Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_F02
         (432 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051512-1|AAK92936.1|  525|Drosophila melanogaster GH16485p pro...    69   2e-12
AE014296-149|AAF47424.1|  525|Drosophila melanogaster CG12191-PA...    69   2e-12
AY051543-1|AAK92967.1|  340|Drosophila melanogaster GH19181p pro...    51   8e-07
AE014298-1082|AAF46290.2|  340|Drosophila melanogaster CG10946-P...    51   8e-07
AY060637-1|AAL28185.1|  344|Drosophila melanogaster GH05565p pro...    46   2e-05
AY060281-1|AAL25320.1|  244|Drosophila melanogaster GH12331p pro...    46   2e-05
AE014298-2034|AAF48372.2|  344|Drosophila melanogaster CG32600-P...    46   2e-05
AY069421-1|AAL39566.1|  283|Drosophila melanogaster LD13525p pro...    40   0.001
AE014296-1790|AAF50177.2|  283|Drosophila melanogaster CG14162-P...    40   0.001
AE013599-2142|AAM70937.1| 4463|Drosophila melanogaster CG18255-P...    30   1.5  
AE013599-2141|AAM70936.1| 9270|Drosophila melanogaster CG18255-P...    30   1.5  
M23412-1|AAA28676.1|  788|Drosophila melanogaster protein ( Dros...    29   3.5  
AE013599-3856|AAM68310.1|  805|Drosophila melanogaster CG4356-PB...    29   3.5  
AE013599-3855|AAF47197.1|  788|Drosophila melanogaster CG4356-PA...    29   3.5  
AY069266-1|AAL39411.1|  384|Drosophila melanogaster GM08106p pro...    28   6.2  
AY084163-1|AAL89901.1|  378|Drosophila melanogaster RE37683p pro...    27   8.2  
AE013599-2603|AAF57761.2|  485|Drosophila melanogaster CG5765-PA...    27   8.2  

>AY051512-1|AAK92936.1|  525|Drosophila melanogaster GH16485p
           protein.
          Length = 525

 Score = 69.3 bits (162), Expect = 2e-12
 Identities = 38/119 (31%), Positives = 57/119 (47%)
 Frame = -1

Query: 432 VTIVDGAGAAVSEQVCEVSSTVALRCEVKGLKMEGGPSLLWYRKDDLLNDDTTRGGISVR 253
           V IVD  G  + E+  E+ ST+ L C V+ + M     + W   D++LN D TRGG+SV+
Sbjct: 383 VMIVDEVGDPLQEKYYEIDSTLQLSCVVRNVAMTSSV-VFWKHMDNILNYDVTRGGVSVK 441

Query: 252 TEFGANXXXXXXXXXXXXXXXXXRYTCTVXXXXXXXXXXAHVILHVIKGESLAELHQSG 76
           TE   +                  YTC++            +++H++ GES AELH  G
Sbjct: 442 TELMEDGANSTLSIAKISKTDSGNYTCSISEFQNFT-----IVVHILNGESFAELHHGG 495


>AE014296-149|AAF47424.1|  525|Drosophila melanogaster CG12191-PA
           protein.
          Length = 525

 Score = 69.3 bits (162), Expect = 2e-12
 Identities = 38/119 (31%), Positives = 57/119 (47%)
 Frame = -1

Query: 432 VTIVDGAGAAVSEQVCEVSSTVALRCEVKGLKMEGGPSLLWYRKDDLLNDDTTRGGISVR 253
           V IVD  G  + E+  E+ ST+ L C V+ + M     + W   D++LN D TRGG+SV+
Sbjct: 383 VMIVDEVGDPLQEKYYEIDSTLQLSCVVRNVAMTSSV-VFWKHMDNILNYDVTRGGVSVK 441

Query: 252 TEFGANXXXXXXXXXXXXXXXXXRYTCTVXXXXXXXXXXAHVILHVIKGESLAELHQSG 76
           TE   +                  YTC++            +++H++ GES AELH  G
Sbjct: 442 TELMEDGANSTLSIAKISKTDSGNYTCSISEFQNFT-----IVVHILNGESFAELHHGG 495


>AY051543-1|AAK92967.1|  340|Drosophila melanogaster GH19181p
           protein.
          Length = 340

 Score = 50.8 bits (116), Expect = 8e-07
 Identities = 38/139 (27%), Positives = 58/139 (41%)
 Frame = -1

Query: 432 VTIVDGAGAAVSEQVCEVSSTVALRCEVKGLKMEGGPSLLWYRKDDLLNDDTTRGGISVR 253
           V I+D  G+A  E+  +  ST+ L+C +  +       + W     LLN DT+RGGISV+
Sbjct: 180 VEILDERGSATPEKYYKAGSTIELQCVISKIPHPSS-YITWRHGPRLLNYDTSRGGISVK 238

Query: 252 TEFGANXXXXXXXXXXXXXXXXXRYTCTVXXXXXXXXXXAHVILHVIKGESLAELHQSGN 73
           T+                      YTC +            V++HV+ GE  A +  +  
Sbjct: 239 TDMLPGRALSRLYIANANRQDTGNYTCMLGNEITET-----VVVHVLNGEEPAAMQHANG 293

Query: 72  SCAASKLIITTLCVLLEYY 16
           S    K   +T+ VL   Y
Sbjct: 294 S--RQKANASTMVVLFLVY 310


>AE014298-1082|AAF46290.2|  340|Drosophila melanogaster CG10946-PA
           protein.
          Length = 340

 Score = 50.8 bits (116), Expect = 8e-07
 Identities = 38/139 (27%), Positives = 58/139 (41%)
 Frame = -1

Query: 432 VTIVDGAGAAVSEQVCEVSSTVALRCEVKGLKMEGGPSLLWYRKDDLLNDDTTRGGISVR 253
           V I+D  G+A  E+  +  ST+ L+C +  +       + W     LLN DT+RGGISV+
Sbjct: 180 VEILDERGSATPEKYYKAGSTIELQCVISKIPHPSS-YITWRHGPRLLNYDTSRGGISVK 238

Query: 252 TEFGANXXXXXXXXXXXXXXXXXRYTCTVXXXXXXXXXXAHVILHVIKGESLAELHQSGN 73
           T+                      YTC +            V++HV+ GE  A +  +  
Sbjct: 239 TDMLPGRALSRLYIANANRQDTGNYTCMLGNEITET-----VVVHVLNGEEPAAMQHANG 293

Query: 72  SCAASKLIITTLCVLLEYY 16
           S    K   +T+ VL   Y
Sbjct: 294 S--RQKANASTMVVLFLVY 310


>AY060637-1|AAL28185.1|  344|Drosophila melanogaster GH05565p
           protein.
          Length = 344

 Score = 46.0 bits (104), Expect = 2e-05
 Identities = 35/118 (29%), Positives = 53/118 (44%), Gaps = 2/118 (1%)
 Frame = -1

Query: 375 STVALRCEVKGLKMEGGPSLLWYRKDDLLNDDTTRGGISVRTEFGANXXXXXXXXXXXXX 196
           ST+ L C VK    E  P+++W    +++N D+ RGGIS+ TE G               
Sbjct: 161 STINLTCIVK-FAPEPPPTVIWSHNREIINFDSPRGGISLVTEKGV-LTTSRLLVQKAIT 218

Query: 195 XXXXRYTCTVXXXXXXXXXXAHVILHVIKGESLAELH--QSGNSCAASKLIITTLCVL 28
                YTCT             V +H++ GE  A +H   +GNS A+   ++  L +L
Sbjct: 219 QDSGLYTCT-----PSNANPTSVRVHIVDGEHPAAMHTGNNGNSTASQPPVLLPLVLL 271


>AY060281-1|AAL25320.1|  244|Drosophila melanogaster GH12331p
           protein.
          Length = 244

