Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_F18
         (689 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    25   0.77 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.77 
AF146649-1|AAD38009.1|   96|Tribolium castaneum ultrathorax prot...    25   0.77 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   4.1  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    22   4.1  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    22   4.1  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      22   4.1  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      22   4.1  
X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       22   5.4  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    22   5.4  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    22   5.4  
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      21   9.5  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   9.5  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   9.5  

>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 24.6 bits (51), Expect = 0.77
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +2

Query: 32  IHCNKKSHTDHYLVPRRR 85
           +   K+ HT+HYL  RRR
Sbjct: 236 LELEKEFHTNHYLTRRRR 253


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.6 bits (51), Expect = 0.77
 Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
 Frame = -1

Query: 170 CSQFSYLHLNEFCHFLHYIYFV*RIF---FLFFCVALNNDLCGFFYYSVCVAVVLL 12
           C  +  LHL  F   ++Y Y    IF    LF+CV +      +FYY+  +  V L
Sbjct: 198 CLDYFTLHLL-FLPCIYYFYSAFIIFTIHLLFYCVLIILLCIYYFYYAFILFTVHL 252


>AF146649-1|AAD38009.1|   96|Tribolium castaneum ultrathorax
          protein.
          Length = 96

 Score = 24.6 bits (51), Expect = 0.77
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +2

Query: 32 IHCNKKSHTDHYLVPRRR 85
          +   K+ HT+HYL  RRR
Sbjct: 18 LELEKEFHTNHYLTRRRR 35


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -1

Query: 500 FVCTTVSYQ*SMKSPTNFNVL 438
           F CT V Y  +   P NFN++
Sbjct: 202 FACTHVIYAFATIDPHNFNMI 222


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -3

Query: 291 TKVNNKTFCSFDG 253
           T +N + FCSF G
Sbjct: 17  TNINGEEFCSFQG 29


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -3

Query: 291 TKVNNKTFCSFDG 253
           T +N + FCSF G
Sbjct: 19  TNINGEEFCSFQG 31


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -3

Query: 291 TKVNNKTFCSFDG 253
           T +N + FCSF G
Sbjct: 17  TNINGEEFCSFQG 29


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -3

Query: 291 TKVNNKTFCSFDG 253
           T +N + FCSF G
Sbjct: 19  TNINGEEFCSFQG 31


>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 32 IHCNKKSHTDHYLVPRRR 85
          +   K+ H +HYL  RRR
Sbjct: 19 LELEKEFHFNHYLTRRRR 36


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 32  IHCNKKSHTDHYLVPRRR 85
           +   K+ H +HYL  RRR
Sbjct: 170 LELEKEFHFNHYLTRRRR 187


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 32  IHCNKKSHTDHYLVPRRR 85
           +   K+ H +HYL  RRR
Sbjct: 229 LELEKEFHFNHYLTRRRR 246


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +2

Query: 23  RLHIHCNKKSHT 58
           R HIHC+ KS +
Sbjct: 90  RAHIHCSVKSES 101


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = -2

Query: 424  LVLYSVSNINN 392
            LV+YSV N+NN
Sbjct: 1019 LVIYSVFNMNN 1029


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = -2

Query: 424  LVLYSVSNINN 392
            LV+YSV N+NN
Sbjct: 1019 LVIYSVFNMNN 1029


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,001
Number of Sequences: 336
Number of extensions: 2625
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18114270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)