Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_F19
         (418 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118959-1|AAM50819.1|   84|Drosophila melanogaster LD37859p pro...    97   8e-21
AE014297-3747|AAF56428.1|   84|Drosophila melanogaster CG10423-P...    97   8e-21
AE014296-736|AAN11576.1|  456|Drosophila melanogaster CG32261-PA...    27   10.0 

>AY118959-1|AAM50819.1|   84|Drosophila melanogaster LD37859p
           protein.
          Length = 84

 Score = 97.1 bits (231), Expect = 8e-21
 Identities = 41/45 (91%), Positives = 44/45 (97%)
 Frame = -1

Query: 265 PGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRARLTEGCSFRRK 131
           PGCY+ITTVFSHAQ VVVCAGC+TILCQPTGGRA+LTEGCSFRRK
Sbjct: 38  PGCYRITTVFSHAQGVVVCAGCATILCQPTGGRAKLTEGCSFRRK 82



 Score = 72.5 bits (170), Expect = 2e-13
 Identities = 32/38 (84%), Positives = 33/38 (86%)
 Frame = -3

Query: 377 MPLAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKXP 264
           MPLA DLLHP PA E+RKHKLKRLV HPNSYFMDVK P
Sbjct: 1   MPLAKDLLHPLPAEEKRKHKLKRLVQHPNSYFMDVKCP 38


>AE014297-3747|AAF56428.1|   84|Drosophila melanogaster CG10423-PA
           protein.
          Length = 84

 Score = 97.1 bits (231), Expect = 8e-21
 Identities = 41/45 (91%), Positives = 44/45 (97%)
 Frame = -1

Query: 265 PGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRARLTEGCSFRRK 131
           PGCY+ITTVFSHAQ VVVCAGC+TILCQPTGGRA+LTEGCSFRRK
Sbjct: 38  PGCYRITTVFSHAQGVVVCAGCATILCQPTGGRAKLTEGCSFRRK 82



 Score = 72.5 bits (170), Expect = 2e-13
 Identities = 32/38 (84%), Positives = 33/38 (86%)
 Frame = -3

Query: 377 MPLAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKXP 264
           MPLA DLLHP PA E+RKHKLKRLV HPNSYFMDVK P
Sbjct: 1   MPLAKDLLHPLPAEEKRKHKLKRLVQHPNSYFMDVKCP 38


>AE014296-736|AAN11576.1|  456|Drosophila melanogaster CG32261-PA
           protein.
          Length = 456

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 9/35 (25%), Positives = 20/35 (57%)
 Frame = -1

Query: 295 LTLISWMLSXPGCYKITTVFSHAQRVVVCAGCSTI 191
           L +I   L     Y+++ + S+ +R+ +CA  +T+
Sbjct: 187 LAIIGLSLGEHALYQVSAILSYTRRIQMCANITTV 221


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,449,723
Number of Sequences: 53049
Number of extensions: 338163
Number of successful extensions: 726
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 699
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 726
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1251032760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)