 Score = 46.0 bits (104), Expect = 2e-05
 Identities = 35/118 (29%), Positives = 53/118 (44%), Gaps = 2/118 (1%)
 Frame = -1

Query: 375 STVALRCEVKGLKMEGGPSLLWYRKDDLLNDDTTRGGISVRTEFGANXXXXXXXXXXXXX 196
           ST+ L C VK    E  P+++W    +++N D+ RGGIS+ TE G               
Sbjct: 61  STINLTCIVK-FAPEPPPTVIWSHNREIINFDSPRGGISLVTEKGV-LTTSRLLVQKAIT 118

Query: 195 XXXXRYTCTVXXXXXXXXXXAHVILHVIKGESLAELH--QSGNSCAASKLIITTLCVL 28
                YTCT             V +H++ GE  A +H   +GNS A+   ++  L +L
Sbjct: 119 QDSGLYTCT-----PSNANPTSVRVHIVDGEHPAAMHTGNNGNSTASQPPVLLPLVLL 171


>AE014298-2034|AAF48372.2|  344|Drosophila melanogaster CG32600-PA
           protein.
          Length = 344

 Score = 46.0 bits (104), Expect = 2e-05
 Identities = 35/118 (29%), Positives = 53/118 (44%), Gaps = 2/118 (1%)
 Frame = -1

Query: 375 STVALRCEVKGLKMEGGPSLLWYRKDDLLNDDTTRGGISVRTEFGANXXXXXXXXXXXXX 196
           ST+ L C VK    E  P+++W    +++N D+ RGGIS+ TE G               
Sbjct: 161 STINLTCIVK-FAPEPPPTVIWSHNREIINFDSPRGGISLVTEKGV-LTTSRLLVQKAIT 218

Query: 195 XXXXRYTCTVXXXXXXXXXXAHVILHVIKGESLAELH--QSGNSCAASKLIITTLCVL 28
                YTCT             V +H++ GE  A +H   +GNS A+   ++  L +L
Sbjct: 219 QDSGLYTCT-----PSNANPTSVRVHIVDGEHPAAMHTGNNGNSTASQPPVLLPLVLL 271


>AY069421-1|AAL39566.1|  283|Drosophila melanogaster LD13525p
           protein.
          Length = 283

 Score = 40.3 bits (90), Expect = 0.001
 Identities = 19/45 (42%), Positives = 28/45 (62%)
 Frame = -1

Query: 375 STVALRCEVKGLKMEGGPSLLWYRKDDLLNDDTTRGGISVRTEFG 241
           ST+ L C VK    E    + WY  ++++N D++RGG+SV TE G
Sbjct: 192 STINLTCTVK-FSPEPPAYIFWYHHEEVINYDSSRGGVSVITEKG 235


>AE014296-1790|AAF50177.2|  283|Drosophila melanogaster CG14162-PA
           protein.
          Length = 283

 Score = 40.3 bits (90), Expect = 0.001
 Identities = 19/45 (42%), Positives = 28/45 (62%)
 Frame = -1

Query: 375 STVALRCEVKGLKMEGGPSLLWYRKDDLLNDDTTRGGISVRTEFG 241
           ST+ L C VK    E    + WY  ++++N D++RGG+SV TE G
Sbjct: 192 STINLTCTVK-FSPEPPAYIFWYHHEEVINYDSSRGGVSVITEKG 235


>AE013599-2142|AAM70937.1| 4463|Drosophila melanogaster CG18255-PC,
            isoform C protein.
          Length = 4463

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 12/35 (34%), Positives = 22/35 (62%)
 Frame = -1

Query: 384  EVSSTVALRCEVKGLKMEGGPSLLWYRKDDLLNDD 280
            +V+  V L C++ G  +   P +LWY+ D+L++ D
Sbjct: 2662 QVTYPVRLTCQIVGYPV---PEILWYKDDELIHTD 2693


>AE013599-2141|AAM70936.1| 9270|Drosophila melanogaster CG18255-PA,
            isoform A protein.
          Length = 9270

