Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_F18
         (689 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    22   4.8  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    22   4.8  
M29494-1|AAA27729.1|   74|Apis mellifera protein ( Bee homeobox-...    22   6.3  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    22   6.3  

>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +3

Query: 450 ISWRFHRLLIRNGGTNKKNLFITM 521
           +S  F +LL       K+N FITM
Sbjct: 363 LSDNFQQLLFSKYDAKKRNFFITM 386


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 8/15 (53%), Positives = 13/15 (86%)
 Frame = +3

Query: 294 LFLEIKFKDFNLVSF 338
           +FL I+FK F+L++F
Sbjct: 135 IFLLIRFKSFSLLNF 149


>M29494-1|AAA27729.1|   74|Apis mellifera protein ( Bee
          homeobox-containing gene,partial cds, clone H15. ).
          Length = 74

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 32 IHCNKKSHTDHYLVPRRR 85
          +   K+ H +HYL  RRR
Sbjct: 21 LELEKEFHYNHYLTRRRR 38


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 234 KSIISQDHQNYKMFC 278
           KS    D + YKMFC
Sbjct: 190 KSCTDSDIEKYKMFC 204


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,344
Number of Sequences: 438
Number of extensions: 2782
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21073995
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)