Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_G06
         (537 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC047079-1|AAH47079.1|  104|Homo sapiens Lyrm7 homolog (mouse) p...    80   6e-15
BC037930-1|AAH37930.1|  104|Homo sapiens Lyrm7 homolog (mouse) p...    79   7e-15
BC104668-1|AAI04669.1|   88|Homo sapiens LYR motif containing 2 ...    33   0.85 
BC009782-1|AAH09782.1|   88|Homo sapiens LYR motif containing 2 ...    33   0.85 
Z15005-1|CAA78727.1| 2663|Homo sapiens CENP-E protein.                 32   1.1  
AK128446-1|BAC87444.1|  121|Homo sapiens protein ( Homo sapiens ...    30   4.5  

>BC047079-1|AAH47079.1|  104|Homo sapiens Lyrm7 homolog (mouse)
           protein.
          Length = 104

 Score = 79.8 bits (188), Expect = 6e-15
 Identities = 43/93 (46%), Positives = 57/93 (61%)
 Frame = -1

Query: 378 VLQSFKKLHRTRMKVFEGDERALLAARIKINEEFRKNKNVQNENSIKAMIAFGEDIEREL 199
           VLQ FK LHRTR +VF+ D RAL AARIKINEEF+ NK+  +   I+ ++  G DIE  L
Sbjct: 7   VLQLFKTLHRTRQQVFKNDARALEAARIKINEEFKNNKSETSSKKIEELMKIGSDIELLL 66

Query: 198 RTQVIQAREIKPGVYEARITDDTVKLDNIPFND 100
           RT VIQ         +     D + ++N+P+ D
Sbjct: 67  RTSVIQGIHTDHNTLKLVPRKDLL-VENVPYCD 98


>BC037930-1|AAH37930.1|  104|Homo sapiens Lyrm7 homolog (mouse)
           protein.
          Length = 104

 Score = 79.4 bits (187), Expect = 7e-15
 Identities = 42/93 (45%), Positives = 57/93 (61%)
 Frame = -1

Query: 378 VLQSFKKLHRTRMKVFEGDERALLAARIKINEEFRKNKNVQNENSIKAMIAFGEDIEREL 199
           VLQ FK LHRTR +VF+ D RAL AARIKINEEF+ NK+  +   I+ ++  G D+E  L
Sbjct: 7   VLQLFKTLHRTRQQVFKNDARALEAARIKINEEFKNNKSETSSKKIEELMKIGSDVELLL 66

Query: 198 RTQVIQAREIKPGVYEARITDDTVKLDNIPFND 100
           RT VIQ         +     D + ++N+P+ D
Sbjct: 67  RTSVIQGIHTDHNTLKLVPRKDLL-VENVPYCD 98


>BC104668-1|AAI04669.1|   88|Homo sapiens LYR motif containing 2
           protein.
          Length = 88

 Score = 32.7 bits (71), Expect = 0.85
 Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
 Frame = -1

Query: 402 LKMMTRRL-VLQSFKKLHRTRMKVFEGDERALLAARIKINEEFRKNKNVQNENSIKAMIA 226
           LK   RR  VL  ++++ +T  +V    +R  L    +  EEFR+NK+   E++I+ MI 
Sbjct: 13  LKQFVRRQQVLLLYRRILQTIRQVPNDSDRKYLKDWAR--EEFRRNKSATEEDTIRMMIT 70

Query: 225 FGEDIERELRTQVIQAR 175
            G    +EL   +  A+
Sbjct: 71  QGNMQLKELEKTLALAK 87


>BC009782-1|AAH09782.1|   88|Homo sapiens LYR motif containing 2
           protein.
          Length = 88

 Score = 32.7 bits (71), Expect = 0.85
 Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
 Frame = -1

Query: 402 LKMMTRRL-VLQSFKKLHRTRMKVFEGDERALLAARIKINEEFRKNKNVQNENSIKAMIA 226
           LK   RR  VL  ++++ +T  +V    +R  L    +  EEFR+NK+   E++I+ MI 
Sbjct: 13  LKQFVRRQQVLLLYRRILQTIRQVPNDSDRKYLKDWAR--EEFRRNKSATEEDTIRMMIT 70

Query: 225 FGEDIERELRTQVIQAR 175
            G    +EL   +  A+
Sbjct: 71  QGNMQLKELEKTLALAK 87


>Z15005-1|CAA78727.1| 2663|Homo sapiens CENP-E protein.
          Length = 2663

 Score = 32.3 bits (70), Expect = 1.1
 Identities = 20/72 (27%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
 Frame = -1

Query: 324 DERALLAARIKINEEFRKNKNVQN-ENSIKAMIAFGEDIERELRTQVIQAREIKPGVYEA 148
           DE   L  + K ++E +    + N +N +K    + +D+E EL ++V   RE +  + + 
Sbjct: 535 DEFEALERKTKKDQEMQLIHEISNLKNLVKHREVYNQDLENELSSKVELLREKEDQIKKL 594

Query: 147 RITDDTVKLDNI 112
           +   D+ KL+NI
Sbjct: 595 QEYIDSQKLENI 606


>AK128446-1|BAC87444.1|  121|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46589 fis, clone THYMU3044188. ).
          Length = 121

 Score = 30.3 bits (65), Expect = 4.5
 Identities = 19/58 (32%), Positives = 29/58 (50%)
 Frame = +1

Query: 190 LSP*FPFYILSKCNHRFNRVFILNIFVFAKFFIYFYSCR**STFVAFEDFHSSSVQFL 363
           + P F  + L   +  F+ +F L+   F+ FF +FY     S+F  F  F S S+ FL
Sbjct: 1   MGPQFLSFFLFLPSFLFSFLFFLSFLFFSSFFSFFYFL---SSFPLFSFFLSFSLSFL 55


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,622,188
Number of Sequences: 237096
Number of extensions: 1024759
Number of successful extensions: 1573
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1552
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1573
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5273648886
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)