Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_pT_F19
(418 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U57847-1|AAB02266.1| 84|Homo sapiens ribosomal protein S27 pro... 101 7e-22
L19739-1|AAA59867.1| 84|Homo sapiens metallopanstimulin protein. 101 7e-22
BC070219-1|AAH70219.1| 84|Homo sapiens ribosomal protein S27 (... 101 7e-22
BC003667-1|AAH03667.1| 84|Homo sapiens ribosomal protein S27-l... 101 7e-22
BC002658-1|AAH02658.1| 84|Homo sapiens ribosomal protein S27 (... 101 7e-22
AL358472-19|CAI14033.1| 84|Homo sapiens ribosomal protein S27 ... 101 7e-22
AB061845-1|BAB79483.1| 84|Homo sapiens ribosomal protein S27 p... 101 7e-22
BC047648-1|AAH47648.1| 113|Homo sapiens RPS27L protein protein. 87 3e-17
AB007162-1|BAA25825.1| 69|Homo sapiens ribosomal protein S27 p... 79 8e-15
AL358472-18|CAI14032.1| 66|Homo sapiens ribosomal protein S27 ... 66 3e-11
AK092303-1|BAC03856.1| 316|Homo sapiens protein ( Homo sapiens ... 30 3.6
BC007355-1|AAH07355.1| 287|Homo sapiens solute carrier family 2... 29 8.2
AK075249-1|BAC11497.1| 287|Homo sapiens protein ( Homo sapiens ... 29 8.2
AJ131613-1|CAB59892.1| 287|Homo sapiens dicarboxylate carrier p... 29 8.2
AJ131612-1|CAB60007.1| 287|Homo sapiens dicarboxylate carrier p... 29 8.2
>U57847-1|AAB02266.1| 84|Homo sapiens ribosomal protein S27
protein.
Length = 84
Score = 101 bits (243), Expect = 7e-22
Identities = 42/47 (89%), Positives = 45/47 (95%)
Frame = -1
Query: 265 PGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRARLTEGCSFRRKQH 125
PGCYKITTVFSHAQ VV+C GCST+LCQPTGG+ARLTEGCSFRRKQH
Sbjct: 38 PGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRKQH 84
Score = 66.5 bits (155), Expect = 3e-11
Identities = 30/38 (78%), Positives = 31/38 (81%)
Frame = -3
Query: 377 MPLAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKXP 264
MPLA DLLHPSP E+RKHK KRLV PNSYFMDVK P
Sbjct: 1 MPLAKDLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCP 38
>L19739-1|AAA59867.1| 84|Homo sapiens metallopanstimulin protein.
Length = 84
Score = 101 bits (243), Expect = 7e-22
Identities = 42/47 (89%), Positives = 45/47 (95%)
Frame = -1
Query: 265 PGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRARLTEGCSFRRKQH 125
PGCYKITTVFSHAQ VV+C GCST+LCQPTGG+ARLTEGCSFRRKQH
Sbjct: 38 PGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRKQH 84
Score = 66.5 bits (155), Expect = 3e-11
Identities = 30/38 (78%), Positives = 31/38 (81%)
Frame = -3
Query: 377 MPLAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKXP 264
MPLA DLLHPSP E+RKHK KRLV PNSYFMDVK P
Sbjct: 1 MPLAKDLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCP 38
>BC070219-1|AAH70219.1| 84|Homo sapiens ribosomal protein S27
(metallopanstimulin 1) protein.
Length = 84
Score = 101 bits (243), Expect = 7e-22
Identities = 42/47 (89%), Positives = 45/47 (95%)
Frame = -1
Query: 265 PGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRARLTEGCSFRRKQH 125
PGCYKITTVFSHAQ VV+C GCST+LCQPTGG+ARLTEGCSFRRKQH
Sbjct: 38 PGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRKQH 84
Score = 66.5 bits (155), Expect = 3e-11
Identities = 30/38 (78%), Positives = 31/38 (81%)
Frame = -3
Query: 377 MPLAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKXP 264
MPLA DLLHPSP E+RKHK KRLV PNSYFMDVK P
Sbjct: 1 MPLAKDLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCP 38
>BC003667-1|AAH03667.1| 84|Homo sapiens ribosomal protein S27-like
protein.
