Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_pT_F11
(706 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1791 - 39907362-39907453,39907682-39907753,39907941-399080... 87 2e-17
09_04_0633 - 19123930-19124009,19124240-19124344,19124453-191245... 82 5e-16
06_03_1031 - 27018871-27018916,27018987-27019110,27019251-270193... 69 5e-12
08_02_1322 + 26131395-26131599,26132382-26132468,26133119-261333... 66 2e-11
04_03_0532 - 16824394-16824447,16824545-16824665,16824748-168248... 66 3e-11
02_03_0280 - 17256524-17256733,17256838-17256958,17257318-172574... 63 2e-10
02_05_0767 + 31609773-31610174,31610409-31610501,31610608-316106... 52 6e-07
09_02_0288 + 6936867-6936879,6936965-6937038,6937445-6937588,693... 48 5e-06
01_06_1316 + 36245368-36245507,36247229-36247315,36248334-362484... 48 7e-06
04_04_0027 + 22232781-22233051,22234256-22234329,22234471-222346... 44 9e-05
09_01_0020 + 413723-413738,413867-413934,414849-415144,415275-41... 44 1e-04
08_02_1436 + 27083698-27084111,27084333-27084416,27084502-270845... 43 2e-04
05_05_0095 - 22347552-22347696,22347988-22348094,22348114-223482... 42 6e-04
09_01_0022 + 426649-426663,427170-427420,427479-427577,428321-42... 40 0.001
07_01_0635 + 4753919-4754090,4754200-4754258,4754377-4754432,475... 39 0.004
02_01_0126 + 924691-924839,925103-925220,925303-925389,925482-92... 37 0.018
01_05_0361 + 21377080-21377281,21378619-21378705,21379862-213801... 35 0.055
01_05_0372 + 21541220-21541457,21541832-21541912,21542027-215420... 34 0.096
01_05_0366 + 21419270-21419312,21420372-21420458,21420625-214209... 33 0.17
02_05_0823 - 32036445-32036546,32036867-32036919,32037513-320375... 33 0.22
01_05_0367 + 21427130-21427136,21427733-21427822,21427927-214281... 32 0.39
12_01_0295 + 2235209-2235263,2236182-2236361,2236478-2236567,223... 31 0.89
01_05_0359 + 21350580-21350829,21350990-21351064,21351156-213512... 29 4.8
07_03_0436 - 18188221-18188373,18189121-18189233,18189817-181898... 28 6.3
>01_06_1791 -
39907362-39907453,39907682-39907753,39907941-39908045,
39908212-39908302,39908787-39908849,39909448-39909497,
39909632-39909716
Length = 185
Score = 86.6 bits (205), Expect = 2e-17
Identities = 35/61 (57%), Positives = 48/61 (78%)
Frame = -2
Query: 366 KLQIGIKKRPEDCSIKSRKGDLLHMHYTGTLDDGTEFDSSIPRGNPLTFKLGSGQVIKGW 187
+LQIG+K +PE C++++ KGD + +HY G+L DG+ FDSS RG+P F LG+GQVIKGW
Sbjct: 39 ELQIGVKYKPESCTLQAHKGDKIKVHYRGSLTDGSVFDSSYDRGDPFEFTLGNGQVIKGW 98
Query: 186 D 184
D
Sbjct: 99 D 99
Score = 66.5 bits (155), Expect = 2e-11
Identities = 29/49 (59%), Positives = 35/49 (71%)
Frame = -3
Query: 182 QGLLGMCEGEQRKLVIPPELAYGSAGAPPKIPKSATLTFHVELVKIERK 36
QGLLGMC GE+RKL IP ++ YG G+PPKIP ATL F EL+ + K
Sbjct: 100 QGLLGMCVGEKRKLKIPAKMGYGERGSPPKIPGGATLIFDTELIAVNGK 148
>09_04_0633 -
19123930-19124009,19124240-19124344,19124453-19124543,
19124647-19124709,19126318-19126368,19126878-19126962,
19127102-19127283,19128493-19128582
Length = 248
Score = 81.8 bits (193), Expect = 5e-16
