Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_pT_F06
(629 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q2F5J1 Cluster: 26S proteasome non-ATPase regulatory su... 233 3e-60
UniRef50_Q7KMP8 Cluster: 26S proteasome regulatory complex subun... 74 3e-12
UniRef50_Q86EV4 Cluster: Clone ZZD1379 mRNA sequence; n=3; Bilat... 68 2e-10
UniRef50_Q9UNM6 Cluster: 26S proteasome non-ATPase regulatory su... 68 2e-10
UniRef50_A4SAU9 Cluster: Predicted protein; n=2; Ostreococcus|Re... 64 3e-09
UniRef50_Q10Q05 Cluster: PCI domain containing protein, expresse... 62 1e-08
UniRef50_Q4N2Q4 Cluster: 26S proteasome regulatory subunit, puta... 62 1e-08
UniRef50_Q8RWF0 Cluster: 26S proteasome subunit-like protein; n=... 61 2e-08
UniRef50_Q54NQ0 Cluster: 26S proteasome non-ATPase regulatory su... 61 2e-08
UniRef50_A2DH21 Cluster: PCI domain containing protein; n=1; Tri... 60 3e-08
UniRef50_Q22253 Cluster: Putative uncharacterized protein rpn-9;... 60 4e-08
UniRef50_Q5CNJ9 Cluster: 26S proteasome subunit P40.5; n=2; Cryp... 58 1e-07
UniRef50_Q9US13 Cluster: Probable 26S proteasome regulatory subu... 58 2e-07
UniRef50_Q4PBL8 Cluster: Putative uncharacterized protein; n=1; ... 58 2e-07
UniRef50_Q5KLK2 Cluster: Putative uncharacterized protein; n=1; ... 56 5e-07
UniRef50_Q4WLP7 Cluster: Proteasome regulatory particle subunit ... 53 5e-06
UniRef50_UPI0000498B22 Cluster: 26S proteasome regulatory subuni... 52 9e-06
UniRef50_Q23RE5 Cluster: PCI domain containing protein; n=1; Tet... 51 2e-05
UniRef50_UPI00015B4210 Cluster: PREDICTED: similar to 26S protea... 51 3e-05
UniRef50_A2DXD4 Cluster: PCI domain containing protein; n=1; Tri... 50 3e-05
UniRef50_A0DX64 Cluster: Chromosome undetermined scaffold_68, wh... 50 5e-05
UniRef50_Q04062 Cluster: 26S proteasome regulatory subunit RPN9;... 50 5e-05
UniRef50_UPI0001555322 Cluster: PREDICTED: similar to 26S protea... 48 2e-04
UniRef50_Q1JSW4 Cluster: 26s proteasome regulatory subunit rpn9,... 46 7e-04
UniRef50_Q8IJA0 Cluster: 26S proteasome subunit, putative; n=7; ... 44 0.002
UniRef50_A7PBB9 Cluster: Chromosome chr16 scaffold_10, whole gen... 42 0.009
UniRef50_Q5AD74 Cluster: Likely 26S proteasome regulatory partic... 42 0.009
UniRef50_Q387U2 Cluster: Proteasome regulatory non-ATP-ase subun... 41 0.021
UniRef50_Q6BZE7 Cluster: Debaryomyces hansenii chromosome A of s... 37 0.35
UniRef50_UPI0001554CB0 Cluster: PREDICTED: similar to LOC616722 ... 36 0.61
UniRef50_Q4QDA3 Cluster: Proteasome regulatory non-ATP-ase subun... 36 1.1
UniRef50_A5VCI2 Cluster: Putative uncharacterized protein; n=1; ... 35 1.4
UniRef50_A6WEW9 Cluster: Carbohydrate kinase FGGY; n=2; Frankine... 35 1.9
UniRef50_Q980Y2 Cluster: Primase; n=1; Sulfolobus solfataricus|R... 35 1.9
UniRef50_Q9N4C2 Cluster: Probable cleavage and polyadenylation s... 34 2.4
UniRef50_UPI000058412F Cluster: PREDICTED: similar to Peroxisome... 34 3.2
UniRef50_Q7JVI3 Cluster: LD23767p; n=8; Endopterygota|Rep: LD237... 33 4.3
UniRef50_Q5A7S6 Cluster: Putative uncharacterized protein; n=1; ... 33 7.5
UniRef50_O95817 Cluster: BAG family molecular chaperone regulato... 33 7.5
UniRef50_Q7ZYW6 Cluster: Origin recognition complex, subunit 1-l... 32 9.9
UniRef50_Q1DVN0 Cluster: Putative uncharacterized protein; n=1; ... 32 9.9
>UniRef50_Q2F5J1 Cluster: 26S proteasome non-ATPase regulatory
subunit 13; n=3; Coelomata|Rep: 26S proteasome
non-ATPase regulatory subunit 13 - Bombyx mori (Silk
moth)
Length = 385
Score = 233 bits (570), Expect = 3e-60
Identities = 123/193 (63%), Positives = 128/193 (66%)
Frame = -1
Query: 629 DGGEALPATXRADIAFRLALSGVLAPDVYDLGELLAHPILHSLRGTPNEWACELVKAVSV 450
DGGEALPAT RADIAFRLALSGVLAPDVYDLGELLAHPILHSLRGTPNEWACELVKAVSV
Sbjct: 192 DGGEALPATERADIAFRLALSGVLAPDVYDLGELLAHPILHSLRGTPNEWACELVKAVSV 251
Query: 449 GDVGAFERIRAKSNCDELHKADRQLRQKLRFCA*WRWPSINPHLRGSCXXXXXXXXPEYP 270
GDVGAFERIRAKSNCDELHKADRQLRQK+ + P
Sbjct: 252 GDVGAFERIRAKSNCDELHKADRQLRQKIAILCLMEMAFNKSSSQRKLSFEEIAREARIP 311
Query: 269 STKXXXXXXXXXXXXXLEDI*IRCXRARTVQWVRPRXXXXXXAVLTXARVDAWREXVSAA 90
+ + + TVQWVRPR AVLT ARVDAWRE VSAA
Sbjct: 312 LDEVELLIMKALAEKLIRGHIDQVRSCATVQWVRPRALAGAGAVLTAARVDAWREAVSAA 371
Query: 89 ADLLXTXQPDLII 51
ADLL T QPDLII
Sbjct: 372 ADLLATVQPDLII 384
Score = 118 bits (284), Expect = 1e-25
Identities = 59/61 (96%), Positives = 60/61 (98%)
Frame = -3
Query: 369 EIAILCLMEMAFNKSSSQRKLSXEEIAREARIPLDEVELLIMKALAEKLIRGHIDQVRSC 190
