Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_F18
         (689 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q70NW8 Cluster: NADH dehydrogenase subunit 6; n=3; Rhab...    39   0.10 
UniRef50_A7TTV9 Cluster: Putative uncharacterized protein; n=1; ...    36   0.71 
UniRef50_A3RE63 Cluster: NADH-ubiquinone oxidoreductase chain 4;...    36   0.93 
UniRef50_Q5FGB5 Cluster: Putative uncharacterized protein; n=3; ...    36   1.2  
UniRef50_A0BRZ2 Cluster: Chromosome undetermined scaffold_124, w...    34   2.9  
UniRef50_UPI00015B4782 Cluster: PREDICTED: similar to Lian-Aa1 r...    34   3.8  

>UniRef50_Q70NW8 Cluster: NADH dehydrogenase subunit 6; n=3;
           Rhabditida|Rep: NADH dehydrogenase subunit 6 -
           Strongyloides stercoralis
          Length = 144

 Score = 39.1 bits (87), Expect = 0.10
 Identities = 20/60 (33%), Positives = 31/60 (51%)
 Frame = -1

Query: 212 FLVA*IKIFTFYSDCSQFSYLHLNEFCHFLHYIYFV*RIFFLFFCVALNNDLCGFFYYSV 33
           FL     I  ++S  S++ Y+H+N F  F  +++F    FF F     +N L  FFYY +
Sbjct: 54  FLSGIFVIIVYFSSFSKYIYVHINFFPVFFVFLFFFFYSFFFFLDPIYHNSL-NFFYYDL 112


>UniRef50_A7TTV9 Cluster: Putative uncharacterized protein; n=1;
           Vanderwaltozyma polyspora DSM 70294|Rep: Putative
           uncharacterized protein - Vanderwaltozyma polyspora DSM
           70294
          Length = 236

 Score = 36.3 bits (80), Expect = 0.71
 Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
 Frame = -1

Query: 194 KIFTFYSDC-SQFSYLHLNEFC-HFLHYIYFV*RIFFLFFCVALNNDLCGFFYYSVCVAV 21
           ++F +Y++C +  S++H   +C H L+Y Y +  + FLFF +     LC     ++ + +
Sbjct: 37  QVFQYYNECYTLLSHVHTVPYCSHQLNYHYHLRSLGFLFFLLLCYVMLCYVITITITITI 96

Query: 20  VLL 12
            LL
Sbjct: 97  TLL 99


>UniRef50_A3RE63 Cluster: NADH-ubiquinone oxidoreductase chain 4;
           n=2; Metaseiulus occidentalis|Rep: NADH-ubiquinone
           oxidoreductase chain 4 - Metaseiulus occidentalis
           (western predatory mite)
          Length = 437

 Score = 35.9 bits (79), Expect = 0.93
 Identities = 21/87 (24%), Positives = 47/87 (54%)
 Frame = -1

Query: 272 HFVVLMVL*YYRFYTVDNAEFLVA*IKIFTFYSDCSQFSYLHLNEFCHFLHYIYFV*RIF 93
           + V +++  Y+ ++ VDN  +L+    I +FY       YL  N   + + Y++ +  +F
Sbjct: 35  YIVNIIIYDYFLYFFVDNISYLLV---ILSFYIIMLINIYL-FNFDDNKIMYLFNL-LVF 89

Query: 92  FLFFCVALNNDLCGFFYYSVCVAVVLL 12
           FLF+C  +NN +  + ++  C+  +++
Sbjct: 90  FLFYCFFVNNLILMYVFFEACLLPLMI 116


>UniRef50_Q5FGB5 Cluster: Putative uncharacterized protein; n=3;
           canis group|Rep: Putative uncharacterized protein -
           Ehrlichia ruminantium (strain Gardel)
          Length = 120

 Score = 35.5 bits (78), Expect = 1.2
 Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
 Frame = -1

Query: 260 LMVL*YYRFYTVDNAEFLVA*IKIFTFYSDCSQFSYLHLNEFCHF----LHYIYFV*RIF 93
           LM   +  F+T+ N  +L++ + +F F   C+ +SYLH   F  +    L YI ++   +
Sbjct: 24  LMTFMFTIFFTLYNRLWLMSLMSLFIFTGTCTMYSYLHCINFPTYLLLNLTYILYMAISY 83

Query: 92  FLFFCVALNNDLCGFFYYSVCVAVVLL 12
             ++C  L     G+  Y+V  A  L+
Sbjct: 84  SSWYCTKLRR--MGYKIYNVIFAENLI 108


>UniRef50_A0BRZ2 Cluster: Chromosome undetermined scaffold_124,
           whole genome shotgun sequence; n=2; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_124,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 496

 Score = 34.3 bits (75), Expect = 2.9
 Identities = 16/69 (23%), Positives = 37/69 (53%)
 Frame = -1

Query: 380 LVLRLEPLTLKFI*EAHEVKVLKFNLQEQEQRSITKHFVVLMVL*YYRFYTVDNAEFLVA 201
           L+L+ +P  ++++       VL F  +  E ++  KH +   ++  Y+F  ++  EF+  
Sbjct: 87  LILKFQPRLIRWVLIIINYGVLSFYYEPDEGKTQYKHQLSSALIVSYQFIVMNTGEFIDT 146

Query: 200 *IKIFTFYS 174
            +++ +FYS
Sbjct: 147 LVQVISFYS 155


>UniRef50_UPI00015B4782 Cluster: PREDICTED: similar to Lian-Aa1
           retrotransposon protein; n=1; Nasonia vitripennis|Rep:
           PREDICTED: similar to Lian-Aa1 retrotransposon protein -
           Nasonia vitripennis
          Length = 832

 Score = 33.9 bits (74), Expect = 3.8
 Identities = 16/30 (53%), Positives = 20/30 (66%)
 Frame = +3

Query: 288 LFLFLEIKFKDFNLVSFLYEL*SERLKPQN 377
           L LFLE  F DF LV  L+ + S+R +PQN
Sbjct: 229 LHLFLEANFPDFQLVKELWPIPSQRNRPQN 258


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 513,722,292
Number of Sequences: 1657284
Number of extensions: 8597579
Number of successful extensions: 15473
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 14951
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15427
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54132236449
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)