Identities = 33/53 (62%), Positives = 43/53 (81%)
Frame = -2
Query: 342 RPEDCSIKSRKGDLLHMHYTGTLDDGTEFDSSIPRGNPLTFKLGSGQVIKGWD 184
+PE CSI++ KGD + +HY G L DGT+FDSS RG+P+ F+LG+GQVIKGWD
Sbjct: 138 KPESCSIQAHKGDRVKVHYRGKLTDGTDFDSSYERGDPIEFELGTGQVIKGWD 190
Score = 63.7 bits (148), Expect = 1e-10
Identities = 28/46 (60%), Positives = 34/46 (73%)
Frame = -3
Query: 182 QGLLGMCEGEQRKLVIPPELAYGSAGAPPKIPKSATLTFHVELVKI 45
QG+LGMC GE+RKL IP +L YG+ G+PP IP ATL F ELV +
Sbjct: 191 QGILGMCVGEKRKLKIPSKLGYGAQGSPPTIPGGATLIFDTELVAV 236
>06_03_1031 -
27018871-27018916,27018987-27019110,27019251-27019311,
27019466-27019558,27019663-27020016
Length = 225
Score = 68.5 bits (160), Expect = 5e-12
Identities = 28/45 (62%), Positives = 35/45 (77%)
Frame = -2
Query: 318 SRKGDLLHMHYTGTLDDGTEFDSSIPRGNPLTFKLGSGQVIKGWD 184
+ +G L+ HYTG L+DGT FDSS RG PLTF++G G+VIKGWD
Sbjct: 111 AEQGQLIKAHYTGRLEDGTVFDSSYKRGKPLTFRVGVGEVIKGWD 155
Score = 41.9 bits (94), Expect = 5e-04
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 8/63 (12%)
Frame = -3
Query: 191 VGXQGLLGMCEGEQRKLVIPPELAYGSAGAPPK--------IPKSATLTFHVELVKIERK 36
VG +G+ M G +R L +PPELAYG+ GA + IP ++TL F VE+ ++
Sbjct: 159 VGGEGIPPMLAGGKRSLRLPPELAYGARGAGCRGWEPTSCVIPPNSTLLFDVEMFRVYID 218
Query: 35 DEL 27
EL
Sbjct: 219 TEL 221
>08_02_1322 +
26131395-26131599,26132382-26132468,26133119-26133372,
26133430-26133526,26133613-26133693,26133782-26133976,
26134093-26134182,26134296-26134471,26134565-26134687,
26134799-26134945,26135027-26135163,26135247-26135364,
26135462-26135518
Length = 588
Score = 66.5 bits (155), Expect = 2e-11
Identities = 29/42 (69%), Positives = 32/42 (76%)
Frame = -2
Query: 309 GDLLHMHYTGTLDDGTEFDSSIPRGNPLTFKLGSGQVIKGWD 184
GD + +HYTGTL DG +FDSS RG P FKLG GQVIKGWD
Sbjct: 64 GDEVEVHYTGTLLDGKKFDSSRDRGTPFKFKLGQGQVIKGWD 105
Score = 53.2 bits (122), Expect = 2e-07
Identities = 24/43 (55%), Positives = 30/43 (69%)
Frame = -3
Query: 179 GLLGMCEGEQRKLVIPPELAYGSAGAPPKIPKSATLTFHVELV 51
G+ M +GE IPP+LAYG +G+PP IP SATL F VEL+
Sbjct: 107 GIKTMKKGENAVFTIPPDLAYGESGSPPTIPASATLQFDVELL 149
Score = 34.3 bits (75), Expect = 0.096
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Frame = -3
Query: 182 QGLLGMCEGEQRKLVIPPELAYGSAGAPPK---IPKSATLTFHVELVKIERKDEL*LFQL 12
+ +L M GE + IPPE A+GS + +P ++T+ + VELV + E + L
Sbjct: 345 RAVLNMKNGEVALVTIPPEYAFGSTESKQDLAVVPPNSTVIYEVELVSFVKDKE--SWDL 402
Query: 11 TNT 3
NT
Sbjct: 403 NNT 405
>04_03_0532 -
16824394-16824447,16824545-16824665,16824748-16824875,
16825457-16825603,16825682-16825807,16825895-16826160,
16826259-16826453,16826577-16826657,16826756-16826830,
16827270-16827530,16827633-16827719,16827844-16828060
Length = 585
Score = 66.1 bits (154), Expect = 3e-11
Identities = 28/46 (60%), Positives = 33/46 (71%)
Frame = -2
Query: 321 KSRKGDLLHMHYTGTLDDGTEFDSSIPRGNPLTFKLGSGQVIKGWD 184
+ GD + +HYTGTL DGT+FDSS RG P F LG G+VIKGWD
Sbjct: 64 RPESGDEVQVHYTGTLLDGTKFDSSRDRGTPFKFSLGQGEVIKGWD 109
