Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_F21
         (382 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ973474-1|CAJ01521.1|  191|Anopheles gambiae hypothetical prote...    22   6.6  
AJ697734-1|CAG26927.1|  191|Anopheles gambiae putative chemosens...    22   6.6  
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    22   6.6  

>AJ973474-1|CAJ01521.1|  191|Anopheles gambiae hypothetical protein
           protein.
          Length = 191

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +3

Query: 60  PI*QYEKKKQQYLIGLQLNLV 122
           P  +Y ++ ++YL GLQ N +
Sbjct: 114 PSGEYHRRFEEYLRGLQFNQI 134


>AJ697734-1|CAG26927.1|  191|Anopheles gambiae putative chemosensory
           protein CSP5 protein.
          Length = 191

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +3

Query: 60  PI*QYEKKKQQYLIGLQLNLV 122
           P  +Y ++ ++YL GLQ N +
Sbjct: 114 PSGEYHRRFEEYLRGLQFNQI 134


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1209

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = +3

Query: 72   YEKKKQQYLIGLQLNLVLNHRSTMTITWAV 161
            YEK+K++  I + + + L+H    T +  V
Sbjct: 1108 YEKRKKRATIDIDIAVTLDHNVQTTFSTKV 1137


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 310,054
Number of Sequences: 2352
Number of extensions: 4682
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 29074284
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)