Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_F11
         (706 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578802-1|AAT07307.1|  108|Anopheles gambiae FK506-binding prot...    63   9e-12
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    24   5.4  

>AY578802-1|AAT07307.1|  108|Anopheles gambiae FK506-binding protein
           protein.
          Length = 108

 Score = 62.9 bits (146), Expect = 9e-12
 Identities = 26/44 (59%), Positives = 31/44 (70%)
 Frame = -2

Query: 315 RKGDLLHMHYTGTLDDGTEFDSSIPRGNPLTFKLGSGQVIKGWD 184
           + G    +HYTGTLDDGT FDSS  RG P  F +G G+VI+GWD
Sbjct: 18  KPGQTAVVHYTGTLDDGTVFDSSRTRGKPFKFSVGKGEVIRGWD 61



 Score = 51.2 bits (117), Expect = 3e-08
 Identities = 24/54 (44%), Positives = 36/54 (66%)
 Frame = -3

Query: 203 KLLRVGXQGLLGMCEGEQRKLVIPPELAYGSAGAPPKIPKSATLTFHVELVKIE 42
           +++R   +G+  M  G++ KLV  P+ AYGS G P  IP +A LTF VEL+++E
Sbjct: 55  EVIRGWDEGVAQMSVGQRAKLVCSPDYAYGSRGHPGVIPPNARLTFDVELLRVE 108


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +3

Query: 60  YVKSKSSRLWYLWWCSS*TISQFWWNDK 143
           YV ++ S LW LW  S   I++  W  K
Sbjct: 112 YVVNEFSWLWLLWLLSQTWITRHLWMAK 139


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 617,200
Number of Sequences: 2352
Number of extensions: 10164
Number of successful extensions: 31
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71922660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)