Score = 57.6 bits (133), Expect = 9e-09
Identities = 28/61 (45%), Positives = 40/61 (65%)
Frame = -3
Query: 233 TP*PSNLVLVKLLRVGXQGLLGMCEGEQRKLVIPPELAYGSAGAPPKIPKSATLTFHVEL 54
TP +L ++++ +G+ M +GEQ +PPELAYG AG+PP IP +ATL F VEL
Sbjct: 93 TPFKFSLGQGEVIKGWDEGIKTMKKGEQAVFTVPPELAYGEAGSPPAIPPNATLRFDVEL 152
Query: 53 V 51
+
Sbjct: 153 L 153
>02_03_0280 -
17256524-17256733,17256838-17256958,17257318-17257445,
17257603-17257671,17257757-17257882,17257970-17258235,
17258341-17258535,17258614-17258694,17258729-17258851,
17258941-17259201,17260044-17260130,17260260-17260578
Length = 661
Score = 62.9 bits (146), Expect = 2e-10
Identities = 28/42 (66%), Positives = 31/42 (73%)
Frame = -2
Query: 309 GDLLHMHYTGTLDDGTEFDSSIPRGNPLTFKLGSGQVIKGWD 184
GD + +HYTGTL DGT+FDSS R P F LG GQVIKGWD
Sbjct: 102 GDEVQVHYTGTLLDGTKFDSSRDRDAPFKFTLGQGQVIKGWD 143
Score = 52.8 bits (121), Expect = 3e-07
Identities = 25/46 (54%), Positives = 30/46 (65%)
Frame = -3
Query: 179 GLLGMCEGEQRKLVIPPELAYGSAGAPPKIPKSATLTFHVELVKIE 42
G+ M +GE IPPELAYG G+PP IP +ATL F VEL+ E
Sbjct: 145 GIKTMKKGENAIFTIPPELAYGEDGSPPVIPPNATLQFDVELISWE 190
Score = 34.7 bits (76), Expect = 0.072
Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Frame = -3
Query: 182 QGLLGMCEGEQRKLVIPPELAYGSAGAPPK---IPKSATLTFHVELVKIERKDE 30
+ +L M +GE + IPPE A+GS +P ++T+ + VELV +++ E
Sbjct: 394 KAVLSMKKGEVALVTIPPEYAFGSDETRQDLSVVPPNSTVYYEVELVSFDKEKE 447
>02_05_0767 +
31609773-31610174,31610409-31610501,31610608-31610668,
31610797-31610865,31611274-31611440
Length = 263
Score = 51.6 bits (118), Expect = 6e-07
Identities = 19/41 (46%), Positives = 30/41 (73%)
Frame = -2
Query: 312 KGDLLHMHYTGTLDDGTEFDSSIPRGNPLTFKLGSGQVIKG 190
+G L+++HYT DG FDS+ RG PLT +LG+G++++G
Sbjct: 129 RGQLINVHYTARFTDGIVFDSTYKRGRPLTMRLGAGKILRG 169
>09_02_0288 +
6936867-6936879,6936965-6937038,6937445-6937588,
6937754-6937958,6938552-6938852,6938952-6939150,
6939393-6939477,6939554-6939595,6939676-6939724,
6939872-6939941,6940296-6940301
Length = 395
Score = 48.4 bits (110), Expect = 5e-06
Identities = 21/53 (39%), Positives = 37/53 (69%)
Frame = -3
Query: 203 KLLRVGXQGLLGMCEGEQRKLVIPPELAYGSAGAPPKIPKSATLTFHVELVKI 45
K++R G+ GM G++RKL +PP + YGS A ++PK++++ + +ELVK+
Sbjct: 344 KVIRGWDVGICGMRVGDKRKLTVPPAMCYGSK-AIGEVPKNSSIIYEIELVKV 395
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/42 (45%), Positives = 27/42 (64%)
Frame = -2
Query: 309 GDLLHMHYTGTLDDGTEFDSSIPRGNPLTFKLGSGQVIKGWD 184
G + + Y GTL DG +S++ P FKLG+G+VI+GWD
Sbjct: 310 GSKVSIKYVGTLQDGKIVESNVGE-KPYKFKLGAGKVIRGWD 350
>01_06_1316 +
36245368-36245507,36247229-36247315,36248334-36248439,
36249028-36249204,36249296-36249375,36249432-36249440,
36249474-36249566,36249788-36249947
Length = 283
Score = 48.0 bits (109), Expect = 7e-06
Identities = 23/39 (58%), Positives = 29/39 (74%), Gaps = 3/39 (7%)
Frame = -3
Query: 158 GEQRKLVIPPELAYGSAGAPPKIP---KSATLTFHVELV 51
GE K+ PE AYG+AG+PP+IP +SATLTF VEL+
Sbjct: 172 GEVAKITCKPEYAYGAAGSPPEIPPEVQSATLTFEVELI 210