+IAILCLMEMAFNKSSSQRKLS EEIAREARIPLDEVELLIMKALAEKLIRGHIDQVRSC
Sbjct: 279 KIAILCLMEMAFNKSSSQRKLSFEEIAREARIPLDEVELLIMKALAEKLIRGHIDQVRSC 338
Query: 189 A 187
A
Sbjct: 339 A 339
>UniRef50_Q7KMP8 Cluster: 26S proteasome regulatory complex subunit
p39A; n=6; Diptera|Rep: 26S proteasome regulatory
complex subunit p39A - Drosophila melanogaster (Fruit
fly)
Length = 382
Score = 73.7 bits (173), Expect = 3e-12
Identities = 47/187 (25%), Positives = 78/187 (41%), Gaps = 1/187 (0%)
Frame = -1
Query: 611 PATXRADIAFRLALSGVLAPDVYDLGELLAHPILHSLRGTPNEWACELVKAVSVGDVGAF 432
P A AF L L+ +L VY++GELLAHPIL SL+GT NEW EL+KA + GD+ F
Sbjct: 194 PRDQWAQQAFFLGLAALLGDGVYNIGELLAHPILESLKGTENEWLMELLKAFNTGDINKF 253
Query: 431 ERI-RAKSNCDELHKADRQLRQKLRFCA*WRWPSINPHLRGSCXXXXXXXXPEYPSTKXX 255
+ + S +L + +LRQK+ + + + P+ +
Sbjct: 254 NDMKKIWSKIPDLAAQEVKLRQKISLLCLMEMTFKRSAIERAISFTDIAQETKLPAKEVE 313
Query: 254 XXXXXXXXXXXLEDI*IRCXRARTVQWVRPRXXXXXXAVLTXARVDAWREXVSAAADLLX 75
+ + + WV+PR V + +D W ++ L+
Sbjct: 314 LLIMKALALDLVRGEIDQVAGVVNMSWVQPRVLNRSQIVGMASTLDTWMGAITNMEKLME 373
Query: 74 TXQPDLI 54
+++
Sbjct: 374 NRAAEIL 380
Score = 72.9 bits (171), Expect = 6e-12
Identities = 34/62 (54%), Positives = 46/62 (74%)
Frame = -3
Query: 369 EIAILCLMEMAFNKSSSQRKLSXEEIAREARIPLDEVELLIMKALAEKLIRGHIDQVRSC 190
+I++LCLMEM F +S+ +R +S +IA+E ++P EVELLIMKALA L+RG IDQV
Sbjct: 276 KISLLCLMEMTFKRSAIERAISFTDIAQETKLPAKEVELLIMKALALDLVRGEIDQVAGV 335
Query: 189 AN 184
N
Sbjct: 336 VN 337
>UniRef50_Q86EV4 Cluster: Clone ZZD1379 mRNA sequence; n=3;
Bilateria|Rep: Clone ZZD1379 mRNA sequence - Schistosoma
japonicum (Blood fluke)
Length = 386
Score = 67.7 bits (158), Expect = 2e-10
Identities = 31/87 (35%), Positives = 53/87 (60%)
Frame = -3
Query: 444 RWCLREDPGQIQLRRITQSRQATETEIAILCLMEMAFNKSSSQRKLSXEEIAREARIPLD 265
RWC++ D + + ++ +LCL+EM F + +++R L+ EI+ R+P+D
Sbjct: 264 RWCVQAD--------LVAAEPKLRDKVTLLCLVEMIFRRPTNKRTLTFVEISSTTRVPID 315
Query: 264 EVELLIMKALAEKLIRGHIDQVRSCAN 184
+VE +MKAL+ KLI+G ID+V C +
Sbjct: 316 QVEHFLMKALSLKLIKGRIDEVNQCVS 342
Score = 58.0 bits (134), Expect = 2e-07
Identities = 29/76 (38%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Frame = -1
Query: 587 AFRLALSGVLAPDVYDLGELLAHPILHSLRGTPNEWACELVKAVSVGDVGAFERIRAKSN 408
AF + L+ VL VY GELL H IL SL+G+P W +L++A + GD+ +++R++
Sbjct: 207 AFSVGLAAVLGEGVYSFGELLTHDILKSLQGSPEAWLIDLLQAFNRGDLNQLDQLRSRWC 266
Query: 407 CD-ELHKADRQLRQKL 363
+L A+ +LR K+
Sbjct: 267 VQADLVAAEPKLRDKV 282
>UniRef50_Q9UNM6 Cluster: 26S proteasome non-ATPase regulatory
subunit 13; n=30; Eumetazoa|Rep: 26S proteasome
non-ATPase regulatory subunit 13 - Homo sapiens (Human)
Length = 376
Score = 67.7 bits (158), Expect = 2e-10
Identities = 30/57 (52%), Positives = 46/57 (80%)
Frame = -3
Query: 369 EIAILCLMEMAFNKSSSQRKLSXEEIAREARIPLDEVELLIMKALAEKLIRGHIDQV 199
+I +LCLMEM F + ++ R+L+ EEIA+ A+I ++EVELL+MKAL+ L++G ID+V
Sbjct: 271 KIQLLCLMEMTFTRPANHRQLTFEEIAKSAKITVNEVELLVMKALSVGLVKGSIDEV 327
Score = 59.7 bits (138), Expect = 6e-08
Identities = 30/86 (34%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Frame = -1
Query: 614 LPATXRADIAFRLALSGVLAPDVYDLGELLAHPILHSLRGTPNEWACELVKAVSVGDVGA 435
LP + + + AF L L+G+L V++ GELL HP+L SLR T +W + + A + G+V
Sbjct: 188 LPVSEQQERAFTLGLAGLLGEGVFNFGELLMHPVLESLRNTDRQWLIDTLYAFNSGNVER 247
Query: 434 FERIR-AKSNCDELHKADRQLRQKLR 360
F+ ++ A +L + QL +K++
Sbjct: 248 FQTLKTAWGQQPDLAANEAQLLRKIQ 273
>UniRef50_A4SAU9 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 398
Score = 64.1 bits (149), Expect = 3e-09
Identities = 48/181 (26%), Positives = 75/181 (41%), Gaps = 5/181 (2%)
Frame = -1
Query: 620 EALPATXRADIAFRLALSGVLAPDVYDLGELLAHPILHSLRGTPNEWACELVKAVSVGDV 441
E LPA RA ++ L L+ +L +VY+ ELLAHPI+ SL P W ++VKA + GD+
Sbjct: 205 EMLPAETRAALSVDLCLAALLGENVYNFAELLAHPIVESLNDGPFAWLMDVVKAFNEGDL 264
Query: 440 GAFERIRAKSNC-----DELHKADRQLRQKLRFCA*WRWPSINPHLRGSCXXXXXXXXPE 276
++++ K L +R+LR+K+ + + P +
Sbjct: 265 HEYDQLCVKHAAALNAQPALVANERRLREKITILSLLQIIFKLPAEHREISLSDIAVKTK 324
Query: 275 YPSTKXXXXXXXXXXXXXLEDI*IRCXRARTVQWVRPRXXXXXXAVLTXARVDAWREXVS 96
+ +E I + V WV+PR R+D W E VS
Sbjct: 325 LTTDGVEYLLMKALSVHLIEGIIDQVESKVIVTWVQPRVLLRSQIAELAGRLDGWIEKVS 384
Query: 95 A 93
A
Sbjct: 385 A 385
Score = 50.0 bits (114), Expect = 5e-05
Identities = 27/69 (39%), Positives = 42/69 (60%)
Frame = -3
Query: 399 ITQSRQATETEIAILCLMEMAFNKSSSQRKLSXEEIAREARIPLDEVELLIMKALAEKLI 220
+ R+ E +I IL L+++ F + R++S +IA + ++ D VE L+MKAL+ LI
