Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_pT_G12
(770 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 118 5e-29
AM420631-1|CAM06631.1| 153|Apis mellifera bursicon subunit alph... 25 1.0
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 24 1.4
DQ435324-1|ABD92639.1| 152|Apis mellifera OBP3 protein. 23 2.4
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 23 2.4
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 23 2.4
S76958-1|AAB33933.1| 90|Apis mellifera olfactory receptor prot... 23 3.1
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 23 4.2
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 23 4.2
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 22 7.3
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 21 9.6
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 21 9.6
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 118 bits (285), Expect = 5e-29
Identities = 62/182 (34%), Positives = 106/182 (58%), Gaps = 4/182 (2%)
Frame = -3
Query: 756 QVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLY 577
Q ++ SAT P E+ + +F+ + + + V ++Q F V R + K D L ++
Sbjct: 384 QTLMFSATFPDEVQHLARRFLNNYLFLAVGIVGGACSDVEQNFYEVARNKKK-DLLKEIL 442
Query: 576 ----DTLTITQAVIFCNTKRKVDWLTQKMQEANFTVSSMHGDMPQKERDNIMKEFRSGQS 409
D+ T+ ++F K+K D++ + E N+ +S+HGD Q++R+ + +F+SG+
Sbjct: 443 ERENDSGTLGGTLVFVEMKKKADFIAVFLSENNYPTTSIHGDRLQRQREEALADFKSGRM 502
Query: 408 RVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIRI 229
+L+ T V ARG+D++ VS VINYDLP + Y+HRIGR+GR G +G A +F ++
Sbjct: 503 SILVATAVAARGLDIKNVSHVINYDLPKGIDEYVHRIGRTGRVGNRGRATSFFDPEEDAP 562
Query: 228 LR 223
LR
Sbjct: 563 LR 564
>AM420631-1|CAM06631.1| 153|Apis mellifera bursicon subunit alpha
protein precursor protein.
Length = 153
Score = 24.6 bits (51), Expect = 1.0
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = +1
Query: 496 LLHLLCEPVNLPLCITKYYCLGNCQCIIEVT 588
++H L P +P I Y C G C ++V+
Sbjct: 34 VIHFLQYPGCVPKPIPSYACRGRCSSYLQVS 64
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 24.2 bits (50), Expect = 1.4
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +3
Query: 72 FTVCLTRLIPWVDRRSIP 125
F +C L+ W D+RS P
Sbjct: 194 FVICFPPLVGWKDKRSHP 211
>DQ435324-1|ABD92639.1| 152|Apis mellifera OBP3 protein.
Length = 152
Score = 23.4 bits (48), Expect = 2.4
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +1
Query: 379 CPDVSCNENTALTRTEFLHNVVSLFLWHVT 468
C D + NE+ LT +F V+ +H+T
Sbjct: 101 CVDNAKNEDKCLTAQKFSRCVIDYVKFHIT 130
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 23.4 bits (48), Expect = 2.4
Identities = 8/22 (36%), Positives = 15/22 (68%)
Frame = +1
Query: 232 PDVI*FNEVDGDTLTTESTRST 297
PD++ +N DG+ T +T++T
Sbjct: 113 PDIVLYNNADGNFEVTLATKAT 134
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 23.4 bits (48), Expect = 2.4
Identities = 8/22 (36%), Positives = 15/22 (68%)
Frame = +1
Query: 232 PDVI*FNEVDGDTLTTESTRST 297
PD++ +N DG+ T +T++T
Sbjct: 109 PDIVLYNNADGNFEVTLATKAT 130
>S76958-1|AAB33933.1| 90|Apis mellifera olfactory receptor
protein.
Length = 90
Score = 23.0 bits (47), Expect = 3.1
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +1
Query: 559 GNCQCIIEVTKCVKLPFFSFNCHKELFDTLQ 651
G C II++ ++LPF N F LQ
Sbjct: 12 GFCHSIIQIPVIIQLPFCGPNVIDHYFRDLQ 42
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 22.6 bits (46), Expect = 4.2
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +1
Query: 232 PDVI*FNEVDGDTLTTESTRST 297
PD++ +N DG+ T T++T
Sbjct: 113 PDIVLYNNADGNYEVTLMTKAT 134
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 22.6 bits (46), Expect = 4.2
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +1
Query: 232 PDVI*FNEVDGDTLTTESTRST 297
PD++ +N DG+ T T++T
Sbjct: 118 PDIVLYNNADGNYEVTLMTKAT 139
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 21.8 bits (44), Expect = 7.3
Identities = 12/21 (57%), Positives = 13/21 (61%), Gaps = 3/21 (14%)
Frame = +3
Query: 411 FDQNGIPS*CCL---SLSVAC 464
FDQ GIP CL S SV+C
Sbjct: 139 FDQTGIPPTTCLVFSSGSVSC 159
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 21.4 bits (43), Expect = 9.6
Identities = 7/23 (30%), Positives = 13/23 (56%)
Frame = +1
Query: 499 LHLLCEPVNLPLCITKYYCLGNC 567
+H +C + L I+ +C+G C
Sbjct: 1 MHNICSRLGRILLISAVFCVGLC 23
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 21.4 bits (43), Expect = 9.6
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +1
Query: 232 PDVI*FNEVDGDTLTTESTRS 294
PD++ +N DG+ T T++
Sbjct: 105 PDIVLYNNADGEYGVTTMTKA 125
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 218,413
Number of Sequences: 438
Number of extensions: 4901
Number of successful extensions: 15
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24154023
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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