTLTDYLLNSNFPATSIHGDRTQRERERALELFRSGRTSIM 484
Query: 399 ITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIRILRD 220
+ T V +RG+D+ V+ VINYDLP + + Y+HRIGR+GR G G A+ F ++ I ++
Sbjct: 485 VATAVASRGLDIPNVTHVINYDLPTDIDDYVHRIGRTGRAGNTGQAVAFFNRNNKGIAKE 544
Query: 219 IEQYYSTQIDEMP 181
+ + E P
Sbjct: 545 LIELLQEANQECP 557
>SPBP8B7.16c |dbp2||ATP-dependent RNA helicase
Dbp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 550
Score = 128 bits (310), Expect = 7e-31
Identities = 67/186 (36%), Positives = 108/186 (58%), Gaps = 3/186 (1%)
Frame = -3
Query: 765 PATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLE-GIKQFFVAVEREEWKFDTL 589
P Q V+ SAT P E+ + ++ D I++ V +L IKQ V+ + +
Sbjct: 299 PDRQTVMFSATWPKEVQRLARDYLNDYIQVTVGSLDLAASHNIKQIVEVVDNADKRARLG 358
Query: 588 CDLYDTLTI--TQAVIFCNTKRKVDWLTQKMQEANFTVSSMHGDMPQKERDNIMKEFRSG 415
D+ + L + +IF TKR D +T+ +++ + ++HGD Q ERD ++ EFR+G
Sbjct: 359 KDIEEVLKDRDNKVLIFTGTKRVADDITRFLRQDGWPALAIHGDKAQDERDWVLNEFRTG 418
Query: 414 QSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDI 235
+S +++ TDV +RGIDV+ ++ V NYD P N E Y+HRIGR+GR G KG A + SD+
Sbjct: 419 KSPIMVATDVASRGIDVKGITHVFNYDFPGNTEDYVHRIGRTGRAGAKGTAYTYFTSDNA 478
Query: 234 RILRDI 217
+ R++
Sbjct: 479 KQAREL 484
>SPCC10H11.01 |prp11||ATP-dependent RNA helicase
Prp11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1014
Score = 125 bits (302), Expect = 6e-30
Identities = 67/205 (32%), Positives = 108/205 (52%), Gaps = 4/205 (1%)
Frame = -3
Query: 765 PATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLC 586
P Q VL SAT P + + K + P+ I V + ++Q V V EE KF L
Sbjct: 598 PDRQTVLFSATFPRAMEALARKVLKKPVEITVGGRSVVASEVEQI-VEVRPEESKFSRLL 656
Query: 585 DL----YDTLTITQAVIFCNTKRKVDWLTQKMQEANFTVSSMHGDMPQKERDNIMKEFRS 418
+L Y+ + ++F + + D L + + +T +S+HG Q +RD+ + ++++
Sbjct: 657 ELLGELYNNQLDVRTLVFVDRQESADALLSDLMKRGYTSNSIHGGKDQHDRDSTISDYKA 716
Query: 417 GQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDD 238
G VLI T V ARG+DV+ + LV+NYD PN+ E Y+HR+GR+GR G GVA+ F+ +
Sbjct: 717 GVFDVLIATSVVARGLDVKSLQLVVNYDCPNHMEDYVHRVGRTGRAGHTGVAVTFITPEQ 776
Query: 237 IRILRDIEQYYSTQIDEMPMNVADL 163
+ DI + +P + L
Sbjct: 777 EKYAVDIAKALKMSKQPVPKELQTL 801
>SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 848
Score = 97.5 bits (232), Expect(2) = 7e-26
Identities = 41/115 (35%), Positives = 78/115 (67%)
Frame = -3
Query: 552 VIFCNTKRKVDWLTQKMQEANFTVSSMHGDMPQKERDNIMKEFRSGQSRVLITTDVWARG 373
++F TK V+++++ + +A ++VS ++G + Q+ R N + FR G++ +L+ TDV +RG
Sbjct: 350 LVFVPTKHHVEYVSELLVQAGYSVSKIYGSLDQEARLNEINNFRLGKTNLLVVTDVASRG 409
Query: 372 IDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIRILRDIEQY 208
ID+ ++ VINYD P ++++HR+GR+ R GR G A + V+++D L D++ +
Sbjct: 410 IDIPLLANVINYDFPPQPKVFVHRVGRTARAGRTGWAYSLVRAEDAGYLLDLQLF 464
Score = 35.5 bits (78), Expect(2) = 7e-26
Identities = 17/69 (24%), Positives = 34/69 (49%)
Frame = -3
Query: 768 PPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTL 589