Score = 41.9 bits (94), Expect = 5e-04
Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = -2
Query: 327 SIKSRKGDLLHMHYTGTL-DDGTEFDSSIPRGNPLTFKLGSGQVIKGWD 184
SIK+ L +HY GTL ++G FD++ + +F++G G VIK WD
Sbjct: 115 SIKASASTLSTVHYEGTLAENGEVFDTTHEDNSVFSFEIGEGTVIKAWD 163
>04_04_0027 +
22232781-22233051,22234256-22234329,22234471-22234638,
22234812-22234971,22235062-22235145,22235781-22236078,
22236158-22236364,22236465-22236735,22236971-22237055,
22237141-22237182,22237302-22237350,22237825-22237894,
22238314-22238463,22238592-22238619,22238856-22238990,
22240693-22241469,22242133-22242192,22242367-22242413
Length = 991
Score = 44.4 bits (100), Expect = 9e-05
Identities = 21/46 (45%), Positives = 29/46 (63%)
Frame = -2
Query: 321 KSRKGDLLHMHYTGTLDDGTEFDSSIPRGNPLTFKLGSGQVIKGWD 184
K+ G + + Y G L +GT FDS++ R F+LG G+VIKGWD
Sbjct: 505 KASPGKKVSVKYIGKLKNGTIFDSTVGR-RAFDFRLGIGEVIKGWD 549
Score = 44.4 bits (100), Expect = 9e-05
Identities = 21/43 (48%), Positives = 30/43 (69%)
Frame = -3
Query: 179 GLLGMCEGEQRKLVIPPELAYGSAGAPPKIPKSATLTFHVELV 51
G+ GM G++R+L IPP + YG+ P IP+++TL F VELV
Sbjct: 551 GINGMRVGDKRRLTIPPSMGYGNKRMGP-IPQNSTLVFDVELV 592
>09_01_0020 +
413723-413738,413867-413934,414849-415144,415275-415400,
415484-415566,416514-416628,416755-416847,416963-417021,
417609-417684,417812-417901,418050-418202,418294-418480,
418752-418839,419077-419125,419233-419329
Length = 531
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/45 (46%), Positives = 30/45 (66%)
Frame = -3
Query: 173 LGMCEGEQRKLVIPPELAYGSAGAPPKIPKSATLTFHVELVKIER 39
LGM G +R+L IPP YG A PKIP ++ L + VEL++++R
Sbjct: 483 LGMRVGGKRRLTIPPAQGYGDV-ATPKIPANSWLVYEVELLEVKR 526
>08_02_1436 +
27083698-27084111,27084333-27084416,27084502-27084551,
27084676-27084724,27085471-27085545,27085724-27085837
Length = 261
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = -2
Query: 291 HYTGTLDDGTEFDSSIPRGNPLTFKLGSGQVIKGWD 184
+Y + +G FDSS+ +G P F++GSGQVIKG D
Sbjct: 170 NYVAMVPNGQIFDSSLEKGQPYIFRVGSGQVIKGLD 205
>05_05_0095 -
22347552-22347696,22347988-22348094,22348114-22348236,
22348325-22348458,22348766-22348874
Length = 205
Score = 41.5 bits (93), Expect = 6e-04
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Frame = -2
Query: 363 LQIGIKKRPEDCSIKSRKGDLLHMHYTGTL-DDGTEFDSSIPRGNPLTFKLGSGQVIKGW 187
L+ ++K +D + L+ +HY GTL ++G FD++ + +F++G G VIK W
Sbjct: 14 LKTVVRKAKDDAIAPTDSLPLVDVHYEGTLAENGEVFDTTHEDNSIFSFEIGQGAVIKAW 73
Query: 186 D 184
D
Sbjct: 74 D 74
Score = 37.5 bits (83), Expect = 0.010
Identities = 17/31 (54%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Frame = -3
Query: 158 GEQRKLVIPPELAYGSAGAPPKI-PKSATLT 69
GE K+ PE AYGSAG+PP+I PKS ++
Sbjct: 83 GEVAKITCKPEYAYGSAGSPPEIPPKSVAIS 113
>09_01_0022 +
426649-426663,427170-427420,427479-427577,428321-428473,
428893-429051,429146-429287,429460-429544,429629-429670,
429784-429832,430540-430639,431240-431287
Length = 380
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/46 (45%), Positives = 28/46 (60%)
