Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_E23
         (389 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0284 + 2117288-2117509                                           70   8e-13
02_05_0025 - 25165438-25165708,25165807-25166048,25166191-251662...    69   1e-12
11_01_0276 + 2057486-2057707                                           69   2e-12
05_04_0267 - 19570478-19571122                                         27   4.0  

>12_01_0284 + 2117288-2117509
          Length = 73

 Score = 69.7 bits (163), Expect = 8e-13
 Identities = 37/73 (50%), Positives = 47/73 (64%)
 Frame = -2

Query: 226 MLEVTCNDRLGKKVRVKCNPDDXRG*FKEVNSRTNWH*IRQNSTQEMVHSIXRIILNLRD 47
           M+EV  NDRLGKKVRVKCN DD  G  K++ +        +   Q+  ++I +  + LRD
Sbjct: 1   MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRPEKIRIQKW-YNIYKDHITLRD 59

Query: 46  YEIHDGMNLELYY 8
           YEIHDGM LELYY
Sbjct: 60  YEIHDGMGLELYY 72



 Score = 46.0 bits (104), Expect = 1e-05
 Identities = 18/27 (66%), Positives = 24/27 (88%)
 Frame = -3

Query: 156 VGDLKKLIAAQTGTRYDKIVLKKWYTV 76
           +GDLKKL+AAQTGTR +KI ++KWY +
Sbjct: 24  IGDLKKLVAAQTGTRPEKIRIQKWYNI 50


>02_05_0025 -
           25165438-25165708,25165807-25166048,25166191-25166222,
           25167174-25167231,25167331-25167438
          Length = 236

 Score = 68.9 bits (161), Expect = 1e-12
 Identities = 36/75 (48%), Positives = 48/75 (64%)
 Frame = -2

Query: 232 SKMLEVTCNDRLGKKVRVKCNPDDXRG*FKEVNSRTNWH*IRQNSTQEMVHSIXRIILNL 53
           ++M+EV  NDRLGKKVRVKCN DD  G  K++ +        +   Q+  ++I +  + L
Sbjct: 162 AEMIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKW-YNIYKDHITL 220

Query: 52  RDYEIHDGMNLELYY 8
            DYEIHDGM LELYY
Sbjct: 221 ADYEIHDGMGLELYY 235



 Score = 46.4 bits (105), Expect = 8e-06
 Identities = 18/27 (66%), Positives = 24/27 (88%)
 Frame = -3

Query: 156 VGDLKKLIAAQTGTRYDKIVLKKWYTV 76
           +GDLKKL+AAQTGTR +KI ++KWY +
Sbjct: 187 IGDLKKLVAAQTGTRAEKIRIQKWYNI 213


>11_01_0276 + 2057486-2057707
          Length = 73

 Score = 68.5 bits (160), Expect = 2e-12
 Identities = 36/73 (49%), Positives = 47/73 (64%)
 Frame = -2

Query: 226 MLEVTCNDRLGKKVRVKCNPDDXRG*FKEVNSRTNWH*IRQNSTQEMVHSIXRIILNLRD 47
           M+EV  NDRLGKKVRVKCN DD  G  K++ +        +   Q+  ++I +  + L+D
Sbjct: 1   MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRPEKIRIQKW-YNIYKDHITLKD 59

Query: 46  YEIHDGMNLELYY 8
           YEIHDGM LELYY
Sbjct: 60  YEIHDGMGLELYY 72



 Score = 46.0 bits (104), Expect = 1e-05
 Identities = 18/27 (66%), Positives = 24/27 (88%)
 Frame = -3

Query: 156 VGDLKKLIAAQTGTRYDKIVLKKWYTV 76
           +GDLKKL+AAQTGTR +KI ++KWY +
Sbjct: 24  IGDLKKLVAAQTGTRPEKIRIQKWYNI 50


>05_04_0267 - 19570478-19571122
          Length = 214

 Score = 27.5 bits (58), Expect = 4.0
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = +3

Query: 138 TSLNHPRXSSGLHLTRTFLPSRSLHVTSSILLSNQLSVLLR 260
           T  +HPR     + +    P R+  VTSS+L+ N+  V  R
Sbjct: 77  TEKDHPRSLMHRNFSEATPPRRTRRVTSSLLVRNRNKVFTR 117


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,023,505
Number of Sequences: 37544
Number of extensions: 117598
Number of successful extensions: 234
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 226
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 231
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 660830060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)