P + Q +L SATLP +++ + DP+ + + + ++ F +V+ E + L
Sbjct: 242 PTSRQTLLFSATLPRTLVDFAKAGLQDPVLVRLDVESKVSADLQSAFFSVKTAEREAALL 301
Query: 588 CDLYDTLTI 562
C L D + +
Sbjct: 302 CILQDIIKL 310
>SPCC63.11 |prp28||U5 snRNP-associated protein Prp28
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 109 bits (263), Expect = 3e-25
Identities = 48/181 (26%), Positives = 103/181 (56%), Gaps = 1/181 (0%)
Frame = -3
Query: 756 QVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLY 577
Q ++ SATLP + + ++ +P+ + + ++ ++Q + + K+ + ++
Sbjct: 451 QTIMFSATLPPRVANLAKSYLIEPVMLTIGNIGQAVDRVEQRVEMISDDSKKWRRVEEIL 510
Query: 576 DTLTITQAVI-FCNTKRKVDWLTQKMQEANFTVSSMHGDMPQKERDNIMKEFRSGQSRVL 400
++ + +I F N KR ++ + +++ + ++HG Q++R+ +++ R+ + +L
Sbjct: 511 ESNRFSPPIIIFVNLKRNIEAIAKQLNAIGWHAVTLHGSKSQEQRERAIEQLRNKTADIL 570
Query: 399 ITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIRILRD 220
+ TD+ RGID+ VSLV+NY++ + E Y HRIGR+GR G+ G AI F+ +D + D
Sbjct: 571 VATDIAGRGIDIPNVSLVLNYNMAKSIEDYTHRIGRTGRAGKSGTAITFLGPEDTDVYYD 630
Query: 219 I 217
+
Sbjct: 631 L 631
>SPAC22F3.08c |rok1||ATP-dependent RNA helicase Rok1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 481
Score = 108 bits (259), Expect = 1e-24
Identities = 60/171 (35%), Positives = 89/171 (52%), Gaps = 1/171 (0%)
Frame = -3
Query: 747 LISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTL 568
L SAT+P + E+ DPIRI+V + + I Q + V + K L +
Sbjct: 226 LFSATIPSRVEELAKVVTVDPIRIIVGLKDAATDSIDQRLLFVGSDTSKIVILRQMISNG 285
Query: 567 TIT-QAVIFCNTKRKVDWLTQKMQEANFTVSSMHGDMPQKERDNIMKEFRSGQSRVLITT 391
+ + VIF + L ++ V +HG++PQ +R+ + +FR G+ VLI T
Sbjct: 286 ELKPRVVIFVQDIERAKALYTELLFDEIHVGVIHGELPQAKREEALAKFRKGEIWVLIAT 345
Query: 390 DVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDD 238
D+ ARGID V +VIN+D P + YIHRIGR+GR G G A+ F +D
Sbjct: 346 DLLARGIDFHGVKMVINFDFPQSVHSYIHRIGRTGRAGNTGQAVTFFTKED 396
>SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 754
Score = 107 bits (256), Expect = 2e-24
Identities = 58/193 (30%), Positives = 103/193 (53%), Gaps = 2/193 (1%)
Frame = -3
Query: 768 PPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAV--EREEWKFD 595
P + Q +L SAT+ ++ ++ + P+R+ V + T + + Q FV V +RE +
Sbjct: 434 PKSRQTMLFSATMTDKVDDLIRLSLNRPVRVFVDNKKTTAKLLTQEFVRVRPQRELLRPA 493
Query: 594 TLCDLYDTLTITQAVIFCNTKRKVDWLTQKMQEANFTVSSMHGDMPQKERDNIMKEFRSG 415
L L L + +IF +K + + + +HG + Q++R +++FR G
Sbjct: 494 MLIYLCKELFHRRTIIFFRSKAFAHKMRVIFGLLSLNATEIHGSLSQEQRVRALEDFRDG 553
Query: 414 QSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDI 235
+ L+ TDV +RGID++ + +VINY+ P E+Y+HR+GR+ R GR G AI D
Sbjct: 554 KCNYLLATDVASRGIDIKGIEVVINYEAPATHEVYLHRVGRTARAGRSGRAITLAGEGDR 613
Query: 234 RILRDIEQYYSTQ 196
++L+ + + S Q
Sbjct: 614 KVLKGVFKNSSAQ 626
>SPBC543.06c |dbp8||ATP-dependent RNA helicase Dbp8
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 453
Score = 101 bits (243), Expect = 9e-23