Length = 84
Score = 101 bits (243), Expect = 7e-22
Identities = 42/47 (89%), Positives = 45/47 (95%)
Frame = -1
Query: 265 PGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRARLTEGCSFRRKQH 125
PGCYKITTVFSHAQ VV+C GCST+LCQPTGG+ARLTEGCSFRRKQH
Sbjct: 38 PGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRKQH 84
Score = 60.9 bits (141), Expect = 2e-09
Identities = 28/38 (73%), Positives = 30/38 (78%)
Frame = -3
Query: 377 MPLAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKXP 264
MPLA DLLHPS E++KHK KRLV PNSYFMDVK P
Sbjct: 1 MPLARDLLHPSLEEEKKKHKEKRLVQSPNSYFMDVKCP 38
>BC002658-1|AAH02658.1| 84|Homo sapiens ribosomal protein S27
(metallopanstimulin 1) protein.
Length = 84
Score = 101 bits (243), Expect = 7e-22
Identities = 42/47 (89%), Positives = 45/47 (95%)
Frame = -1
Query: 265 PGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRARLTEGCSFRRKQH 125
PGCYKITTVFSHAQ VV+C GCST+LCQPTGG+ARLTEGCSFRRKQH
Sbjct: 38 PGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRKQH 84
Score = 66.5 bits (155), Expect = 3e-11
Identities = 30/38 (78%), Positives = 31/38 (81%)
Frame = -3
Query: 377 MPLAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKXP 264
MPLA DLLHPSP E+RKHK KRLV PNSYFMDVK P
Sbjct: 1 MPLAKDLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCP 38
>AL358472-19|CAI14033.1| 84|Homo sapiens ribosomal protein S27
(metallopanstimulin 1) protein.
Length = 84
Score = 101 bits (243), Expect = 7e-22
Identities = 42/47 (89%), Positives = 45/47 (95%)
Frame = -1
Query: 265 PGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRARLTEGCSFRRKQH 125
PGCYKITTVFSHAQ VV+C GCST+LCQPTGG+ARLTEGCSFRRKQH
Sbjct: 38 PGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRKQH 84
Score = 66.5 bits (155), Expect = 3e-11
Identities = 30/38 (78%), Positives = 31/38 (81%)
Frame = -3
Query: 377 MPLAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKXP 264
MPLA DLLHPSP E+RKHK KRLV PNSYFMDVK P
Sbjct: 1 MPLAKDLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCP 38
>AB061845-1|BAB79483.1| 84|Homo sapiens ribosomal protein S27
protein.
Length = 84
Score = 101 bits (243), Expect = 7e-22
Identities = 42/47 (89%), Positives = 45/47 (95%)
Frame = -1
Query: 265 PGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRARLTEGCSFRRKQH 125
PGCYKITTVFSHAQ VV+C GCST+LCQPTGG+ARLTEGCSFRRKQH
Sbjct: 38 PGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRKQH 84
Score = 66.5 bits (155), Expect = 3e-11
Identities = 30/38 (78%), Positives = 31/38 (81%)
Frame = -3
Query: 377 MPLAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKXP 264
MPLA DLLHPSP E+RKHK KRLV PNSYFMDVK P
Sbjct: 1 MPLAKDLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCP 38
>BC047648-1|AAH47648.1| 113|Homo sapiens RPS27L protein protein.
Length = 113
Score = 86.6 bits (205), Expect = 3e-17
Identities = 36/42 (85%), Positives = 39/42 (92%)
Frame = -1
Query: 265 PGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRARLTEGCSF 140
PGCYKITTVFSHAQ VV+C GCST+LCQPTGG+ARLTEG SF
Sbjct: 54 PGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGISF 95
Score = 56.4 bits (130), Expect = 4e-08
Identities = 26/36 (72%), Positives = 28/36 (77%)
Frame = -3
Query: 371 LAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKXP 264
LA DLLHPS E++KHK KRLV PNSYFMDVK P
Sbjct: 19 LARDLLHPSLEEEKKKHKKKRLVQSPNSYFMDVKCP 54
>AB007162-1|BAA25825.1| 69|Homo sapiens ribosomal protein S27
protein.
