Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_pT_G01
(741 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 46 4e-07
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 40 3e-05
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 40 3e-05
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 32 0.005
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 23 4.0
AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 23 4.0
AF205594-1|AAQ13840.1| 156|Apis mellifera acid phosphatase prec... 22 7.0
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 46.0 bits (104), Expect = 4e-07
Identities = 22/66 (33%), Positives = 33/66 (50%)
Frame = -1
Query: 522 DLLLPCRVFSYAXTQVYWXYGDXXLVYETFGRIRVLPSGDLYISGLKWSDMGNYTCVAKN 343
D+ LPC +V W V ++ R+R LP G L+I + +D G Y+C +N
Sbjct: 1293 DVKLPCLAVGVPAPEVTWKV--RGAVLQSSDRLRQLPEGSLFIKEVDRTDAGEYSCYVEN 1350
Query: 342 IYGKDT 325
+G DT
Sbjct: 1351 TFGHDT 1356
Score = 36.3 bits (80), Expect = 3e-04
Identities = 22/72 (30%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
Frame = -1
Query: 528 GTDLLLPCRVFSYAXTQVYWXYGDXXLVYETFGRIRVLPSGDLYISGL-KWSDMGNYTCV 352
G L + C V Y + W L + +V P+G L I + + SD YTCV
Sbjct: 505 GETLRVTCPVAGYPIESIVWERDTRVLPINR--KQKVFPNGTLIIENVERMSDQATYTCV 562
Query: 351 AKNIYGKDTGST 316
A+N G T
Sbjct: 563 ARNAQGYSARGT 574
Score = 27.5 bits (58), Expect = 0.14
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -1
Query: 405 DLYISGLKWSDMGNYTCVAKNIYGKDTGS 319
DL I + SD +TCVA N +G D S
Sbjct: 839 DLSIKRTERSDSALFTCVATNAFGSDDTS 867
Score = 27.1 bits (57), Expect = 0.18
Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 6/75 (8%)
Frame = -1
Query: 540 FQNIGTDLLLPCRVFSYAXTQVYWXYGDXXLVYETFGRIRVLPSGDLYISGLKWSDMGN- 364
F N GT ++ C+ + W D V + G +VLP+G+L + D
Sbjct: 15 FSN-GTGAVVECQARGNPQPDIIWVRADGSAVGDVPGLRQVLPNGNLVFPPFRAEDYRQE 73
Query: 363 -----YTCVAKNIYG 334
Y+C+A++ G
Sbjct: 74 VHAQVYSCLARSPAG 88
Score = 26.6 bits (56), Expect = 0.24
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = -1
Query: 429 RIRVLPSGDLYISGLKWSDMGNYTCVAKNIYGKDTGSTFIYPVKP 295
R+R + SG L I + D G Y C+ N G ++ T + P
Sbjct: 264 RVRQV-SGTLIIREARVEDSGKYLCIVNNSVGGESVETVLTVTAP 307
Score = 22.2 bits (45), Expect = 5.3
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = -1
Query: 432 GRIRVLPSGDLYISGLKWSD-MGNYTCVAKN 343
G+ VLPSG+L+I + D Y C K+
Sbjct: 155 GKYLVLPSGELHIRDVGPEDGYKTYQCRTKH 185
Score = 21.8 bits (44), Expect = 7.0
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = -1
Query: 402 LYISGLKWSDMGNYTCVAKNIYGKDTGST 316
L IS + G Y C A+N G + ST
Sbjct: 643 LMISVITARHAGEYVCTAENAAGTASHST 671
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 39.5 bits (88), Expect = 3e-05
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = -1
Query: 426 IRVLPSGDLYISGLKWSDMGNYTCVAKNIYGKD 328
I++LPSG+L +S L+ D G+YTC +N G D
Sbjct: 1361 IQILPSGELMLSNLQSQDGGDYTCQVENAQGND 1393
Score = 37.9 bits (84), Expect = 1e-04
Identities = 24/66 (36%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = -1
Query: 528 GTDLLLPCRVFSYAXTQVYWXYGDXXLVYETFGRIRVLPSGDLYISGL-KWSDMGNYTCV 352
G L L C V Y ++ W + L + R +VLP G L I+ + K D G YTC
Sbjct: 533 GETLRLKCPVAGYPIEEIKWERANRELPDDL--RQKVLPDGTLVITSVQKKGDAGVYTCS 590
Query: 351 AKNIYG 334
A+N G
Sbjct: 591 ARNKQG 596
Score = 32.7 bits (71), Expect = 0.004
Identities = 24/75 (32%), Positives = 29/75 (38%), Gaps = 8/75 (10%)
Frame = -1
Query: 528 GTDLLLPCRVFSYAXTQVYWXYGDXXLV-----YETFGRIRVLPSG---DLYISGLKWSD 373
G L C V V W G + Y + V P G L IS + SD
Sbjct: 822 GDTATLHCEVHGDTPVTVTWLKGGKIELNPSTNYRVTVKREVTPDGVIAQLQISSAEASD 881
Query: 372 MGNYTCVAKNIYGKD 328
G Y C A N+YG+D
Sbjct: 882 SGAYFCQASNLYGRD 896
Score = 25.4 bits (53), Expect = 0.56
Identities = 10/27 (37%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = -1
Query: 432 GRIRVLPSGDLYISGLKWSD-MGNYTC 355
G+ +LP+G+L + L++SD + Y C
Sbjct: 183 GKFHLLPTGELLVHSLEFSDQIHGYRC 209
Score = 24.6 bits (51), Expect = 0.99
Identities = 28/88 (31%), Positives = 36/88 (40%), Gaps = 10/88 (11%)