Identities = 46/123 (37%), Positives = 76/123 (61%)
Frame = -3
Query: 555 AVIFCNTKRKVDWLTQKMQEANFTVSSMHGDMPQKERDNIMKEFRSGQSRVLITTDVWAR 376
A+IF N R + + ++ V+ +H +M Q+ER N + FR+ +++L+ TDV +R
Sbjct: 261 AIIFVNRTRTAELIYSILRLLELRVTELHSEMVQRERINSLGRFRAEAAKILVATDVASR 320
Query: 375 GIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIRILRDIEQYYSTQ 196
G+D+ V LVIN+DLP + + YIHR+GR+ R GR G +I+ V D+ ++ IE T+
Sbjct: 321 GLDIPSVQLVINFDLPRDPDDYIHRVGRTARAGRSGESISIVTERDVDLVHAIEDRVGTK 380
Query: 195 IDE 187
+ E
Sbjct: 381 LSE 383
>SPAC823.08c |||ATP-dependent RNA helicase Rrp3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 465
Score = 100 bits (240), Expect = 2e-22
Identities = 57/194 (29%), Positives = 96/194 (49%)
Frame = -3
Query: 768 PPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTL 589
P + +L SAT+ ++ ++ + P+R+ V T++ + Q ++ + K L
Sbjct: 218 PHERRTLLFSATMTSKVEKLQRASLHQPVRVAVSSKFSTVDTLIQRYLFFPFKH-KDTYL 276
Query: 588 CDLYDTLTITQAVIFCNTKRKVDWLTQKMQEANFTVSSMHGDMPQKERDNIMKEFRSGQS 409
L + L +IF T L ++ F+ +HG + Q R + +F+SG
Sbjct: 277 VYLVNELAGNSIIIFARTVNDTQRLAILLRTLGFSAIPLHGQLSQSNRLGALNKFKSGAR 336
Query: 408 RVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIRI 229
L+ TDV ARG+D+ V +VINYD+P + + YIHR+GR+ R GR G +I V D+
Sbjct: 337 STLVATDVAARGLDIPLVDVVINYDIPTDSKAYIHRVGRTARAGRAGKSIALVTQYDLEP 396
Query: 228 LRDIEQYYSTQIDE 187
IE ++ E
Sbjct: 397 FLRIEATIGKKMQE 410
>SPBC17D1.06 |dbp3||ATP-dependent RNA helicase Dbp3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 578
Score = 98.3 bits (234), Expect = 1e-21
Identities = 62/179 (34%), Positives = 91/179 (50%), Gaps = 6/179 (3%)
Frame = -3
Query: 756 QVVLISATLPHEILEMTSKFMTDPIRILVKRDELTL-EGIKQFFVAVE---REEWKFDTL 589
Q V SAT P + + + F+ DP++I + DEL + I Q ++ +E D L
Sbjct: 347 QTVFFSATWPESVRALAATFLKDPVKITIGSDELAASQNITQIVEILDDPRSKERMLDNL 406
Query: 588 C--DLYDTLTITQAVIFCNTKRKVDWLTQKMQEANFTVSSMHGDMPQKERDNIMKEFRSG 415
L + +IF K++ + + + V +HGDM Q R + +F+SG
Sbjct: 407 LRKHLSSGGKDDKILIFVLYKKEAARVEGTLAR-KYNVVGIHGDMSQGARLQALNDFKSG 465
Query: 414 QSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDD 238
+ VL+ TDV ARG+D+ +V LVIN P E Y+HRIGR+GR KG AI F D
Sbjct: 466 KCPVLVATDVAARGLDIPKVQLVINVTFPLTIEDYVHRIGRTGRANTKGTAITFFTPQD 524
>SPAC1093.05 |||ATP-dependent RNA helicase Hca4 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 735
Score = 82.2 bits (194), Expect = 7e-17
Identities = 57/205 (27%), Positives = 98/205 (47%), Gaps = 4/205 (1%)
Frame = -3
Query: 768 PPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDEL--TLEGIKQFFVAVEREEWKFD 595
P Q +L SAT + ++ + +P I V ++ T + QF++ V E K D
Sbjct: 214 PVHRQTMLFSATQTKSVKDLARLSLQNPDFISVHENDTSSTPSNLNQFYLTVPLTE-KLD 272
Query: 594 TLCDLYDTLTITQAVIFCNTKRKVDWL--TQKMQEANFTVSSMHGDMPQKERDNIMKEFR 421
L T + ++F ++ ++V ++ T + ++ +HG Q R + +F
Sbjct: 273 ILFGFIRTHLKFKTIVFLSSCKQVRFVYETFRRMRPGISLLHLHGKQKQTTRTEVTAKFT 332