Frame = -3
Query: 179 GLLGMCEGEQRKLVIPPELAYGSAGAPPKIPKSATLTFHVELVKIE 42
G+ GM G R+L IPP L YG G IP +A L F +EL+K++
Sbjct: 313 GIDGMRVGGIRRLGIPPHLGYGDVGR-GNIPPNAWLNFDIELLKVK 357
Score = 32.3 bits (70), Expect = 0.39
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = -2
Query: 309 GDLLHMHYTGTLDDGTEFDSSIPRGNPLT--FKLGSGQVIKGWD 184
G +++ Y L +G D P G T FKLG+G+VI GWD
Sbjct: 271 GKKVYVKYVCMLSNGDTVD---PTGESSTCKFKLGAGEVISGWD 311
>07_01_0635 +
4753919-4754090,4754200-4754258,4754377-4754432,
4754698-4754842,4755506-4755580,4755844-4755933,
4756218-4756295,4757879-4758376,4758512-4758997
Length = 552
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = -3
Query: 179 GLLGMCEGEQRKLVIPPELAYGSAGAPPKIPKSATL 72
G+ GM G QR +++PPELAYG G +IP +AT+
Sbjct: 190 GVEGMKVGGQRLIIVPPELAYGKKGV-QEIPPNATI 224
>02_01_0126 +
924691-924839,925103-925220,925303-925389,925482-925631,
925750-925809,925914-925976
Length = 208
Score = 36.7 bits (81), Expect = 0.018
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = -3
Query: 170 GMCEGEQRKLVIPPELAYGSAGAPPKIPKSATLTFHVELVKI 45
GM G +R++++PPEL YG G +IP A +EL+++
Sbjct: 162 GMKVGGKRRVIVPPELGYGKKGM-NEIPPDAPFELDIELLEV 202
>01_05_0361 +
21377080-21377281,21378619-21378705,21379862-21380134,
21380304-21380378,21380470-21380550,21380837-21381034,
21381145-21381234,21381310-21381467,21381619-21381741,
21381891-21382034,21382175-21382285,21382583-21382624,
21383043-21383261,21385319-21385627
Length = 703
Score = 35.1 bits (77), Expect = 0.055
Identities = 17/36 (47%), Positives = 23/36 (63%)
Frame = -2
Query: 294 MHYTGTLDDGTEFDSSIPRGNPLTFKLGSGQVIKGW 187
+H+TG DGT F S+ G PLTF LG V++G+
Sbjct: 68 VHFTGKRLDGTWFASTREDGVPLTFILGQENVMRGF 103
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Frame = -3
Query: 167 MCEGEQRKLVIPPELAYGSAGAP-----PKIPKSATLTFHVELV 51
M EGE+ L++ PE +G G P +P ATL +++L+
Sbjct: 226 MTEGEEAVLIVKPEYGFGERGRPSIGDEAGVPPDATLYVYLQLM 269
>01_05_0372 +
21541220-21541457,21541832-21541912,21542027-21542092,
21543050-21543178,21544619-21544674,21545451-21545732
Length = 283
Score = 34.3 bits (75), Expect = 0.096
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Frame = -3
Query: 167 MCEGEQRKLVIPPELAYGSAGAPPKIPKS----ATLTFHVELVKI 45
M GE+ IPP+LA +G+P IP S TL F +EL+ +
Sbjct: 1 MRPGERAIFTIPPKLAITKSGSPASIPSSIPPEQTLRFEIELISL 45
Score = 28.3 bits (60), Expect = 6.3
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 5/49 (10%)
Frame = -3
Query: 167 MCEGEQRKLVIPPELAYG-----SAGAPPKIPKSATLTFHVELVKIERK 36
M EGE+ ++ P A+G S G +P ATL +V+L ERK
Sbjct: 115 MREGEEAIFIVKPRYAFGAQGRDSTGDQAAVPPDATLYLYVQLA--ERK 161
>01_05_0366 +
21419270-21419312,21420372-21420458,21420625-21420900,
21421560-21421634,21421736-21421816,21422117-21422308,
21422756-21422772
Length = 256
Score = 33.5 bits (73), Expect = 0.17
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Frame = -2
Query: 324 IKSRKGDLLH----MHYTGTLDDGTEFDSSIPRGNPLTFKLGSGQVIKGWD 184