Length = 69
Score = 78.6 bits (185), Expect = 8e-15
Identities = 32/37 (86%), Positives = 35/37 (94%)
Frame = -1
Query: 265 PGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRARLT 155
PGCYKITTVFSHAQ VV+C GCST+LCQPTGG+ARLT
Sbjct: 33 PGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLT 69
Score = 59.7 bits (138), Expect = 4e-09
Identities = 26/33 (78%), Positives = 27/33 (81%)
Frame = -3
Query: 362 DLLHPSPASERRKHKLKRLVPHPNSYFMDVKXP 264
DLLHPSP E+RKHK KRLV PNSYFMDVK P
Sbjct: 1 DLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCP 33
>AL358472-18|CAI14032.1| 66|Homo sapiens ribosomal protein S27
(metallopanstimulin 1) protein.
Length = 66
Score = 66.5 bits (155), Expect = 3e-11
Identities = 30/38 (78%), Positives = 31/38 (81%)
Frame = -3
Query: 377 MPLAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKXP 264
MPLA DLLHPSP E+RKHK KRLV PNSYFMDVK P
Sbjct: 1 MPLAKDLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCP 38
>AK092303-1|BAC03856.1| 316|Homo sapiens protein ( Homo sapiens
cDNA FLJ34984 fis, clone OCBBF2001639. ).
Length = 316
Score = 29.9 bits (64), Expect = 3.6
Identities = 21/64 (32%), Positives = 28/64 (43%)
Frame = -1
Query: 355 CILPLRRRGGNISLSG*CHILTLISWMLSXPGCYKITTVFSHAQRVVVCAGCSTILCQPT 176
CIL RR GGN+SL H+ GC + +R+ VC + C+ T
Sbjct: 18 CILVPRRAGGNVSLGEFVHVC----------GCVGVGWGADGWERIHVCEPLWILGCEST 67
Query: 175 GGRA 164
GG A
Sbjct: 68 GGGA 71
>BC007355-1|AAH07355.1| 287|Homo sapiens solute carrier family 25
(mitochondrial carrier; dicarboxylate transporter), me
protein.
Length = 287
Score = 28.7 bits (61), Expect = 8.2
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = -1
Query: 256 YKITTVFSHAQRVVVCAGCSTILCQP 179
Y +F+H + GC+T LCQP
Sbjct: 194 YLSDNIFTHFVASFIAGGCATFLCQP 219
>AK075249-1|BAC11497.1| 287|Homo sapiens protein ( Homo sapiens
cDNA FLJ90768 fis, clone THYRO1000795, highly similar to
Mitochondrial dicarboxylate carrier. ).
Length = 287
Score = 28.7 bits (61), Expect = 8.2
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = -1
Query: 256 YKITTVFSHAQRVVVCAGCSTILCQP 179
Y +F+H + GC+T LCQP
Sbjct: 194 YLSDNIFTHFVASFIAGGCATFLCQP 219
>AJ131613-1|CAB59892.1| 287|Homo sapiens dicarboxylate carrier
protein protein.
Length = 287
Score = 28.7 bits (61), Expect = 8.2
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = -1
Query: 256 YKITTVFSHAQRVVVCAGCSTILCQP 179
Y +F+H + GC+T LCQP
Sbjct: 194 YLSDNIFTHFVASFIAGGCATFLCQP 219
>AJ131612-1|CAB60007.1| 287|Homo sapiens dicarboxylate carrier
protein protein.
Length = 287
Score = 28.7 bits (61), Expect = 8.2
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = -1
Query: 256 YKITTVFSHAQRVVVCAGCSTILCQP 179
Y +F+H + GC+T LCQP
Sbjct: 194 YLSDNIFTHFVASFIAGGCATFLCQP 219
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,389,693
Number of Sequences: 237096
Number of extensions: 1196279
Number of successful extensions: 2869
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2826
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2869
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3144905170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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