Query: 420 SGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSD 241
S + VL TD+ ARG+D V VI D P + + YIHR+GR+ R+ R G A+ +
Sbjct: 333 SSRHVVLFCTDIVARGLDFPAVDWVIQLDAPEDVDTYIHRVGRTARYNRSGNALLLLLPS 392
Query: 240 DIRILRDIEQYYSTQIDEMPMNVAD 166
+ L+ +E S +I +NV D
Sbjct: 393 EEAFLKRLE---SKKIAVERINVKD 414
>SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 578
Score = 80.2 bits (189), Expect = 3e-16
Identities = 49/183 (26%), Positives = 95/183 (51%), Gaps = 5/183 (2%)
Frame = -3
Query: 756 QVVLISATLPHEILEMTS-KFMTDPIRILVK--RDELTLEGIKQFFVAVEREEWKFDTLC 586
Q +L SAT ++ ++ P+ + V + T+EG++Q +V V+ ++ +F L
Sbjct: 270 QTLLFSATQTTKVEDLARISLKPGPLYVNVDSGKPTSTVEGLEQGYVVVDSDK-RFLLLF 328
Query: 585 DLYDTLTITQAVIFCNTKRKVDWLTQKMQEANFTVSSMHGDMPQKERDNIMKEFRSGQSR 406
+ ++F ++ V ++ + + + V +HG Q+ R N EF + +
Sbjct: 329 SFLKRNLKKKVIVFMSSCASVKYMAELLNYIDLPVLDLHGKQKQQRRTNTFFEFCNAEKG 388
Query: 405 VLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGV--AINFVKSDDIR 232
+L+ T+V ARG+D+ V ++ YD P++ YIHR+GR+ R G KG ++ F+ ++
Sbjct: 389 ILLCTNVAARGLDIPAVDWIVQYDPPDDPRDYIHRVGRTAR-GTKGTGKSLMFLAPSELG 447
Query: 231 ILR 223
LR
Sbjct: 448 FLR 450
>SPBC21H7.04 |||ATP-dependent RNA helicase Dbp7 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 709
Score = 73.7 bits (173), Expect = 3e-14
Identities = 39/111 (35%), Positives = 61/111 (54%), Gaps = 3/111 (2%)
Frame = -3
Query: 483 VSSMHGDMPQKERDNIMKEFRSGQ---SRVLITTDVWARGIDVQQVSLVINYDLPNNREL 313
V +HG + Q+ R + + F S + S +L+ TDV ARG+D+ V LV+ YD P + +
Sbjct: 470 VYRLHGSLSQQIRTSTLNLFSSSEDSGSHILLCTDVAARGLDLPNVDLVVQYDAPFSTDD 529
Query: 312 YIHRIGRSGRFGRKGVAINFVKSDDIRILRDIEQYYSTQIDEMPMNVADLI 160
Y+HRIGR+ R G G AI F+ + + ++ S I E P + L+
Sbjct: 530 YLHRIGRTARAGHNGAAIMFLLPKESEYINLLKSSVSANILEQPNGPSGLL 580
>SPBC24C6.02 |||ATP-dependent RNA helicase Spb4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 606
Score = 72.9 bits (171), Expect = 5e-14
Identities = 45/154 (29%), Positives = 79/154 (51%), Gaps = 6/154 (3%)
Frame = -3
Query: 606 WKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTQKM--QEANFTVSSMHGDMPQKERDNIM 433
+K + L T+ +A++F ++ V++ + F + ++HG Q R
Sbjct: 242 YKVQCMIHLLCTIEYEKAIVFFSSCASVEYFNSLFLTYKLPFEIVALHGQQVQSNRSRNF 301
Query: 432 KEFR-SGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAI- 259
++F+ S + VL TTD+ +RG+D+ V V+ D P + + + HR GR+GR GR GVAI
Sbjct: 302 EKFKKSNKKTVLFTTDIASRGLDIPNVDFVLQLDPPLDPKSFSHRCGRAGRAGRAGVAIV 361
Query: 258 --NFVKSDDIRILRDIEQYYSTQIDEMPMNVADL 163
N + ++ L + + T+ID P+ DL
Sbjct: 362 LLNDGREEEYEELLRVRKVPITRID-TPIEALDL 394
>SPBC4F6.07c |||ATP-dependent RNA helicase Mak5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 648
Score = 72.9 bits (171), Expect = 5e-14
Identities = 33/100 (33%), Positives = 58/100 (58%)
Frame = -3
Query: 558 QAVIFCNTKRKVDWLTQKMQEANFTVSSMHGDMPQKERDNIMKEFRSGQSRVLITTDVWA 379
+ ++F N + +T + E +H + QK+R +++F++ VL+ TDV A
Sbjct: 391 KTMVFANGIEDIKRITPFLNELKVPSYPLHAQLDQKKRLQSLEKFKNNPKGVLVCTDVAA 450
Query: 378 RGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAI 259
RGID+ V+ VI+Y +P+ ++Y+HR GR+ R GV+I
Sbjct: 451 RGIDIPSVTHVIHYHVPHTADMYVHRSGRTARANEDGVSI 490
>SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces
pombe|chr 1||Partial|Manual
Length = 1887
Score = 72.1 bits (169), Expect = 8e-14
Identities = 54/180 (30%), Positives = 91/180 (50%), Gaps = 10/180 (5%)
Frame = -3
Query: 747 LISATLPHEILEMTSKFMTDPIRILVKRDELTL-EGIKQFFVAVEREEWKFDTLCDLYDT 571
L+SAT P + LEM ++ T V R+ T E I F + E+ D + T
Sbjct: 1352 LLSATFPRQ-LEMVAR-QTFCTNFYVLRETSTARENIFYFLHPYDNTEFLLDLRTLMKRT 1409
Query: 570 LTIT---QAVIFCNTKRKVDWLTQKMQE----ANFTVSSMHGDMPQKERDNIMKEFR--S 418
+A+IFC TK+ V+++ +++ + A+ V+ GD+ +ER FR +
Sbjct: 1410 KVFEGDGRAIIFCRTKKDVEYIHRRLHQSDLFAHTHVTIYTGDVSDEERQMNFDAFRNAN 1469
Query: 417 GQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDD 238
G++R++I T + GI+ V LV++Y LP + Y+ GR+GR G+ +A F + D
Sbjct: 1470 GKTRIMIATKAFGLGINYMGVRLVVHYGLPASSMDYVQETGRAGRDGKYAIAALFYEKYD 1529
>SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1919
Score = 72.1 bits (169), Expect = 8e-14
Identities = 54/180 (30%), Positives = 91/180 (50%), Gaps = 10/180 (5%)
Frame = -3
Query: 747 LISATLPHEILEMTSKFMTDPIRILVKRDELTL-EGIKQFFVAVEREEWKFDTLCDLYDT 571
L+SAT P + LEM ++ T V R+ T E I F + E+ D + T
Sbjct: 1352 LLSATFPRQ-LEMVAR-QTFCTNFYVLRETSTARENIFYFLHPYDNTEFLLDLRTLMKRT 1409
Query: 570 LTIT---QAVIFCNTKRKVDWLTQKMQE----ANFTVSSMHGDMPQKERDNIMKEFR--S 418
+A+IFC TK+ V+++ +++ + A+ V+ GD+ +ER FR +
Sbjct: 1410 KVFEGDGRAIIFCRTKKDVEYIHRRLHQSDLFAHTHVTIYTGDVSDEERQMNFDAFRNAN 1469
Query: 417 GQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDD 238
G++R++I T + GI+ V LV++Y LP + Y+ GR+GR G+ +A F + D
Sbjct: 1470 GKTRIMIATKAFGLGINYMGVRLVVHYGLPASSMDYVQETGRAGRDGKYAIAALFYEKYD 1529
>SPBC691.04 |||mitochondrial ATP-dependent RNA helicase Mss116
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 70.9 bits (166), Expect = 2e-13
Identities = 53/190 (27%), Positives = 92/190 (48%), Gaps = 8/190 (4%)
Frame = -3
Query: 759 TQVVLISATLPHEILEMTSKFM-TD--PIRILVKRDELTLEGIKQFFVAVEREEWKFDTL 589
T+ + SAT+P ++ + + TD I L + T E + QF + + ++ F +
Sbjct: 221 TRKLCFSATMPPKVSNVFRGILGTDFKLINCLDPNEPPTHERVPQFVIETKLDK-VFSSS 279
Query: 588 CDLYDTLTIT----QAVIFCNTKRKVDWLTQKMQE-ANFTVSSMHGDMPQKERDNIMKEF 424
L LT + + ++F T VD++ ++ +H + +R +I + F
Sbjct: 280 LSLLQQLTSSNPSSRIIVFLPTISMVDFVGGVLENHLKIPCFILHSGLTTAQRRSITESF 339
Query: 423 RSGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKS 244
R QS +L TDV ARG+D ++ V+ P+N + YIHRIGR+GR G+ G A +
Sbjct: 340 RKCQSGILFATDVVARGMDFPNITQVVQITGPSNTDDYIHRIGRTGRAGKTGEAYLILLE 399
Query: 243 DDIRILRDIE 214
+ L I+
Sbjct: 400 QEKPFLNSIK 409
>SPCC285.03 |||ATP-dependent RNA helicase Dbp6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 604
Score = 68.9 bits (161), Expect = 7e-13
Identities = 33/85 (38%), Positives = 49/85 (57%)
Frame = -3