Sbjct: 285 VANERRLRE-KITILSLLQIIFKLPAEHREISLSDIAVKTKLTTDGVEYLLMKALSVHLI 343
Query: 219 RGHIDQVRS 193
G IDQV S
Sbjct: 344 EGIIDQVES 352
>UniRef50_Q10Q05 Cluster: PCI domain containing protein, expressed;
n=8; Oryza sativa|Rep: PCI domain containing protein,
expressed - Oryza sativa subsp. japonica (Rice)
Length = 385
Score = 62.1 bits (144), Expect = 1e-08
Identities = 25/66 (37%), Positives = 46/66 (69%)
Frame = -1
Query: 620 EALPATXRADIAFRLALSGVLAPDVYDLGELLAHPILHSLRGTPNEWACELVKAVSVGDV 441
E+L + + D+AF L+L+ +L ++Y+ GELLAHPI++SL GT EW +++A + G++
Sbjct: 190 ESLSESFKLDLAFDLSLAALLGDNIYNFGELLAHPIINSLIGTKVEWVYHMLQAFNTGNL 249
Query: 440 GAFERI 423
++ +
Sbjct: 250 ALYQEL 255
Score = 54.0 bits (124), Expect = 3e-06
Identities = 26/69 (37%), Positives = 43/69 (62%)
Frame = -3
Query: 399 ITQSRQATETEIAILCLMEMAFNKSSSQRKLSXEEIAREARIPLDEVELLIMKALAEKLI 220
+ Q+ + +I ILCLME+ F+++S R + IA ++ + +VE L+MK+L+ LI
Sbjct: 269 LVQNERKLLEKINILCLMEIIFSRASEDRTIPLSVIAERTKLSISDVEYLLMKSLSVHLI 328
Query: 219 RGHIDQVRS 193
G ID+V S
Sbjct: 329 EGIIDEVDS 337
>UniRef50_Q4N2Q4 Cluster: 26S proteasome regulatory subunit,
putative; n=3; Piroplasmida|Rep: 26S proteasome
regulatory subunit, putative - Theileria parva
Length = 390
Score = 61.7 bits (143), Expect = 1e-08
Identities = 30/75 (40%), Positives = 43/75 (57%)
Frame = -3
Query: 420 GQIQLRRITQSRQATETEIAILCLMEMAFNKSSSQRKLSXEEIAREARIPLDEVELLIMK 241
GQI + ++ ++ LM +AF K + QR LS +EI +I +DEVE I+K
Sbjct: 268 GQITHSELNGHEPELRYKLTLIALMNLAFRKPNKQRSLSFQEIVEHCKIQMDEVEPFILK 327
Query: 240 ALAEKLIRGHIDQVR 196
AL LI+GHIDQ +
Sbjct: 328 ALGCNLIQGHIDQTQ 342
Score = 51.2 bits (117), Expect = 2e-05
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Frame = -1
Query: 599 RADIAFRLALSGVLAPDVYDLGELLAHPIL-HSLRGTPNEWACELVKAVSVGDVGAF--- 432
R IA + +S +LAPD + GEL+ PI+ H L+GT W E++ + G++ F
Sbjct: 203 RKTIAVTITISSILAPDSFGFGELIHQPIIEHYLKGTDYNWLYEVLLIFNEGNLQLFEEA 262
Query: 431 -ERIRAKSNCDELHKADRQLRQKLRFCA 351
ER + + EL+ + +LR KL A
Sbjct: 263 LERFKGQITHSELNGHEPELRYKLTLIA 290
>UniRef50_Q8RWF0 Cluster: 26S proteasome subunit-like protein; n=7;
core eudicotyledons|Rep: 26S proteasome subunit-like
protein - Arabidopsis thaliana (Mouse-ear cress)
Length = 386
Score = 61.3 bits (142), Expect = 2e-08
Identities = 28/66 (42%), Positives = 44/66 (66%)
Frame = -1
Query: 620 EALPATXRADIAFRLALSGVLAPDVYDLGELLAHPILHSLRGTPNEWACELVKAVSVGDV 441
E L + + D+AF L+LS +L ++Y+ GELLAHPIL SL GT EW +++A + GD+
Sbjct: 191 EDLSESFKLDLAFDLSLSALLGENIYNFGELLAHPILKSLLGTNVEWLYHILQAFNHGDL 250
Query: 440 GAFERI 423
++ +
Sbjct: 251 VQYQEL 256
Score = 50.0 bits (114), Expect = 5e-05
Identities = 25/86 (29%), Positives = 48/86 (55%)
Frame = -3
Query: 456 IGWRRWCLREDPGQIQLRRITQSRQATETEIAILCLMEMAFNKSSSQRKLSXEEIAREAR 277
+ ++ C + I + ++ + +I ILCL+E+ F++ + R + IA +
Sbjct: 251 VQYQELCRVHNASLIAQPALVENEKKLLEKINILCLIEIIFSRPAEDRTIPLSIIAERTK 310
Query: 276 IPLDEVELLIMKALAEKLIRGHIDQV 199
+ +++VE L+MK+L+ LI G IDQV
Sbjct: 311 LSIEDVEHLLMKSLSVHLIEGIIDQV 336
>UniRef50_Q54NQ0 Cluster: 26S proteasome non-ATPase regulatory
subunit 13; n=1; Dictyostelium discoideum AX4|Rep: 26S
proteasome non-ATPase regulatory subunit 13 -
Dictyostelium discoideum AX4
Length = 385
Score = 61.3 bits (142), Expect = 2e-08
Identities = 29/66 (43%), Positives = 45/66 (68%)
Frame = -3
Query: 399 ITQSRQATETEIAILCLMEMAFNKSSSQRKLSXEEIAREARIPLDEVELLIMKALAEKLI 220
IT + Q +I+IL L+E+AF S +R +S +IA+ ++PL E+E L+MK+L+ LI
Sbjct: 270 ITNNMQKLRQKISILSLLELAFRTPSDKRSISFSKIAQATKLPLGEIEHLLMKSLSLNLI 329
Query: 219 RGHIDQ 202
+G IDQ
Sbjct: 330 KGSIDQ 335
Score = 55.2 bits (127), Expect = 1e-06
Identities = 39/194 (20%), Positives = 77/194 (39%), Gaps = 5/194 (2%)
Frame = -1
Query: 620 EALPATXRADIAFRLALSGVLAPDVYDLGELLAHPILHSLRGTPNEWACELVKAVSVGDV 441
E + +A +A+ L ++ ++ +VY G+L+A+PIL +L G+ + W +KA ++GD+
Sbjct: 191 ETISQEEQASLAYNLCIAALVGENVYGFGDLIANPILKALEGSQHNWLIAFLKAFNIGDI 250
Query: 440 GAFERIRAK-----SNCDELHKADRQLRQKLRFCA*WRWPSINPHLRGSCXXXXXXXXPE 276
FE + ++ S + ++LRQK+ + P + S +
Sbjct: 251 QQFEGLMSQHRDIISTQTAITNNMQKLRQKISILSLLELAFRTPSDKRSISFSKIAQATK 310
Query: 275 YPSTKXXXXXXXXXXXXXLEDI*IRCXRARTVQWVRPRXXXXXXAVLTXARVDAWREXVS 96
P + ++ + + WV PR R+ W E
Sbjct: 311 LPLGEIEHLLMKSLSLNLIKGSIDQTVEIIHITWVTPRILDLNQINSMNNRIAEWTEKAK 370
Query: 95 AAADLLXTXQPDLI 54
+ L+ DL+
Sbjct: 371 TSLRLVEDDTVDLV 384
>UniRef50_A2DH21 Cluster: PCI domain containing protein; n=1;
Trichomonas vaginalis G3|Rep: PCI domain containing
protein - Trichomonas vaginalis G3
Length = 369
Score = 60.5 bits (140), Expect = 3e-08
Identities = 28/65 (43%), Positives = 43/65 (66%)
Frame = -3
Query: 393 QSRQATETEIAILCLMEMAFNKSSSQRKLSXEEIAREARIPLDEVELLIMKALAEKLIRG 214
Q + + +IA+ +++ F + R S EEI+RE +PLD VE+L+MKAL+ +LIRG
Sbjct: 256 QFKVPIQQKIALSVFLQLIFARPFESRIFSFEEISRECHVPLDRVEILVMKALSTELIRG 315
Query: 213 HIDQV 199
ID+V
Sbjct: 316 EIDEV 320
Score = 46.0 bits (104), Expect = 7e-04
Identities = 22/59 (37%), Positives = 32/59 (54%)
Frame = -1
Query: 590 IAFRLALSGVLAPDVYDLGELLAHPILHSLRGTPNEWACELVKAVSVGDVGAFERIRAK 414
IA+ L +S + + V GEL +H IL SL GTPNEW L+ ++ G+ + K
Sbjct: 185 IAYDLCMSALFSISVCSFGELASHKILDSLVGTPNEWLRNLILLLNKGEPSSIPEFNEK 243
>UniRef50_Q22253 Cluster: Putative uncharacterized protein rpn-9;
n=2; Caenorhabditis|Rep: Putative uncharacterized
protein rpn-9 - Caenorhabditis elegans
Length = 387
Score = 60.1 bits (139), Expect = 4e-08
Identities = 27/57 (47%), Positives = 43/57 (75%)
Frame = -3
Query: 369 EIAILCLMEMAFNKSSSQRKLSXEEIAREARIPLDEVELLIMKALAEKLIRGHIDQV 199
+I ++ +ME+A ++ + R +S +EIA + +IP DEVE L+MKAL++ LIRG I+QV
Sbjct: 280 KIRLMAVMELAVSRPTKARSVSFKEIATKCQIPFDEVEFLVMKALSKDLIRGDINQV 336
Score = 58.8 bits (136), Expect = 1e-07
Identities = 42/179 (23%), Positives = 70/179 (39%), Gaps = 1/179 (0%)
Frame = -1
Query: 587 AFRLALSGVLAPDVYDLGELLAHPILHSLRGTPNEWACELVKAVSVGDVGAFERIRAK-S 411
A L + +L +V++ GELLAHPIL SL GT W +++ A + GD+ F +
Sbjct: 206 AVLLGFAALLGENVHNFGELLAHPILKSLEGTRERWIVDVLLAFNSGDLTRFFSLEGDWG 265
Query: 410 NCDELHKADRQLRQKLRFCA*WRWPSINPHLRGSCXXXXXXXXPEYPSTKXXXXXXXXXX 231
D+L K L K+R A P S + P +
Sbjct: 266 GWDDLKKQKDFLTAKIRLMAVMELAVSRPTKARSVSFKEIATKCQIPFDEVEFLVMKALS 325
Query: 230 XXXLEDI*IRCXRARTVQWVRPRXXXXXXAVLTXARVDAWREXVSAAADLLXTXQPDLI 54
+ + + V WV+PR + R+ AWR V++ ++ +++
Sbjct: 326 KDLIRGDINQVEQVVYVTWVQPRVLDNPQIMQMATRISAWRNDVNSMEGIVSKEAREIL 384
>UniRef50_Q5CNJ9 Cluster: 26S proteasome subunit P40.5; n=2;
Cryptosporidium|Rep: 26S proteasome subunit P40.5 -
Cryptosporidium hominis
Length = 430
Score = 58.4 bits (135), Expect = 1e-07
Identities = 28/63 (44%), Positives = 43/63 (68%)
Frame = -3
Query: 390 SRQATETEIAILCLMEMAFNKSSSQRKLSXEEIAREARIPLDEVELLIMKALAEKLIRGH 211
+R + A L LM++AF K+ ++R L+ +EIA+ RI +E+ELL+MKA+ LI+G
Sbjct: 317 ARVCITKKTATLALMDLAFRKNKNERVLTFDEIAKHCRIGANEIELLVMKAINMNLIKGI 376
Query: 210 IDQ 202
IDQ
Sbjct: 377 IDQ 379
Score = 32.3 bits (70), Expect = 9.9
Identities = 10/35 (28%), Positives = 24/35 (68%)
Frame = -1
Query: 614 LPATXRADIAFRLALSGVLAPDVYDLGELLAHPIL 510
+P + + + L ++ V++ ++Y++GEL+ HPI+
Sbjct: 217 IPYKEKPFLVYELIMAAVISEEIYNMGELVLHPIV 251
>UniRef50_Q9US13 Cluster: Probable 26S proteasome regulatory subunit
rpn9; n=1; Schizosaccharomyces pombe|Rep: Probable 26S
proteasome regulatory subunit rpn9 - Schizosaccharomyces
pombe (Fission yeast)
Length = 381
Score = 58.0 bits (134), Expect = 2e-07
Identities = 33/86 (38%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Frame = -1
Query: 605 TXRADIAFRLALSGVLAPDVYDLGELLAHPILHSLRGTPNEWACELVKAVSVGDVGAFER 426
T + A L+++ +L D+Y+ GELL HP+ L GT +EW +LV A++VGD+ FER
Sbjct: 197 TELVERAVDLSVAAILG-DIYNFGELLLHPVFELLVGTQHEWLHDLVIAMNVGDLPLFER 255
Query: 425 IRAKSN-CDELHKADRQLRQKLRFCA 351
+ + N L + L QK+R A
Sbjct: 256 LMGQINKMPLLQSSVALLGQKIRLMA 281
Score = 58.0 bits (134), Expect = 2e-07
Identities = 34/75 (45%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Frame = -3
Query: 420 GQIQLRRITQSRQAT-ETEIAILCLMEMAFNKSSSQRKLSXEEIAREARIPLDEVELLIM 244
GQI + QS A +I ++ L+E+ F +QR L+ + IAR RIP +EVELLIM
Sbjct: 258 GQINKMPLLQSSVALLGQKIRLMALIELVFQLPPNQRTLTFDTIARATRIPSNEVELLIM 317
Query: 243 KALAEKLIRGHIDQV 199
+AL+ LI G ID+V
Sbjct: 318 RALSVGLITGVIDEV 332
>UniRef50_Q4PBL8 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 395
Score = 57.6 bits (133), Expect = 2e-07
Identities = 26/61 (42%), Positives = 41/61 (67%)
Frame = -3
Query: 369 EIAILCLMEMAFNKSSSQRKLSXEEIAREARIPLDEVELLIMKALAEKLIRGHIDQVRSC 190
++ ++ L+E F +++ R + IA E ++P+DEVE L+MKAL+ KLIRG +DQV
Sbjct: 288 KMCLMSLIESVFKRAADDRTIGFATIAAETKLPVDEVEHLVMKALSLKLIRGTLDQVEQL 347
Query: 189 A 187
A
Sbjct: 348 A 348
Score = 50.8 bits (116), Expect = 3e-05
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Frame = -1
Query: 599 RADIAFRLALSGVLAPDVYDLGELLAHPILHSL-RGTPNEWACELVKAVSVGDVGAFERI 423
R A L++S +L +Y+ GELL HPIL SL + + W E++ A + GD+G FE +
Sbjct: 209 RVQRAHDLSISALLGDTIYNFGELLLHPILASLGKSAQHSWLSEMLFAFNAGDIGRFEAL 268
