Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_pT_E20
(800 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00048-13|AAB53830.1| 484|Caenorhabditis elegans Maternal effec... 232 3e-61
U00048-12|AAL27228.1| 507|Caenorhabditis elegans Maternal effec... 232 3e-61
Z99281-41|CAB16523.1| 444|Caenorhabditis elegans Hypothetical p... 33 0.31
Z70756-10|CAI46587.1| 228|Caenorhabditis elegans Hypothetical p... 31 0.96
U20864-12|AAK68358.2| 257|Caenorhabditis elegans Hypothetical p... 31 0.96
Z81493-5|CAB04042.1| 419|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z68336-3|CAA92735.1| 710|Caenorhabditis elegans Hypothetical pr... 29 3.9
U80030-13|AAG24169.1| 831|Caenorhabditis elegans Hypothetical p... 29 3.9
Z81050-7|CAB02853.1| 154|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z71178-2|CAA94875.1| 297|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z71178-1|CAA94874.1| 297|Caenorhabditis elegans Hypothetical pr... 28 6.8
U53151-5|AAB37068.1| 476|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z98877-14|CAD56615.1| 338|Caenorhabditis elegans Hypothetical p... 28 8.9
AF106579-6|ABS19465.1| 406|Caenorhabditis elegans Hypothetical ... 28 8.9
>U00048-13|AAB53830.1| 484|Caenorhabditis elegans Maternal effect
lethal protein32, isoform a protein.
Length = 484
Score = 232 bits (567), Expect = 3e-61
Identities = 111/216 (51%), Positives = 141/216 (65%)
Frame = -1
Query: 800 VIFFRXGVRSVQANGQKVMYDLESKINQAVFPGLQGGPHNHXXXXXXXXXXXXXXTEFVE 621
+IF+R GVRS A G +YDLE KIN AVFPGLQGGPHNH +FV+
Sbjct: 269 LIFYRKGVRSTNAKGVDTLYDLEEKINSAVFPGLQGGPHNHTIAGIAVALRQCLSEDFVQ 328
Query: 620 YQKQVIKNAQRLCEGLISRGYSIATGGTDVHLALVDLRGVGLRGAPAERVLELCSVACNK 441
Y +QV+KNA+ L E + GY++ATGGTD HL LVDLR +G+ GA AE VL+L +ACNK
Sbjct: 329 YGEQVLKNAKTLAERMKKHGYALATGGTDNHLLLVDLRPIGVEGARAEHVLDLAHIACNK 388
Query: 440 NTVPGDISALNPSGIRLGTPALTTRGLKEADIDKVVDFIDRALKIGLEIIKVSGLKLVDF 261
NT PGD+SAL P GIRLGTPALT+RG +E D +KV DFI ++I + +G L DF
Sbjct: 389 NTCPGDVSALRPGGIRLGTPALTSRGFQEQDFEKVGDFIHEGVQIAKKYNAEAGKTLKDF 448
Query: 260 NKAIEENAEFKKKIENLKEEVENYSKSFPLPGFDKY 153
E N FKK + +L + VE +S F +PG + +
Sbjct: 449 KSFTETNEPFKKDVADLAKRVEEFSTKFEIPGNETF 484
>U00048-12|AAL27228.1| 507|Caenorhabditis elegans Maternal effect
lethal protein32, isoform b protein.
Length = 507
Score = 232 bits (567), Expect = 3e-61
Identities = 111/216 (51%), Positives = 141/216 (65%)
Frame = -1
Query: 800 VIFFRXGVRSVQANGQKVMYDLESKINQAVFPGLQGGPHNHXXXXXXXXXXXXXXTEFVE 621
+IF+R GVRS A G +YDLE KIN AVFPGLQGGPHNH +FV+
Sbjct: 292 LIFYRKGVRSTNAKGVDTLYDLEEKINSAVFPGLQGGPHNHTIAGIAVALRQCLSEDFVQ 351
Query: 620 YQKQVIKNAQRLCEGLISRGYSIATGGTDVHLALVDLRGVGLRGAPAERVLELCSVACNK 441
Y +QV+KNA+ L E + GY++ATGGTD HL LVDLR +G+ GA AE VL+L +ACNK
Sbjct: 352 YGEQVLKNAKTLAERMKKHGYALATGGTDNHLLLVDLRPIGVEGARAEHVLDLAHIACNK 411
Query: 440 NTVPGDISALNPSGIRLGTPALTTRGLKEADIDKVVDFIDRALKIGLEIIKVSGLKLVDF 261
NT PGD+SAL P GIRLGTPALT+RG +E D +KV DFI ++I + +G L DF
Sbjct: 412 NTCPGDVSALRPGGIRLGTPALTSRGFQEQDFEKVGDFIHEGVQIAKKYNAEAGKTLKDF 471
Query: 260 NKAIEENAEFKKKIENLKEEVENYSKSFPLPGFDKY 153
E N FKK + +L + VE +S F +PG + +
Sbjct: 472 KSFTETNEPFKKDVADLAKRVEEFSTKFEIPGNETF 507
>Z99281-41|CAB16523.1| 444|Caenorhabditis elegans Hypothetical
protein Y57G11C.22a protein.