+KSR H +H+TG L DGT+F SS P F LG V+ G++
Sbjct: 1 MKSRSNKTWHKINGVHFTGELVDGTQFVSSRENDIPERFILGQEDVMHGFN 51
Score = 31.1 bits (67), Expect = 0.89
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Frame = -3
Query: 167 MCEGEQRKLVIPPELAYGSAGAPPK-----IPKSATLTFHVELV 51
M EGE+ L++ P+ A+G G P + +P ATL H+ V
Sbjct: 174 MKEGEEAVLIVKPKYAFGEQGRPSQGEEAAVPPDATLYVHLLFV 217
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 4/43 (9%)
Frame = -3
Query: 167 MCEGEQRKLVIPPELAYGSAGAPPKIPK----SATLTFHVELV 51
M GE+ IP L AG+P IP + TL F +EL+
Sbjct: 57 MQPGEKAIFTIPSALTMTKAGSPASIPSNIPPNQTLRFEIELI 99
>02_05_0823 -
32036445-32036546,32036867-32036919,32037513-32037574,
32037804-32037837,32038144-32038231
Length = 112
Score = 33.1 bits (72), Expect = 0.22
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
Frame = -2
Query: 321 KSRKGDLLHMHYTGTLDDGT---EFDSSIPRGN-PLTFKLGSGQVIKGWD 184
K KG + +H TG D +F S+ G P +F +G G VIKGWD
Sbjct: 15 KPVKGQKVTVHCTGFGKDNDLAKKFWSTKDAGQEPFSFNIGQGSVIKGWD 64
>01_05_0367 +
21427130-21427136,21427733-21427822,21427927-21428105,
21429115-21429432,21430537-21430563
Length = 206
Score = 32.3 bits (70), Expect = 0.39
Identities = 14/50 (28%), Positives = 30/50 (60%), Gaps = 4/50 (8%)
Frame = -3
Query: 182 QGLLGMCEGEQRKLVIPPELAYGSAGAPPK----IPKSATLTFHVELVKI 45
+ ++ M EGE + IPP+ A+ + G+ +P++AT+ + +EL+ +
Sbjct: 41 ESVMTMEEGEVAEFTIPPQHAFDAVGSDQHQFAFVPRNATVVYKIELLSV 90
>12_01_0295 +
2235209-2235263,2236182-2236361,2236478-2236567,
2236947-2237131,2237200-2237358,2237437-2237589,
2237938-2238264
Length = 382
Score = 31.1 bits (67), Expect = 0.89
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = -3
Query: 179 GLLGMCEGEQRKLVIPPELAYGSAG--APPKIPKSATLTFHVELVKIERKDEL 27
G+ M GE+ L + EL YG G + P +P A L + VEL+ + E+
Sbjct: 119 GVSNMRSGERALLHVNWELGYGKEGSFSFPNVPPMADLVYEVELIGFDDVKEV 171
>01_05_0359 +
21350580-21350829,21350990-21351064,21351156-21351236,
21352633-21352830,21352930-21353019,21353096-21353253,
21353350-21353472,21354989-21355096,21355530-21355826
Length = 459
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
Frame = -3
Query: 167 MCEGEQRKLVIPPELAYGS----AGAPPKIPKSATLTFHVELVKI 45
M GE+ IPPELA A P +P + L F VEL+ +
Sbjct: 6 MQAGEKAVFTIPPELAGTKSRCPADIPANLPPNQALQFDVELISL 50
>07_03_0436 -
18188221-18188373,18189121-18189233,18189817-18189889,
18189979-18190046,18190132-18190372,18191614-18191732,
18192977-18193028,18193178-18193192
Length = 277
Score = 28.3 bits (60), Expect = 6.3
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -3
Query: 131 PELAYGSAGAPPKIP 87
P L YGSAG PP IP
Sbjct: 82 PHLFYGSAGTPPPIP 96
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,852,558
Number of Sequences: 37544
Number of extensions: 259993
Number of successful extensions: 564
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 524
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 555
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1815633512
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -