Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_pT_F21
(382 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC100797-1|AAI00798.1| 355|Homo sapiens AMICA1 protein protein. 29 5.0
BC100796-1|AAI00797.1| 355|Homo sapiens AMICA1 protein protein. 29 5.0
BC100795-1|AAI00796.1| 305|Homo sapiens AMICA1 protein protein. 29 5.0
BC100794-1|AAI00795.1| 355|Homo sapiens AMICA1 protein protein. 29 5.0
AY358362-1|AAQ88728.1| 394|Homo sapiens AMICA protein. 29 5.0
AY138965-1|AAN52117.1| 394|Homo sapiens adhesion molecule AMICA... 29 5.0
AY093687-1|AAM15731.1| 215|Homo sapiens dendritic-cell specific... 29 5.0
AY093686-1|AAM15730.1| 394|Homo sapiens dendritic-cell specific... 29 5.0
AK094399-1|BAC04347.1| 384|Homo sapiens protein ( Homo sapiens ... 29 5.0
AK090409-1|BAC03390.1| 283|Homo sapiens FLJ00300 protein protein. 29 5.0
AJ515553-1|CAD56620.2| 394|Homo sapiens putative junctional adh... 29 5.0
>BC100797-1|AAI00798.1| 355|Homo sapiens AMICA1 protein protein.
Length = 355
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -2
Query: 204 SEVLIERPTLHVLSERPKLLSLSIGDLIQ 118
S+V + LHVL E PK L + +G LIQ
Sbjct: 85 SQVFKKAVVLHVLPEEPKELMVHVGGLIQ 113
>BC100796-1|AAI00797.1| 355|Homo sapiens AMICA1 protein protein.
Length = 355
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -2
Query: 204 SEVLIERPTLHVLSERPKLLSLSIGDLIQ 118
S+V + LHVL E PK L + +G LIQ
Sbjct: 85 SQVFKKAVVLHVLPEEPKELMVHVGGLIQ 113
>BC100795-1|AAI00796.1| 305|Homo sapiens AMICA1 protein protein.
Length = 305
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -2
Query: 204 SEVLIERPTLHVLSERPKLLSLSIGDLIQ 118
S+V + LHVL E PK L + +G LIQ
Sbjct: 85 SQVFKKAVVLHVLPEEPKELMVHVGGLIQ 113
>BC100794-1|AAI00795.1| 355|Homo sapiens AMICA1 protein protein.
Length = 355
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -2
Query: 204 SEVLIERPTLHVLSERPKLLSLSIGDLIQ 118
S+V + LHVL E PK L + +G LIQ
Sbjct: 85 SQVFKKAVVLHVLPEEPKELMVHVGGLIQ 113
>AY358362-1|AAQ88728.1| 394|Homo sapiens AMICA protein.
Length = 394
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -2
Query: 204 SEVLIERPTLHVLSERPKLLSLSIGDLIQ 118
S+V + LHVL E PK L + +G LIQ
Sbjct: 124 SQVFKKAVVLHVLPEEPKELMVHVGGLIQ 152
>AY138965-1|AAN52117.1| 394|Homo sapiens adhesion molecule AMICA
protein.
Length = 394
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -2
Query: 204 SEVLIERPTLHVLSERPKLLSLSIGDLIQ 118
S+V + LHVL E PK L + +G LIQ
Sbjct: 124 SQVFKKAVVLHVLPEEPKELMVHVGGLIQ 152
>AY093687-1|AAM15731.1| 215|Homo sapiens dendritic-cell specific
protein CREA7-4 protein.
Length = 215
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -2
Query: 204 SEVLIERPTLHVLSERPKLLSLSIGDLIQ 118
S+V + LHVL E PK L + +G LIQ
Sbjct: 80 SQVFKKAVVLHVLPEEPKELMVHVGGLIQ 108
>AY093686-1|AAM15730.1| 394|Homo sapiens dendritic-cell specific
protein CREA7-1 protein.
Length = 394
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -2
Query: 204 SEVLIERPTLHVLSERPKLLSLSIGDLIQ 118
S+V + LHVL E PK L + +G LIQ
Sbjct: 124 SQVFKKAVVLHVLPEEPKELMVHVGGLIQ 152
>AK094399-1|BAC04347.1| 384|Homo sapiens protein ( Homo sapiens
cDNA FLJ37080 fis, clone BRACE2016335, weakly similar to
MYELIN P0 PROTEIN PRECURSOR. ).
Length = 384
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -2
Query: 204 SEVLIERPTLHVLSERPKLLSLSIGDLIQ 118
S+V + LHVL E PK L + +G LIQ
Sbjct: 114 SQVFKKAVVLHVLPEEPKELMVHVGGLIQ 142
>AK090409-1|BAC03390.1| 283|Homo sapiens FLJ00300 protein protein.
Length = 283
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -2
Query: 204 SEVLIERPTLHVLSERPKLLSLSIGDLIQ 118
S+V + LHVL E PK L + +G LIQ
Sbjct: 148 SQVFKKAVVLHVLPEEPKELMVHVGGLIQ 176
>AJ515553-1|CAD56620.2| 394|Homo sapiens putative junctional
adhesion molecule protein.
Length = 394
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -2
Query: 204 SEVLIERPTLHVLSERPKLLSLSIGDLIQ 118
S+V + LHVL E PK L + +G LIQ
Sbjct: 124 SQVFKKAVVLHVLPEEPKELMVHVGGLIQ 152
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,179,932
Number of Sequences: 237096
Number of extensions: 564919
Number of successful extensions: 611
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 611
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 611
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2526356360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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