Length = 444
Score = 32.7 bits (71), Expect = 0.31
Identities = 27/103 (26%), Positives = 51/103 (49%), Gaps = 2/103 (1%)
Frame = -1
Query: 521 LVDLRGVGLRGAPAERVLELCSVACNKNTVPGDISALNPSGIRLGTPALTTRGLKEADID 342
+V + G+ ++G V +L V+ N + I+ L + + T + + +K
Sbjct: 66 IVAINGITVKGERKSAVAQLIQVSLNPVKIT--INKLEEANTKGKTLDILIKKVKH---- 119
Query: 341 KVVDFIDR--ALKIGLEIIKVSGLKLVDFNKAIEENAEFKKKI 219
KVV+F+D+ A +GL ++ L + K +EENAEF + +
Sbjct: 120 KVVEFVDQDSADALGLSRAILTNDPLAEKEKILEENAEFYRHL 162
>Z70756-10|CAI46587.1| 228|Caenorhabditis elegans Hypothetical
protein T06E4.12 protein.
Length = 228
Score = 31.1 bits (67), Expect = 0.96
Identities = 15/61 (24%), Positives = 32/61 (52%)
Frame = +1
Query: 235 SAFSSMALLKSTSFSPETLMISRPIFNALSIKSTTLSISASLRPLVVNAGVPSLMPLGLS 414
SAF+ +L + +F+P ++ RP+ A +I + + + RP++ +P+ P +
Sbjct: 124 SAFAPRPVLAAPAFAPAPILAPRPVLAAPAIPAFAPAPLLAPRPVLAAPAIPAFAPAPII 183
Query: 415 A 417
A
Sbjct: 184 A 184
>U20864-12|AAK68358.2| 257|Caenorhabditis elegans Hypothetical
protein F32A5.8 protein.
Length = 257
Score = 31.1 bits (67), Expect = 0.96
Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Frame = -1
Query: 386 TPALTTRGLKEADID-KVVDFIDRALKIGLEIIKVSGLK---LVDFNKAIEENAEFKKKI 219
T AL T LKE D+ K IG+E + LK +V FN+ I E+ + KK+I
Sbjct: 23 TNALDT--LKEIDLSGKTYAITGTTSGIGIETARALALKGAHVVMFNRNIVESEKLKKRI 80
Query: 218 ENLKEEVE 195
E K +V+
Sbjct: 81 EEEKPDVK 88
>Z81493-5|CAB04042.1| 419|Caenorhabditis elegans Hypothetical
protein F01D5.6 protein.
Length = 419
Score = 30.7 bits (66), Expect = 1.3
Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 1/97 (1%)
Frame = -1
Query: 440 NTVPGDISALNPSGIRLGTPALTTRGLKEADIDKVVD-FIDRALKIGLEIIKVSGLKLVD 264
NT+ I + + + A+ G +AD+ K V ++ A+ I L++I S
Sbjct: 303 NTIHESIDEDDKVWVSILQQAMARCGQNDADLPKHVRAVVEEAMSISLKLISDSR----- 357
Query: 263 FNKAIEENAEFKKKIENLKEEVENYSKSFPLPGFDKY 153
+NK EE + K+ + N ++ + + F P F KY
Sbjct: 358 YNKIEEETEKNKEVLGNRQKAWDGATNDFIRPLFQKY 394
>Z68336-3|CAA92735.1| 710|Caenorhabditis elegans Hypothetical
protein F22B3.4 protein.