Query: 492 NFTVSSMHGDMPQKERDNIMKEFRSGQSRVLITTDVWARGIDVQQVSLVINYDLPNNREL 313
+F+ + + ER I+ F +G +L+ +D+ ARGIDV VINYD P +
Sbjct: 461 SFSCGLFTSSLSRDERKKIISRFATGDLNLLVCSDLMARGIDVANTQNVINYDPPLSVRS 520
Query: 312 YIHRIGRSGRFGRKGVAINFVKSDD 238
Y+HRIGR+ R GR+G A V+S +
Sbjct: 521 YVHRIGRTARAGREGFAWTLVQSHE 545
>SPCC1494.06c |||ATP-dependent RNA helicase Dbp9
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 595
Score = 58.4 bits (135), Expect = 1e-09
Identities = 23/44 (52%), Positives = 35/44 (79%)
Frame = -3
Query: 381 ARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFV 250
ARG+D + V+ V+N+D+P+N + YIHRIGR+ R G+ G A++FV
Sbjct: 387 ARGLDFENVACVLNFDMPSNTKSYIHRIGRTARAGKPGTAMSFV 430
>SPAC2G11.12 |rqh1|hus2, rad12, rec9|RecQ type DNA helicase
Rqh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1328
Score = 55.2 bits (127), Expect = 1e-08
Identities = 27/106 (25%), Positives = 51/106 (48%), Gaps = 1/106 (0%)
Frame = -3
Query: 552 VIFCNTKRKVDWLTQKMQ-EANFTVSSMHGDMPQKERDNIMKEFRSGQSRVLITTDVWAR 376
+I+C ++ + + K++ + H + + ER I E++SG ++++ T +
Sbjct: 746 IIYCLSRTSCEQVAAKLRNDYGLKAWHYHAGLEKVERQRIQNEWQSGSYKIIVATIAFGM 805
Query: 375 GIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDD 238
G+D V VI++ P + E Y GR+GR G+ I F D
Sbjct: 806 GVDKGDVRFVIHHSFPKSLEGYYQETGRAGRDGKPAHCIMFYSYKD 851
>SPAC9.05 |mfh1||ATP-dependent DNA helicase Mfh1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 834
Score = 48.0 bits (109), Expect = 1e-06
Identities = 23/65 (35%), Positives = 39/65 (60%)
Frame = -3
Query: 462 MPQKERDNIMKEFRSGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGR 283
M QK ++ +K+F+ G+ LI T + G+D+ +V ++I YD + + R+GR+GR
Sbjct: 476 MSQKLQNETVKQFQKGEVNTLIATSIGEEGLDIGEVDMIICYDASASPIRMLQRMGRTGR 535
Query: 282 FGRKG 268
RKG
Sbjct: 536 -KRKG 539
>SPAC20H4.04 |mfh2||ATP-dependent 3' to 5' DNA helicase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 43.6 bits (98), Expect = 3e-05
Identities = 23/72 (31%), Positives = 38/72 (52%)
Frame = -3
Query: 498 EANFTVSSMHGDMPQKERDNIMKEFRSGQSRVLITTDVWARGIDVQQVSLVINYDLPNNR 319
+AN S+ M QKE + +FR+G L+ T + G+D+ ++I YD ++
Sbjct: 506 QANSAYSTGMNQMQQKET---IDQFRAGVINTLVATSIGEEGLDIGDTDMIICYDASSSP 562
Query: 318 ELYIHRIGRSGR 283
I R+GR+GR
Sbjct: 563 IRTIQRMGRTGR 574
>SPCC188.13c |dcr1|SPCC584.10c|dicer|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1374
Score = 37.5 bits (83), Expect = 0.002
Identities = 20/62 (32%), Positives = 34/62 (54%)
Frame = -3
Query: 456 QKERDNIMKEFRSGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFG 277
++++D + K F++G+ VLI T V GIDV +LVI +++ Y+ GR+
Sbjct: 410 RRQKDTLHK-FKTGKYNVLIATAVAEEGIDVPSCNLVIRFNICRTVTQYVQSRGRARAMA 468
Query: 276 RK 271
K
Sbjct: 469 SK 470
>SPAC23A1.19c ||SPAC26H5.01c|RecQ type DNA helicase Hrq1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1063
Score = 35.1 bits (77), Expect = 0.011
Identities = 20/80 (25%), Positives = 36/80 (45%)
Frame = -3