>UniRef50_Q5KLK2 Cluster: Putative uncharacterized protein; n=1;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 412
Score = 56.4 bits (130), Expect = 5e-07
Identities = 31/90 (34%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
Frame = -1
Query: 629 DGGEALPATXRADIAFRLALSGVLAPDVYDLGELLAHPILHSLRGTPNEWACELVKAVSV 450
D L A R A L ++ +L +Y+ GELL HPIL +L GT EW ++ A +
Sbjct: 212 DVNAELEAEDRKSRAHDLCIAALLGETIYNFGELLQHPILQTLVGTEYEWIKSMISAFNA 271
Query: 449 GDVGAFERIRAKSNCDELHKADRQ-LRQKL 363
G++G FE + + + +A LRQK+
Sbjct: 272 GEIGKFESLCNNLPNEPILEASLSFLRQKI 301
Score = 46.8 bits (106), Expect = 4e-04
Identities = 25/64 (39%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Frame = -3
Query: 369 EIAILCLMEMAFNK--SSSQRKLSXEEIAREARIPLDEVELLIMKALAEKLIRGHIDQVR 196
+I ++ L++ F + S R ++ + I R+P+ EVE LIMKAL+ LIRG +DQV
Sbjct: 300 KICLMALIQTVFARPRDGSSRLMTFQSIGEATRLPVHEVEHLIMKALSLGLIRGSLDQVD 359
Query: 195 SCAN 184
A+
Sbjct: 360 GTAD 363
>UniRef50_Q4WLP7 Cluster: Proteasome regulatory particle subunit
(RpnI), putative; n=18; Ascomycota|Rep: Proteasome
regulatory particle subunit (RpnI), putative -
Aspergillus fumigatus (Sartorya fumigata)
Length = 405
Score = 53.2 bits (122), Expect = 5e-06
Identities = 29/89 (32%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Frame = -1
Query: 614 LPATXRADIAFRLALSGVLAPDVYDLGELLAHPILHSLRGTPNEWACELVKAVSVGDVGA 435
L + R A+ L+++ +++ +Y+ GELL HPIL SL TP+ W +L+ A + GD+ A
Sbjct: 216 LSESERVSRAYSLSVAALVSDTIYNFGELLLHPILDSLTETPHSWLRDLLFAFNRGDLTA 275
Query: 434 FERIRAKSNCDELHKADR-QLRQKLRFCA 351
++ + + ++L + R L QK+ A
Sbjct: 276 YDVLAGNISKNKLLEQHRIFLYQKISLSA 304
Score = 48.0 bits (109), Expect = 2e-04
Identities = 25/71 (35%), Positives = 40/71 (56%)
Frame = -3
Query: 399 ITQSRQATETEIAILCLMEMAFNKSSSQRKLSXEEIAREARIPLDEVELLIMKALAEKLI 220
+ Q R +I++ L EM F + R L+ I+ E ++ +E+E L+MKAL+ L+
Sbjct: 289 LEQHRIFLYQKISLSALTEMVFRRPPHDRNLTFASISSETKVKPEEIEHLVMKALSLGLL 348
Query: 219 RGHIDQVRSCA 187
+G IDQV A
Sbjct: 349 KGAIDQVAQVA 359
>UniRef50_UPI0000498B22 Cluster: 26S proteasome regulatory subunit;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: 26S proteasome
regulatory subunit - Entamoeba histolytica HM-1:IMSS
Length = 377
Score = 52.4 bits (120), Expect = 9e-06
Identities = 24/69 (34%), Positives = 42/69 (60%)
Frame = -3
Query: 399 ITQSRQATETEIAILCLMEMAFNKSSSQRKLSXEEIAREARIPLDEVELLIMKALAEKLI 220
+ Q++ + +I+ LMEM F S R S ++I+ +P++ VE+LIM+AL+ L+
Sbjct: 265 LKQNKNQILEKASIVSLMEMIFRSPSQNRTFSFDQISSTTHVPIEYVEILIMRALSLGLV 324
Query: 219 RGHIDQVRS 193
+G+I Q S
Sbjct: 325 KGYISQTTS 333
>UniRef50_Q23RE5 Cluster: PCI domain containing protein; n=1;
Tetrahymena thermophila SB210|Rep: PCI domain containing
protein - Tetrahymena thermophila SB210
Length = 378
Score = 51.2 bits (117), Expect = 2e-05
Identities = 24/81 (29%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Frame = -3
Query: 435 LREDPGQIQLRRITQSRQAT-ETEIAILCLMEMAFNKSSSQRKLSXEEIAREARIPLDEV 259
L+ QI+ + S Q E +I I+ +++ FN + R +S +++A + P++E+
Sbjct: 251 LKSFDAQIKQNALLVSNQKLLEEKIRIMAFLDLVFNLPKNDRTISFQKVAERTKQPVNEI 310
Query: 258 ELLIMKALAEKLIRGHIDQVR 196
E L+M+++A L++G I+QV+
Sbjct: 311 EYLLMRSMALGLVKGSINQVQ 331
>UniRef50_UPI00015B4210 Cluster: PREDICTED: similar to 26S
proteasome non-ATPase regulatory subunit 13; n=1;
Nasonia vitripennis|Rep: PREDICTED: similar to 26S
proteasome non-ATPase regulatory subunit 13 - Nasonia
vitripennis
Length = 311
Score = 50.8 bits (116), Expect = 3e-05
Identities = 23/43 (53%), Positives = 32/43 (74%)
Frame = -3
Query: 312 KLSXEEIAREARIPLDEVELLIMKALAEKLIRGHIDQVRSCAN 184
+L+ EI++E +P+ EVELL+MKALA+ L+RG IDQV N
Sbjct: 224 QLTFAEISQETHLPIGEVELLVMKALAQGLVRGAIDQVAGTVN 266
>UniRef50_A2DXD4 Cluster: PCI domain containing protein; n=1;
Trichomonas vaginalis G3|Rep: PCI domain containing
protein - Trichomonas vaginalis G3
Length = 366
Score = 50.4 bits (115), Expect = 3e-05
Identities = 21/62 (33%), Positives = 37/62 (59%)
Frame = -3
Query: 384 QATETEIAILCLMEMAFNKSSSQRKLSXEEIAREARIPLDEVELLIMKALAEKLIRGHID 205
Q E +I + + F K RK+ EI+ +IP+++VE L++KA A +I+G+ID
Sbjct: 258 QMIEDKIVMSIFYTLVFKKPFKNRKIQFSEISEACQIPIEKVEYLVLKAFAHDIIKGYID 317
Query: 204 QV 199
++
Sbjct: 318 EI 319
Score = 47.6 bits (108), Expect = 2e-04
Identities = 20/49 (40%), Positives = 31/49 (63%)
Frame = -1
Query: 590 IAFRLALSGVLAPDVYDLGELLAHPILHSLRGTPNEWACELVKAVSVGD 444
IA+ + ++ +LA DV EL +HPIL+SL+ T NEW L+ + G+
