Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_E23
         (389 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023690-1|AAY85090.1|   73|Drosophila melanogaster IP03783p pro...    81   7e-16
AE013599-231|AAF57398.1|   73|Drosophila melanogaster CG3450-PA ...    81   7e-16
AE014298-3105|AAF50838.2| 1570|Drosophila melanogaster CG1494-PA...    27   8.7  

>BT023690-1|AAY85090.1|   73|Drosophila melanogaster IP03783p
           protein.
          Length = 73

 Score = 80.6 bits (190), Expect = 7e-16
 Identities = 40/75 (53%), Positives = 52/75 (69%), Gaps = 1/75 (1%)
 Frame = -2

Query: 226 MLEVTCNDRLGKKVRVKCNPDDXRG*FKE-VNSRTNWH*IRQNSTQEMVHSIXRIILNLR 50
           M+E+TCNDRLGKKVRVKCNPDD  G  K+ + ++T      +    +  ++I +  + L 
Sbjct: 1   MIEITCNDRLGKKVRVKCNPDDTIGDLKKLIAAQTGTK--HEKIVLKKWYTIFKDPIRLS 58

Query: 49  DYEIHDGMNLELYYQ 5
           DYEIHDGMNLELYYQ
Sbjct: 59  DYEIHDGMNLELYYQ 73



 Score = 54.4 bits (125), Expect = 5e-08
 Identities = 22/27 (81%), Positives = 27/27 (100%)
 Frame = -3

Query: 156 VGDLKKLIAAQTGTRYDKIVLKKWYTV 76
           +GDLKKLIAAQTGT+++KIVLKKWYT+
Sbjct: 24  IGDLKKLIAAQTGTKHEKIVLKKWYTI 50


>AE013599-231|AAF57398.1|   73|Drosophila melanogaster CG3450-PA
           protein.
          Length = 73

 Score = 80.6 bits (190), Expect = 7e-16
 Identities = 40/75 (53%), Positives = 52/75 (69%), Gaps = 1/75 (1%)
 Frame = -2

Query: 226 MLEVTCNDRLGKKVRVKCNPDDXRG*FKE-VNSRTNWH*IRQNSTQEMVHSIXRIILNLR 50
           M+E+TCNDRLGKKVRVKCNPDD  G  K+ + ++T      +    +  ++I +  + L 
Sbjct: 1   MIEITCNDRLGKKVRVKCNPDDTIGDLKKLIAAQTGTK--HEKIVLKKWYTIFKDPIRLS 58

Query: 49  DYEIHDGMNLELYYQ 5
           DYEIHDGMNLELYYQ
Sbjct: 59  DYEIHDGMNLELYYQ 73



 Score = 54.4 bits (125), Expect = 5e-08
 Identities = 22/27 (81%), Positives = 27/27 (100%)
 Frame = -3

Query: 156 VGDLKKLIAAQTGTRYDKIVLKKWYTV 76
           +GDLKKLIAAQTGT+++KIVLKKWYT+
Sbjct: 24  IGDLKKLIAAQTGTKHEKIVLKKWYTI 50


>AE014298-3105|AAF50838.2| 1570|Drosophila melanogaster CG1494-PA
           protein.
          Length = 1570

 Score = 27.1 bits (57), Expect = 8.7
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +1

Query: 259 EIKYINSNFLFVLVILPPFKIFTAVLMVFITFFSLNHR 372
           +++  N   L V++++PP     AVLM F  F  +NHR
Sbjct: 19  KLQLANPLELLVILLVPPLFTLVAVLMRF--FIPVNHR 54


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,821,126
Number of Sequences: 53049
Number of extensions: 211448
Number of successful extensions: 426
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 415
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 423
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1086986940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)