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 12/35 (34%), Positives = 22/35 (62%)
 Frame = -1

Query: 384  EVSSTVALRCEVKGLKMEGGPSLLWYRKDDLLNDD 280
            +V+  V L C++ G  +   P +LWY+ D+L++ D
Sbjct: 7469 QVTYPVRLTCQIVGYPV---PEILWYKDDELIHTD 7500


>M23412-1|AAA28676.1|  788|Drosophila melanogaster protein (
           Drosophila muscarinicacetylcholine receptor mRNA,
           complete cds. ).
          Length = 788

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 4/35 (11%)
 Frame = +2

Query: 323 GPPSIFKPL----TSQRKATVLLTSQTCSDTAAPA 415
           GPPSI +PL    T+    T   T+ T + TA+PA
Sbjct: 13  GPPSILEPLFRTVTTSTTTTTTTTTSTTTTTASPA 47


>AE013599-3856|AAM68310.1|  805|Drosophila melanogaster CG4356-PB,
           isoform B protein.
          Length = 805

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 4/35 (11%)
 Frame = +2

Query: 323 GPPSIFKPL----TSQRKATVLLTSQTCSDTAAPA 415
           GPPSI +PL    T+    T   T+ T + TA+PA
Sbjct: 13  GPPSILEPLFKTVTTSTTTTTTTTTSTTTTTASPA 47


>AE013599-3855|AAF47197.1|  788|Drosophila melanogaster CG4356-PA,
           isoform A protein.
          Length = 788

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 4/35 (11%)
 Frame = +2

Query: 323 GPPSIFKPL----TSQRKATVLLTSQTCSDTAAPA 415
           GPPSI +PL    T+    T   T+ T + TA+PA
Sbjct: 13  GPPSILEPLFKTVTTSTTTTTTTTTSTTTTTASPA 47


>AY069266-1|AAL39411.1|  384|Drosophila melanogaster GM08106p
           protein.
          Length = 384

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 6/40 (15%)
 Frame = +2

Query: 326 PPSIFKPLTSQRKATVLLTSQTCSD------TAAPAPSTI 427
           PP +  PLT+Q+ A ++ TS T S       TAAP  +T+
Sbjct: 282 PPLLPDPLTTQQSAELIATSTTTSSNGTTSTTAAPLAATV 321


>AY084163-1|AAL89901.1|  378|Drosophila melanogaster RE37683p
           protein.
          Length = 378

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 20/66 (30%), Positives = 28/66 (42%)
 Frame = +2

Query: 233 PFAPNSVRTLMPPLVVSSFNKSSFRYHSNEGPPSIFKPLTSQRKATVLLTSQTCSDTAAP 412
           P AP++  T +P   V+     +    + E P S      S  +A V  T    S T AP
Sbjct: 230 PVAPSTTETPVPTTPVAPSTTEAPVSTTPEAPVSTTPVAPSTTEAPVPTTPVAPSTTEAP 289

Query: 413 APSTIV 430
            P+T V
Sbjct: 290 VPTTPV 295


>AE013599-2603|AAF57761.2|  485|Drosophila melanogaster CG5765-PA
           protein.
          Length = 485

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 20/66 (30%), Positives = 28/66 (42%)
 Frame = +2

Query: 233 PFAPNSVRTLMPPLVVSSFNKSSFRYHSNEGPPSIFKPLTSQRKATVLLTSQTCSDTAAP 412
           P AP++  T +P   V+     +    + E P S      S  +A V  T    S T AP
Sbjct: 230 PVAPSTTETPVPTTPVAPSTTEAPVSTTPEAPVSTTPVAPSTTEAPVPTTPVAPSTTEAP 289

Query: 413 APSTIV 430
            P+T V
Sbjct: 290 VPTTPV 295


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,851,016
Number of Sequences: 53049
Number of extensions: 401277
Number of successful extensions: 1247
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1218
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1241
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1355285490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)