Sbjct: 184 IAYDMCIAALLATDVISFQELASHPILNSLKATDNEWIRNLIILIDTGE 232
>UniRef50_A0DX64 Cluster: Chromosome undetermined scaffold_68, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_68,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 368
Score = 50.0 bits (114), Expect = 5e-05
Identities = 19/58 (32%), Positives = 41/58 (70%)
Frame = -3
Query: 369 EIAILCLMEMAFNKSSSQRKLSXEEIAREARIPLDEVELLIMKALAEKLIRGHIDQVR 196
+I I+ +E+AF+ + R + EE+A+ + +PL ++E L+M+ +++ L++G I+QV+
Sbjct: 264 KIRIMAFLELAFSLPKNNRVCTFEELAQVSELPLSDIERLVMRTISKGLVKGRINQVK 321
Score = 36.7 bits (81), Expect = 0.46
Identities = 15/61 (24%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Frame = -1
Query: 599 RADIAFRLALSGVLAPDVYDLGELLAHPILHSLR-GTPNEWACELVKAVSVGDVGAFERI 423
+ +++ +AL+ +++P++Y+ ELL P+L SL+ + W +L+ + G V +
Sbjct: 186 KVQLSYEMALAVLISPNIYNFSELLQQPVLVSLKESSQYNWVYQLLDIFNRGSVSELKNF 245
Query: 422 R 420
+
Sbjct: 246 Q 246
>UniRef50_Q04062 Cluster: 26S proteasome regulatory subunit RPN9;
n=6; Saccharomycetales|Rep: 26S proteasome regulatory
subunit RPN9 - Saccharomyces cerevisiae (Baker's yeast)
Length = 393
Score = 50.0 bits (114), Expect = 5e-05
Identities = 28/82 (34%), Positives = 49/82 (59%), Gaps = 3/82 (3%)
Frame = -1
Query: 599 RADIAFRLALSGVLAPDVYDLGELLAHPILHSLRGTPN-EWACELVKAVSVGDVGAFER- 426
R +A+ L++S +L +Y+ GELL HPI+ ++ N +W +L+ A++VGD F+
Sbjct: 210 RQQLAYDLSISALLGDKIYNFGELLHHPIMETIVNDSNYDWLFQLLNALTVGDFDKFDSL 269
Query: 425 IRAK-SNCDELHKADRQLRQKL 363
I+ + S L + + LRQK+
Sbjct: 270 IKVQISKIPILAQHESFLRQKI 291
Score = 46.0 bits (104), Expect = 7e-04
Identities = 24/67 (35%), Positives = 40/67 (59%)
Frame = -3
Query: 399 ITQSRQATETEIAILCLMEMAFNKSSSQRKLSXEEIAREARIPLDEVELLIMKALAEKLI 220
+ Q +I ++ L+E F K+ R LS E+I++ +P D VE L+M+A++ L+
Sbjct: 280 LAQHESFLRQKICLMTLIETVFVKNI--RMLSFEDISKATHLPKDNVEHLVMRAISLGLL 337
Query: 219 RGHIDQV 199
+G IDQV
Sbjct: 338 KGSIDQV 344
>UniRef50_UPI0001555322 Cluster: PREDICTED: similar to 26S
proteasome non-ATPase regulatory subunit 13 (26S
proteasome regulatory subunit S11) (26S proteasome
regulatory subunit p40.5), partial; n=1; Ornithorhynchus
anatinus|Rep: PREDICTED: similar to 26S proteasome
non-ATPase regulatory subunit 13 (26S proteasome
regulatory subunit S11) (26S proteasome regulatory
subunit p40.5), partial - Ornithorhynchus anatinus
Length = 285
Score = 47.6 bits (108), Expect = 2e-04
Identities = 22/61 (36%), Positives = 36/61 (59%)
Frame = -1
Query: 599 RADIAFRLALSGVLAPDVYDLGELLAHPILHSLRGTPNEWACELVKAVSVGDVGAFERIR 420
R A L L+G++ VY+ +L HP+L SLRGT +W + + A + G+V F+ ++
Sbjct: 179 RCPAADPLHLAGLVTEGVYNFTMMLMHPVLESLRGTDRQWLIDTLFAFNSGNVEKFQALK 238
Query: 419 A 417
A
Sbjct: 239 A 239
>UniRef50_Q1JSW4 Cluster: 26s proteasome regulatory subunit rpn9,
putative; n=1; Toxoplasma gondii|Rep: 26s proteasome
regulatory subunit rpn9, putative - Toxoplasma gondii
Length = 511
Score = 46.0 bits (104), Expect = 7e-04
Identities = 20/44 (45%), Positives = 33/44 (75%)
Frame = -3
Query: 327 SSSQRKLSXEEIAREARIPLDEVELLIMKALAEKLIRGHIDQVR 196
S++ R LS + IA ++ D+VE L+M+A+++KL+RG IDQV+
Sbjct: 418 SAASRSLSFDLIANSCKVSEDDVEHLVMRAMSQKLMRGSIDQVK 461
Score = 44.0 bits (99), Expect = 0.003
Identities = 20/67 (29%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Frame = -1
Query: 617 ALPATXRADIAFRLALSGVLAPDVYDLGELLAHP-ILHSLRGTP-NEWACELVKAVSVGD 444
++P R +A+ +A++ ++APD+++ GEL+ IL +L+ P ++W ++A G
Sbjct: 280 SIPEKDRVGLAYEIAIAALVAPDIFNFGELMQQALILATLKSMPEHQWLWSFLEAFHCGS 339
Query: 443 VGAFERI 423
+ FE I
Sbjct: 340 LPQFESI 346
>UniRef50_Q8IJA0 Cluster: 26S proteasome subunit, putative; n=7;
Plasmodium|Rep: 26S proteasome subunit, putative -
Plasmodium falciparum (isolate 3D7)
Length = 393
Score = 44.4 bits (100), Expect = 0.002
Identities = 18/58 (31%), Positives = 38/58 (65%)
Frame = -3
Query: 369 EIAILCLMEMAFNKSSSQRKLSXEEIAREARIPLDEVELLIMKALAEKLIRGHIDQVR 196
++ +L LM++AF K + +S EIA+ +I ++EVE +++ A ++ +I ID+++
Sbjct: 287 KMTLLALMDLAFKKKKQREDISFHEIAQHCKIDINEVEKMLITAKSKNIITCKIDEIQ 344
Score = 32.3 bits (70), Expect = 9.9
Identities = 14/64 (21%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = -1
Query: 599 RADIAFRLALSGVLAPDVYDLGELLAHPILHSL--RGTPNEWACELVKAVSVGDVGAFER 426
R DI + + +++ +VY++GE++ P+++ W EL+ + G++ +F
Sbjct: 204 RIDIGTYICIHSIISENVYNIGEIIQLPLINVCIKNNEETNWLYELIYIYNEGNIDSFNE 263
Query: 425 IRAK 414
K
Sbjct: 264 TIGK 267
>UniRef50_A7PBB9 Cluster: Chromosome chr16 scaffold_10, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr16 scaffold_10, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 170