Length = 710
Score = 29.1 bits (62), Expect = 3.9
Identities = 26/100 (26%), Positives = 44/100 (44%), Gaps = 3/100 (3%)
Frame = -1
Query: 488 APAERVLELCSVACNKNTVPGDISALNPSGIRLGTP-ALTTRGLKEADID--KVVDFIDR 318
A + L +C V CN + ++AL R G P + + E+D+ K V + R
Sbjct: 609 AMVDEFLSICMVVCNDHVYKKSLNALQQVVARKGAPIIIADSSVPESDLAGMKHVLRVPR 668
Query: 317 ALKIGLEIIKVSGLKLVDFNKAIEENAEFKKKIENLKEEV 198
+ I+ V L+L+ ++ A E N + NL + V
Sbjct: 669 TVDCVQNILTVIPLQLLSYHIA-ELNGANVDRPRNLAKSV 707
>U80030-13|AAG24169.1| 831|Caenorhabditis elegans Hypothetical
protein K12D9.12 protein.
Length = 831
Score = 29.1 bits (62), Expect = 3.9
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 237 SIFFNGFIEVNKFQPG-NLNDF*TYFQCSINKIDNFINIS 353
S+FF FI + K P NLN ++FQC + N+ IS
Sbjct: 10 SLFFLTFILICKTDPRENLNTIVSFFQCEDKCVFNYTEIS 49
>Z81050-7|CAB02853.1| 154|Caenorhabditis elegans Hypothetical
protein C50B6.9 protein.
Length = 154
Score = 28.3 bits (60), Expect = 6.8
Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 3/97 (3%)
Frame = -1
Query: 464 LCSVACNKNTVPGDISALNPSGIRLGTPALTTRGLKE--ADIDKVVDFIDRALKIGLEII 291
L +V C + + DIS +P I + P LT G+++ ++ + R +
Sbjct: 57 LLTVECLEEFLNTDISKTSPKVIDIQCPVLTVHGIEDNIVPVENSKKLMQRMASTYKDFH 116
Query: 290 KVSGLKLVDFNKAIEENAEFKKKIENLKEEV-ENYSK 183
++ G VD N ++E E K++ L + + EN SK
Sbjct: 117 RIPG---VDHNFDLDE--EVLKRLGQLMDVIRENESK 148
>Z71178-2|CAA94875.1| 297|Caenorhabditis elegans Hypothetical
protein B0024.2 protein.
Length = 297
Score = 28.3 bits (60), Expect = 6.8
Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = -3
Query: 783 GREVRPGER-TEGHV-RFGIEDKPGCVPGPAGRTAQPRNSGHSHGH 652
GR +PG++ + G+ R G + G PGP GR QP N G S GH
Sbjct: 223 GRPGQPGKQGSAGNPGRKGERGQDG-QPGPGGRPGQPGNRG-SDGH 266
>Z71178-1|CAA94874.1| 297|Caenorhabditis elegans Hypothetical
protein B0024.1 protein.
Length = 297
Score = 28.3 bits (60), Expect = 6.8
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = -3
Query: 783 GREVRPGER-TEGHVRFGIEDKPGCVPGPAGRTAQPRNSGHSHGH 652
GR +PG + G+ E P GPAGR+ QP N G S GH
Sbjct: 224 GRAGQPGRQGAPGNPGRPGERGPSGPCGPAGRSGQPGNRG-SDGH 267
>U53151-5|AAB37068.1| 476|Caenorhabditis elegans Hypothetical
protein T05B11.4 protein.
Length = 476
Score = 28.3 bits (60), Expect = 6.8
Identities = 11/33 (33%), Positives = 22/33 (66%)
Frame = -1
Query: 251 IEENAEFKKKIENLKEEVENYSKSFPLPGFDKY 153
+E NAE +K+ N+ ++ +KS+ + GFD++
Sbjct: 68 LESNAEKSEKLINVPSTLDLSNKSYFIDGFDRF 100
>Z98877-14|CAD56615.1| 338|Caenorhabditis elegans Hypothetical
protein Y69H2.14 protein.
Length = 338
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -3
Query: 708 PGPAGRTAQPRNSGHSHGHETS 643
PGPAG+ QP GHS T+
Sbjct: 206 PGPAGQPGQPGEPGHSDTSSTA 227
>AF106579-6|ABS19465.1| 406|Caenorhabditis elegans Hypothetical
protein F54E2.4 protein.
Length = 406
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = -1
Query: 617 QKQVIKNAQRLCEGLISRGYSIATGGTDVHLALVDLRGVGLR 492
QKQ+ K +G + ++I+ T+ L+ +D RGVG +
Sbjct: 261 QKQMQKQGYDTDQGSVDMHWTISESETEPELSALDARGVGTK 302
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,733,796
Number of Sequences: 27780
Number of extensions: 276652
Number of successful extensions: 1209
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1040
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1204
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1956310428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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