Frame = -1
Query: 558 LHYSAVFQNI--GTDLLLPCRVFSYAXTQVYWXYGDXXLVYETFGRIR----VLPSGDLY 397
L YS + Q + G + L C QV W L T GR V GD+
Sbjct: 424 LLYSFIEQTLQPGPAVSLKCSAAGNPTPQVTWALDGFAL--PTNGRFMIGQYVTVHGDVI 481
Query: 396 ----ISGLKWSDMGNYTCVAKNIYGKDT 325
IS + D G Y+C+A+N GK T
Sbjct: 482 SHVNISHVMVEDGGEYSCMAENRAGKVT 509
Score = 22.6 bits (46), Expect = 4.0
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -1
Query: 402 LYISGLKWSDMGNYTCVAKN 343
L I+ L G+YTCVA N
Sbjct: 674 LSITNLAAEHSGDYTCVAAN 693
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 39.5 bits (88), Expect = 3e-05
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = -1
Query: 426 IRVLPSGDLYISGLKWSDMGNYTCVAKNIYGKD 328
I++LPSG+L +S L+ D G+YTC +N G D
Sbjct: 1357 IQILPSGELMLSNLQSQDGGDYTCQVENAQGND 1389
Score = 37.9 bits (84), Expect = 1e-04
Identities = 24/66 (36%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = -1
Query: 528 GTDLLLPCRVFSYAXTQVYWXYGDXXLVYETFGRIRVLPSGDLYISGL-KWSDMGNYTCV 352
G L L C V Y ++ W + L + R +VLP G L I+ + K D G YTC
Sbjct: 533 GETLRLKCPVAGYPIEEIKWERANRELPDDL--RQKVLPDGTLVITSVQKKGDAGVYTCS 590
Query: 351 AKNIYG 334
A+N G
Sbjct: 591 ARNKQG 596
Score = 32.7 bits (71), Expect = 0.004
Identities = 24/75 (32%), Positives = 29/75 (38%), Gaps = 8/75 (10%)
Frame = -1
Query: 528 GTDLLLPCRVFSYAXTQVYWXYGDXXLV-----YETFGRIRVLPSG---DLYISGLKWSD 373
G L C V V W G + Y + V P G L IS + SD
Sbjct: 818 GDTATLHCEVHGDTPVTVTWLKGGKIELNPSTNYRVTVKREVTPDGVIAQLQISSAEASD 877
Query: 372 MGNYTCVAKNIYGKD 328
G Y C A N+YG+D
Sbjct: 878 SGAYFCQASNLYGRD 892
Score = 25.4 bits (53), Expect = 0.56
Identities = 10/27 (37%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = -1
Query: 432 GRIRVLPSGDLYISGLKWSD-MGNYTC 355
G+ +LP+G+L + L++SD + Y C
Sbjct: 183 GKFHLLPTGELLVHSLEFSDQIHGYRC 209
Score = 24.6 bits (51), Expect = 0.99
Identities = 28/88 (31%), Positives = 36/88 (40%), Gaps = 10/88 (11%)
Frame = -1
Query: 558 LHYSAVFQNI--GTDLLLPCRVFSYAXTQVYWXYGDXXLVYETFGRIR----VLPSGDLY 397
L YS + Q + G + L C QV W L T GR V GD+
Sbjct: 424 LLYSFIEQTLQPGPAVSLKCSAAGNPTPQVTWALDGFAL--PTNGRFMIGQYVTVHGDVI 481
Query: 396 ----ISGLKWSDMGNYTCVAKNIYGKDT 325
IS + D G Y+C+A+N GK T
Sbjct: 482 SHVNISHVMVEDGGEYSCMAENRAGKVT 509
Score = 23.8 bits (49), Expect = 1.7
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -1
Query: 402 LYISGLKWSDMGNYTCVAKNI 340
L I L GNY+CVA+N+
Sbjct: 670 LMIEHLSPDHNGNYSCVARNL 690
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 32.3 bits (70), Expect = 0.005
Identities = 18/71 (25%), Positives = 30/71 (42%)
Frame = -1
Query: 561 TLHYSAVFQNIGTDLLLPCRVFSYAXTQVYWXYGDXXLVYETFGRIRVLPSGDLYISGLK 382
+L + + +G ++ + C V + W L IRV G LY++ ++
Sbjct: 314 SLEVNHISARVGDNVEIKCDVTGTPPPPLVWRRNGADLETLNEPEIRVFNDGSLYLTKVQ 373
Query: 381 WSDMGNYTCVA 349
GNYTC A
Sbjct: 374 LIHAGNYTCHA 384
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 22.6 bits (46), Expect = 4.0
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = -2
Query: 434 LAG*ECCRPGTCTSAASS 381
L G E C+ G CT SS
Sbjct: 116 LVGKEACKQGVCTVEVSS 133
>AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein.
Length = 602
Score = 22.6 bits (46), Expect = 4.0
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = -2
Query: 434 LAG*ECCRPGTCTSAASS 381
L G E C+ G CT SS
Sbjct: 116 LVGKEACKQGVCTVEVSS 133
>AF205594-1|AAQ13840.1| 156|Apis mellifera acid phosphatase
precursor protein.
Length = 156
Score = 21.8 bits (44), Expect = 7.0
Identities = 9/37 (24%), Positives = 21/37 (56%)
Frame = -1
Query: 420 VLPSGDLYISGLKWSDMGNYTCVAKNIYGKDTGSTFI 310
+ P G+L+ + + ++ N T + K +YG ++ F+
Sbjct: 101 IFPKGELFDATVFTYNITNSTPLLKKLYGGNSTIIFL 137
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,422
Number of Sequences: 438
Number of extensions: 3513
Number of successful extensions: 24
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23144850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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