Score = 42.3 bits (95), Expect = 0.009
Identities = 26/71 (36%), Positives = 40/71 (56%)
Frame = -3
Query: 414 IQLRRITQSRQATETEIAILCLMEMAFNKSSSQRKLSXEEIAREARIPLDEVELLIMKAL 235
+QL I ++ +E +I ILCLME+ F S K++ IA ++ + VE +MK+L
Sbjct: 92 VQLALIENDKKLSE-KINILCLMELIF---SHPLKIALHIIAESMKLSIANVEYFLMKSL 147
Query: 234 AEKLIRGHIDQ 202
LI G +DQ
Sbjct: 148 LVHLIEGIVDQ 158
>UniRef50_Q5AD74 Cluster: Likely 26S proteasome regulatory particle
subunit Rpn9p; n=2; Saccharomycetales|Rep: Likely 26S
proteasome regulatory particle subunit Rpn9p - Candida
albicans (Yeast)
Length = 416
Score = 42.3 bits (95), Expect = 0.009
Identities = 20/56 (35%), Positives = 38/56 (67%)
Frame = -3
Query: 369 EIAILCLMEMAFNKSSSQRKLSXEEIAREARIPLDEVELLIMKALAEKLIRGHIDQ 202
++ I+ L+E+ S+ +KLS + I+ + P+D+VEL+I+K ++ LI G+I+Q
Sbjct: 324 KLTIMALLELV----SADKKLSFDIISEKTNTPIDQVELIIIKTMSLHLIEGYINQ 375
>UniRef50_Q387U2 Cluster: Proteasome regulatory non-ATP-ase subunit
9; n=3; Trypanosoma|Rep: Proteasome regulatory
non-ATP-ase subunit 9 - Trypanosoma brucei
Length = 405
Score = 41.1 bits (92), Expect = 0.021
Identities = 19/65 (29%), Positives = 38/65 (58%)
Frame = -3
Query: 399 ITQSRQATETEIAILCLMEMAFNKSSSQRKLSXEEIAREARIPLDEVELLIMKALAEKLI 220
+T++ + ++ ++ L+ + F ++R + + IAR +PL VE L++ ALA+ +I
Sbjct: 290 LTRALASVVHKVRLMALLHLVFYTPFNERTFAFDLIARRCAVPLKRVEPLLLAALAQGII 349
Query: 219 RGHID 205
G ID
Sbjct: 350 IGKID 354
>UniRef50_Q6BZE7 Cluster: Debaryomyces hansenii chromosome A of
strain CBS767 of Debaryomyces hansenii; n=3;
Saccharomycetaceae|Rep: Debaryomyces hansenii chromosome
A of strain CBS767 of Debaryomyces hansenii -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 405
Score = 37.1 bits (82), Expect = 0.35
Identities = 14/55 (25%), Positives = 31/55 (56%)
Frame = -1
Query: 590 IAFRLALSGVLAPDVYDLGELLAHPILHSLRGTPNEWACELVKAVSVGDVGAFER 426
+ + L ++ +L +Y+ GELL H IL+ + + +W L+ ++ G++ F +
Sbjct: 222 LCYDLCIAALLGDKIYNFGELLLHDILNCFKDSQYDWLYNLIHNLNSGNLKNFNK 276
>UniRef50_UPI0001554CB0 Cluster: PREDICTED: similar to LOC616722
protein; n=1; Ornithorhynchus anatinus|Rep: PREDICTED:
similar to LOC616722 protein - Ornithorhynchus anatinus
Length = 452
Score = 36.3 bits (80), Expect = 0.61
Identities = 21/62 (33%), Positives = 36/62 (58%)
Frame = -3
Query: 369 EIAILCLMEMAFNKSSSQRKLSXEEIAREARIPLDEVELLIMKALAEKLIRGHIDQVRSC 190
E+AIL + +S + + EE+ARE +P +EV+ LI LA+ + RG + Q+ +
Sbjct: 290 EVAILTDSLSDYCRSFGLERETLEELARELGLPQEEVQGLIRSPLAQDITRGLVLQLLAS 349
Query: 189 AN 184
A+
Sbjct: 350 AS 351
>UniRef50_Q4QDA3 Cluster: Proteasome regulatory non-ATP-ase subunit,
putative; n=3; Leishmania|Rep: Proteasome regulatory
non-ATP-ase subunit, putative - Leishmania major
Length = 412
Score = 35.5 bits (78), Expect = 1.1
Identities = 20/80 (25%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = -3
Query: 432 REDPGQIQLRRITQSRQAT-ETEIAILCLMEMAFNKSSSQRKLSXEEIAREARIPLDEVE 256
R+ QI S AT ++ ++ L+ + F S+R + +A+ +P E
Sbjct: 285 RQHQQQISQEPQLVSASATLHRKVRLMALLHLIFYTPLSERTFTFHAVAQRCGVPDSGAE 344
Query: 255 LLIMKALAEKLIRGHIDQVR 196
L+++ALA +I+G +D ++
Sbjct: 345 PLLLEALAHGIIKGRMDGLK 364
Score = 33.5 bits (73), Expect = 4.3
Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Frame = -1
Query: 590 IAFRLALSGVLAPDVYDLGELLAHPILHSL---RGTPNEWACELVKAVSVGDVGAFE 429
+A++ ++G+L+ +++ G+LL S P WA E+++ + GDV FE
Sbjct: 225 LAYKTVVAGLLSDKIFNFGKLLNFDQFVSRLQREACPQRWALEMMRLCNEGDVANFE 281
>UniRef50_A5VCI2 Cluster: Putative uncharacterized protein; n=1;
Sphingomonas wittichii RW1|Rep: Putative uncharacterized
protein - Sphingomonas wittichii RW1
Length = 136
Score = 35.1 bits (77), Expect = 1.4
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = -2
Query: 187 ERCNGCGRVRWPGRAPC*R 131
+RC+GCG +RWP RA C R
Sbjct: 28 QRCSGCGTLRWPARAICNR 46
>UniRef50_A6WEW9 Cluster: Carbohydrate kinase FGGY; n=2;
Frankineae|Rep: Carbohydrate kinase FGGY - Kineococcus
radiotolerans SRS30216
Length = 524
Score = 34.7 bits (76), Expect = 1.9
Identities = 20/53 (37%), Positives = 26/53 (49%)
Frame = +1
Query: 454 DTALTSSQAHSLGVPLRECRIG*ANNSPKSYTSGASTPERASLKAISARXVAG 612
DTA T++ HS+G PL E G A P RA ++A+ A VAG
Sbjct: 29 DTAGTATAQHSVGYPLEEPEPGHAVQDPHLILDAVQRSVRAVVEAVGAGRVAG 81
>UniRef50_Q980Y2 Cluster: Primase; n=1; Sulfolobus solfataricus|Rep:
Primase - Sulfolobus solfataricus
Length = 532
Score = 34.7 bits (76), Expect = 1.9
Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Frame = -3
Query: 450 WRRWCLREDPGQIQLRRITQSRQATETEI-AILCLMEMAFNKSSSQRKLSXEEIAREAR- 277
W RW + E P Q + + TE E+ IL + +AF++ K E+ E R
Sbjct: 309 WHRWLIIEFPNQFEDNTAWGDKTFTEDELEGILTVSILAFSRVLLHGKFDFEQTEEEVRG 368
Query: 276 IPLDEVELLIMKALAEKLIRGHI 208
I L ++ + K + EKL G I
Sbjct: 369 IWLSTID-YVYKFVKEKLKHGEI 390
>UniRef50_Q9N4C2 Cluster: Probable cleavage and polyadenylation
specificity factor subunit 1; n=2; Caenorhabditis|Rep:
Probable cleavage and polyadenylation specificity factor
subunit 1 - Caenorhabditis elegans
Length = 1454
Score = 34.3 bits (75), Expect = 2.4
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = -3
Query: 351 LMEMAFNKSSSQRKLSXEEIAREARIPLDEVELL--IMKALAEKLIRGHI 208
L+++ + +RK ++ A+EA +P DE E L MK L E+++ I
Sbjct: 809 LVDLTVEEEEKERKAKAQQAAKEASVPTDEAEQLNTEMKQLCERVLEAQI 858
>UniRef50_UPI000058412F Cluster: PREDICTED: similar to Peroxisome
proliferator-activated receptor-binding protein (PBP)
(PPAR-binding protein) (Thyroid hormone
receptor-associated protein complex 220 kDa component)
(Trap220) (Thyroid receptor-interacting protein 2)
(TRIP-2) (p53 regulatory p...; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to Peroxisome
proliferator-activated receptor-binding protein (PBP)
(PPAR-binding protein) (Thyroid hormone
receptor-associated protein complex 220 kDa component)
(Trap220) (Thyroid receptor-interacting protein 2)
(TRIP-2) (p53 regulatory p... - Strongylocentrotus
purpuratus
Length = 2421
Score = 33.9 bits (74), Expect = 3.2
Identities = 24/65 (36%), Positives = 34/65 (52%)
Frame = +1
Query: 415 LARILSKAPTSPTDTALTSSQAHSLGVPLRECRIG*ANNSPKSYTSGASTPERASLKAIS 594
LA I SKA T+P + S A S VP+ I ++ P + TS + T +S KAIS
Sbjct: 1498 LAGITSKAQTTPISLSAPSKLASSQAVPV-SSSIKTSSVVPSTTTSSSGTSSGSSTKAIS 1556
Query: 595 ARXVA 609
+ V+
Sbjct: 1557 SSPVS 1561
>UniRef50_Q7JVI3 Cluster: LD23767p; n=8; Endopterygota|Rep: LD23767p
- Drosophila melanogaster (Fruit fly)
Length = 387
Score = 33.5 bits (73), Expect = 4.3
Identities = 17/56 (30%), Positives = 33/56 (58%)
Frame = -3
Query: 369 EIAILCLMEMAFNKSSSQRKLSXEEIAREARIPLDEVELLIMKALAEKLIRGHIDQ 202
++ +L M++A S +++ E + +E +I DEVE +++ L KL+R +DQ
Sbjct: 277 KMRLLTFMQLA----ESSPEMTFETLTKELQINEDEVEPFVIEVLKTKLVRARLDQ 328
>UniRef50_Q5A7S6 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 147
Score = 32.7 bits (71), Expect = 7.5
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = -2
Query: 463 KLYRLETLVPSRGSGPNPTATNYTKQTGN*DRNCDSVLNG 344
K+ LE P RGS NP+ TN T N + N + NG
Sbjct: 35 KITALEAYTPERGSKGNPSGTNNNNNTNNTNTNTTNNNNG 74
>UniRef50_O95817 Cluster: BAG family molecular chaperone regulator
3; n=21; Amniota|Rep: BAG family molecular chaperone
regulator 3 - Homo sapiens (Human)
Length = 575
Score = 32.7 bits (71), Expect = 7.5
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Frame = +2
Query: 422 GSSRRHQRLQPIQ----L*PVHRPIHWACPSENVGLGEPTIHPNHIHPEPALQR 571
G SR RL P + + P RP + P + G +HP H++P+P +QR
Sbjct: 68 GPSREGSRLPPAREGHPVYPQLRPGYIPIPVLHEGAENRQVHPFHVYPQPGMQR 121
>UniRef50_Q7ZYW6 Cluster: Origin recognition complex, subunit
1-like; n=2; Danio rerio|Rep: Origin recognition
complex, subunit 1-like - Danio rerio (Zebrafish)
(Brachydanio rerio)
Length = 910
Score = 32.3 bits (70), Expect = 9.9
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Frame = +1
Query: 430 SKAPTSPTDTALTSSQAHS--LGVP-LRECRIG*ANNSPKSYTSGASTPERASLKAISAR 600
S +P PT TA S A S LGVP L + NN+ ++ +TP RAS++ + AR
Sbjct: 317 SHSPDKPTLTAYGSDSATSVFLGVPALGDDDSESLNNTGRTPRKREATPRRASVRGLKAR 376
Query: 601 XVAGR 615
+ R
Sbjct: 377 TPSRR 381
>UniRef50_Q1DVN0 Cluster: Putative uncharacterized protein; n=1;
Coccidioides immitis|Rep: Putative uncharacterized
protein - Coccidioides immitis
Length = 1147
Score = 32.3 bits (70), Expect = 9.9
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +3
Query: 120 HPXXRQHGARPGXRTRPHPLHRSRTXAPDLY 212
HP +QH + P + PHP +S+T PDLY
Sbjct: 48 HPVFQQHDSHPHPHSHPHPHPQSQT--PDLY 76
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 579,044,615
Number of Sequences: 1657284
Number of extensions: 11588727
Number of successful extensions: 29982
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 28895
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29962
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46466611856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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