Query: 483 VSSMHGDMPQKERDNIMKEFRSGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIH 304
+ S +ER I E +G+ +I T+ GID+ + VI P +
Sbjct: 587 IQSYRAGYTVQERRKIESEMFNGKLYGIIATNALELGIDIGSLDAVITIGFPYSLSNLRQ 646
Query: 303 RIGRSGRFGRKGVAINFVKS 244
+ GR+GR + +A+ V++
Sbjct: 647 QFGRAGRRNKSSLAVYIVET 666
>SPBC11C11.11c ||SPBC3B8.12|ATP-dependent DNA helicase Irc3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 606
Score = 30.7 bits (66), Expect = 0.24
Identities = 17/93 (18%), Positives = 39/93 (41%)
Frame = -3
Query: 561 TQAVIFCNTKRKVDWLTQKMQEANFTVSSMHGDMPQKERDNIMKEFRSGQSRVLITTDVW 382
+ ++FC + ++ ++ G+ ER+ ++++FR + VL+ V
Sbjct: 266 SSTLVFCINVEHSLKVCNAFRKLGIDARALFGETNDSERETLIQDFRKKKFPVLVNCMVL 325
Query: 381 ARGIDVQQVSLVINYDLPNNRELYIHRIGRSGR 283
G D+ + ++ ++ L IGR R
Sbjct: 326 TEGTDIPNIDCLMIARPTSSPNLLTQMIGRGLR 358
>SPCC23B6.03c |tel1||ATM checkpoint kinase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 2812
Score = 28.7 bits (61), Expect = 0.97
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = -3
Query: 747 LISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTL 568
LIS TL + + F+ D + L K D+ +EG ++++ E+ + C LY TL
Sbjct: 1024 LISLTLKDSDVCVIYNFVDDLVIFLKKCDKTLIEGFVLPILSIKIEKSLYKGFCYLYLTL 1083
Query: 567 TI 562
+
Sbjct: 1084 KV 1085
>SPAC25A8.01c ||snf2SR|fun thirty related protein
Fft3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 922
Score = 28.7 bits (61), Expect = 0.97
Identities = 27/112 (24%), Positives = 48/112 (42%), Gaps = 4/112 (3%)
Frame = -3
Query: 558 QAVIFCNTKRKVDWLTQKMQEANFTVSSMHGDMPQKERDNIMKEFRSGQSR--VLITTDV 385
+ V+F + +D L M+ N G R +++ +F + +S L++T
Sbjct: 779 RVVLFSQFTQVLDILQLVMKSLNLKFLRFDGSTQVDFRQDLIDQFYADESINVFLLSTKA 838
Query: 384 WARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKG--VAINFVKSDDI 235
GI++ ++VI YD+ N + R+ R G+K FV D I
Sbjct: 839 GGFGINLACANMVILYDVSFNPFDDLQAEDRAHRVGQKKEVTVYKFVVKDTI 890
>SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 503
Score = 28.3 bits (60), Expect = 1.3
Identities = 18/65 (27%), Positives = 33/65 (50%)
Frame = +1
Query: 262 GDTLTTESTRSTNSVNVQLTIVGQVIVYNQGYLLDINASCPDVSCNENTALTRTEFLHNV 441
G T+ T+ R + + + + GQ+I +N +L+ P V+C NT + +T L +
Sbjct: 143 GQTIETDIKRFAYTRHEPIGVCGQIIPWNFPFLMCAWKIAPAVACG-NTIILKTAELTPL 201
Query: 442 VSLFL 456
+L L
Sbjct: 202 SALCL 206
>SPAC3H1.10 |||phytochelatin synthetase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 414
Score = 27.1 bits (57), Expect = 3.0
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +1
Query: 538 ITKYYCLGNCQCIIEVTKCVK 600
+ ++ CL NC + +TKCVK
Sbjct: 139 LEEFSCLANCNGLRTITKCVK 159
>SPAC20H4.01 ||SPAC631.03|U3 snoRNP-associated protein
Utp5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 666
Score = 26.6 bits (56), Expect = 3.9
Identities = 20/84 (23%), Positives = 35/84 (41%), Gaps = 4/84 (4%)
Frame = +1
Query: 190 IYLSRVVLFNVSQDPDVI*FNEVDGDTLTTE----STRSTNSVNVQLTIVGQVIVYNQGY 357
