Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_F02
         (432 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z37983-5|CAA86059.2|  405|Caenorhabditis elegans Hypothetical pr...    28   2.5  
U88310-3|AAB42337.1|  608|Caenorhabditis elegans Hypothetical pr...    27   4.4  
U23513-6|AAB36864.1| 1168|Caenorhabditis elegans Hypothetical pr...    27   5.8  
U23181-3|AAR12989.1|   80|Caenorhabditis elegans Insulin related...    27   5.8  
Z81514-6|CAB62802.1|  712|Caenorhabditis elegans Hypothetical pr...    27   7.7  

>Z37983-5|CAA86059.2|  405|Caenorhabditis elegans Hypothetical
           protein B0393.6 protein.
          Length = 405

 Score = 28.3 bits (60), Expect = 2.5
 Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
 Frame = +2

Query: 239 APNSVRTLMPPLVVSSFNKSSFRYHSNEGPPSIFKPLTSQRKATVLLT-----SQTCSDT 403
           +P+S+ T + P +  S ++SSF  HSN+    +  P TS    T  L+     S++ +  
Sbjct: 270 SPHSLPTNVAPRIPPS-SRSSFTQHSNDSGVVLSTPPTSSSAKTAGLSPTHNFSRSSTSL 328

Query: 404 AAPAPST 424
             P P+T
Sbjct: 329 RIPTPTT 335


>U88310-3|AAB42337.1|  608|Caenorhabditis elegans Hypothetical
           protein C24G7.1 protein.
          Length = 608

 Score = 27.5 bits (58), Expect = 4.4
 Identities = 16/61 (26%), Positives = 27/61 (44%)
 Frame = -2

Query: 239 QTVLVPCSAWPACELTTLVGTRVQWPGRRHQHHYRHMSYCMSLKVRVLQSCIKVETRVPH 60
           +TV V       CE TT+ G +  + G+R    +  +  C S+ + + Q CI     +  
Sbjct: 57  ETVSVERETQHFCETTTMHGPKRIFQGKRWATLFWLIMVCTSIGLLITQVCILASNYLSK 116

Query: 59  P 57
           P
Sbjct: 117 P 117


>U23513-6|AAB36864.1| 1168|Caenorhabditis elegans Hypothetical
           protein D2021.1 protein.
          Length = 1168

 Score = 27.1 bits (57), Expect = 5.8
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +1

Query: 160 PGHCTRVPTSVVSSHAGHAEHGTSTV 237
           P  C  +  S + SH GH  HG +TV
Sbjct: 875 PAFCRLIAGSNMLSHLGHQVHGMNTV 900


>U23181-3|AAR12989.1|   80|Caenorhabditis elegans Insulin related
           protein 20 protein.
          Length = 80

 Score = 27.1 bits (57), Expect = 5.8
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -2

Query: 158 RRHQHHYRHMSYCMSLKVRVLQ 93
           + H HH+RH  YC    V+ L+
Sbjct: 24  KHHHHHHRHKGYCGVKAVKKLK 45


>Z81514-6|CAB62802.1|  712|Caenorhabditis elegans Hypothetical
           protein F26F2.7 protein.
          Length = 712

 Score = 26.6 bits (56), Expect = 7.7
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
 Frame = +2

Query: 320 EGPPSIFKP--LTSQRKATVLLTSQTCSDTAAPAPS 421
           E  P+I KP  ++   + TV+  SQT S    P+PS
Sbjct: 91  ESTPAIRKPSRISYDERLTVICDSQTSSPLQTPSPS 126


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,830,628
Number of Sequences: 27780
Number of extensions: 187744
Number of successful extensions: 455
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 445
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 455
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 724655464
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)