Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_F21
         (382 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    25   0.19 
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    25   0.19 
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   3.1  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   3.1  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   4.2  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   5.5  

>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 25.4 bits (53), Expect = 0.19
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -1

Query: 127 FNTRFNCKPIKYCCFFFSYCYIGFAKK 47
           F +RF C P     F+ SY Y  +++K
Sbjct: 75  FMSRFLCLPFYSYFFYLSYIYTTYSRK 101


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 25.4 bits (53), Expect = 0.19
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -1

Query: 127 FNTRFNCKPIKYCCFFFSYCYIGFAKK 47
           F +RF C P     F+ SY Y  +++K
Sbjct: 31  FMSRFLCLPFYSYFFYLSYIYTTYSRK 57


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 3.1
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 7    YNCLSFPXLFYETVFSQNL 63
            +NCL +  ++Y TV S  L
Sbjct: 999  FNCLKYGVIYYVTVPSMYL 1017


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 3.1
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 7    YNCLSFPXLFYETVFSQNL 63
            +NCL +  ++Y TV S  L
Sbjct: 999  FNCLKYGVIYYVTVPSMYL 1017


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 4.2
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = +2

Query: 101 RLAIKSCIKSPIDNDNNLGRSLKTCKVGLSIRTS 202
           +L + S IKS    +NN+ R +   K+ +S + S
Sbjct: 66  KLNVFSIIKSRAAGNNNIQRVVPEIKIQISQQQS 99


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 20.6 bits (41), Expect = 5.5
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 100 IKYCCFFFSYCYIGF 56
           +K   FFFS+C I F
Sbjct: 6   LKRVLFFFSFCCILF 20



 Score = 20.2 bits (40), Expect = 7.3
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +1

Query: 322 IYTXNNNHRNRL 357
           +YT  N HR+RL
Sbjct: 596 VYTRLNTHRDRL 607


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,196
Number of Sequences: 336
Number of extensions: 1123
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  7908675
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)