+Y S + ++S +++ G+ L S T S + I+G ++ N G+
Sbjct: 75 LYASEQITTDISGSGEILVLGTNSGEILIYSEHLGSLTRTYSFGILQKIIGAHVLANDGF 134
Query: 358 LLDINASCPDVSCNENTALTRTEF 429
+DI V + NT RT F
Sbjct: 135 AIDITGKV--VCFSVNTGEVRTSF 156
>SPAC17A5.16 |||human down-regulated in multiple cancers-1 homolog
3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 925
Score = 26.6 bits (56), Expect = 3.9
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = -3
Query: 213 QYYSTQIDEMPMNVADLI*LCLYCVHYLCVEWIFC 109
Q+Y+ + E + + L+ +CL+ VHYL E + C
Sbjct: 463 QFYALRYREDNEH-SGLVRICLFIVHYLSCEKVLC 496
>SPAC1786.01c ||SPAC31G5.20c|triacylglycerol
lipase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 630
Score = 26.2 bits (55), Expect = 5.2
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = -3
Query: 612 EEWKFDTLCDLYDTLTITQAVIFCNTKRK--VDW 517
+EWK D + D YD T+ QAV K + DW
Sbjct: 143 DEWKLDPVYDYYD-YTLVQAVYSSLVKHREQKDW 175
>SPBC19G7.05c |bgs1|cps1, drc1|1,3-beta-glucan synthase catalytic
subunit Bgs1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1729
Score = 26.2 bits (55), Expect = 5.2
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = -3
Query: 600 FDTLCDLYDTLTITQAVIFCNTKRKVDWLTQKMQEANFTVSSMHG 466
F +C +Y ++T + ++ TKR L + ANFT +S G
Sbjct: 457 FSLVCVVYYSITPLRNLVGFTTKRSGKNLANRFFTANFTPTSKTG 501
>SPAC821.05 |||translation initiation factor
eIF3h|Schizosaccharomyces pombe|chr 1|||Manual
Length = 357
Score = 26.2 bits (55), Expect = 5.2
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = +1
Query: 463 VTVH*ADSEICLLHLLCEPVNLPLCITKYYCLGNCQCIIEVTK 591
+ +H + CLLH L EP +T L +C+ + +T+
Sbjct: 192 IVIHNSHLATCLLHSLSEPPTPASTLTAEAALEDCESNLPLTE 234
>SPAC15E1.04 |||thymidylate synthase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 625
Score = 25.4 bits (53), Expect = 9.1
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = -3
Query: 696 MTDPIRILVKRDELTLEGIKQFFVAVEREEW 604
+TDP R V++++LT G+ + A + + W
Sbjct: 65 LTDPARNFVEKEDLTALGVNVYNNADDWKNW 95
>SPBC11B10.05c |rsp1||random septum position protein
Rsp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 494
Score = 25.4 bits (53), Expect = 9.1
Identities = 17/70 (24%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
Frame = -3
Query: 603 KFDTLCDLYDTLTITQAVIFCNTKRKVDWLTQKMQEANFTVSSMHGDMP---QKERDNIM 433
K D + +++T A F K+K D ++ N T S+H + E++N
Sbjct: 99 KNDISTKVASKVSVTMATKFAEKKKKQDRENVDSKDNNITNFSLHRSFSASGKMEKNNSF 158
Query: 432 KEFRSGQSRV 403
KE + +S +
Sbjct: 159 KEVSTSKSYI 168
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,254,987
Number of Sequences: 5004
Number of extensions: 69227
Number of successful extensions: 202
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 186
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 195
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 371330890
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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