Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_pT_E19
(750 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66560-1|CAA91449.1| 214|Caenorhabditis elegans Hypothetical pr... 35 0.054
AC024200-13|AAF36004.1| 214|Caenorhabditis elegans Glutathione ... 31 0.66
Z80217-4|CAB02290.1| 213|Caenorhabditis elegans Hypothetical pr... 31 0.87
U53344-4|AAA96225.2| 575|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z99279-2|CAD89758.1| 500|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z99279-1|CAB16496.4| 598|Caenorhabditis elegans Hypothetical pr... 28 8.1
U70857-3|AAN84873.1| 950|Caenorhabditis elegans Na/ca exchanger... 28 8.1
U70857-2|AAM29660.1| 975|Caenorhabditis elegans Na/ca exchanger... 28 8.1
U70857-1|AAM29661.1| 925|Caenorhabditis elegans Na/ca exchanger... 28 8.1
AJ001181-1|CAA04574.1| 925|Caenorhabditis elegans sodium-calciu... 28 8.1
>Z66560-1|CAA91449.1| 214|Caenorhabditis elegans Hypothetical
protein D1053.1 protein.
Length = 214
Score = 35.1 bits (77), Expect = 0.054
Identities = 20/54 (37%), Positives = 30/54 (55%)
Frame = -3
Query: 616 ALQLLDKFLEGQKYVAGPNLTVADLSLIASVSSLEASDIDFKKYANVKRWYETV 455
AL++L K G KY G ++T+ADLS+ + S ++D Y V R ET+
Sbjct: 141 ALEILLKQHSG-KYAVGDDVTIADLSIPPLIYSANRFNLDLSPYPTVNRINETL 193
>AC024200-13|AAF36004.1| 214|Caenorhabditis elegans Glutathione
s-transferase protein43 protein.
Length = 214
Score = 31.5 bits (68), Expect = 0.66
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = -3
Query: 634 NEKVQEALQLLDKFLEGQ--KYVAGPNLTVADLSLIASVSSLEASDIDFKKYANVKR 470
N V + L++ L+ KY G LT+AD++L + + + + +D KY + R
Sbjct: 132 NHFVNKGFLALEELLKKHSGKYCVGDQLTIADINLPSIIYNAKIYKVDMSKYPTITR 188
>Z80217-4|CAB02290.1| 213|Caenorhabditis elegans Hypothetical
protein F37B1.4 protein.
Length = 213
Score = 31.1 bits (67), Expect = 0.87
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 5/59 (8%)
Frame = -3
Query: 607 LLDKFLEGQK--YVAGPNLTVADLSLIASVSSLE---ASDIDFKKYANVKRWYETVKST 446
LL++ L+ K Y+ G LT ADL + ++ SLE A D D + + N+K++ E + T
Sbjct: 140 LLNRILKKSKSGYLVGDGLTWADLVIADNLHSLEKLRAIDDDDEGHQNLKKYKEKIYGT 198
>U53344-4|AAA96225.2| 575|Caenorhabditis elegans Hypothetical
protein T07H6.5 protein.
Length = 575
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 619 PVPSRSWPCRLGHRRILGDRNNH*ISGTKFRCRN 720
P+ +WP R+ H RIL +++H S K+ C N
Sbjct: 375 PLSCHNWPPRVPHARILFSKSSH-GSIAKYECNN 407
>Z99279-2|CAD89758.1| 500|Caenorhabditis elegans Hypothetical
protein Y57G11A.1b protein.
Length = 500
Score = 27.9 bits (59), Expect = 8.1
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = -3
Query: 547 DLSLIASVSSLEASDIDFKKYANVK-RWYETVKSTAPGYQEANEKGLEAXQG 395
D ++I E +++F+ ++K +W E TA + A K LEA +G
Sbjct: 78 DPNIIRGSKKAEKVELNFENVGDIKNKWKEGNVETAEAKEAAERKELEALKG 129
>Z99279-1|CAB16496.4| 598|Caenorhabditis elegans Hypothetical
protein Y57G11A.1a protein.
Length = 598
Score = 27.9 bits (59), Expect = 8.1
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = -3
Query: 547 DLSLIASVSSLEASDIDFKKYANVK-RWYETVKSTAPGYQEANEKGLEAXQG 395
D ++I E +++F+ ++K +W E TA + A K LEA +G
Sbjct: 78 DPNIIRGSKKAEKVELNFENVGDIKNKWKEGNVETAEAKEAAERKELEALKG 129
>U70857-3|AAN84873.1| 950|Caenorhabditis elegans Na/ca exchangers
protein 2, isoformd protein.
Length = 950
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +2
Query: 491 LEVNVRGFQAGDTGDETQVG 550
+EV RGF+AGD G T VG
Sbjct: 135 IEVIARGFEAGDLGPNTIVG 154
>U70857-2|AAM29660.1| 975|Caenorhabditis elegans Na/ca exchangers
protein 2, isoforma protein.
Length = 975
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +2
Query: 491 LEVNVRGFQAGDTGDETQVG 550
+EV RGF+AGD G T VG
Sbjct: 135 IEVIARGFEAGDLGPNTIVG 154
>U70857-1|AAM29661.1| 925|Caenorhabditis elegans Na/ca exchangers
protein 2, isoformb protein.
Length = 925
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +2
Query: 491 LEVNVRGFQAGDTGDETQVG 550
+EV RGF+AGD G T VG
Sbjct: 135 IEVIARGFEAGDLGPNTIVG 154
>AJ001181-1|CAA04574.1| 925|Caenorhabditis elegans sodium-calcium
exchanger protein.
Length = 925
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +2
Query: 491 LEVNVRGFQAGDTGDETQVG 550
+EV RGF+AGD G T VG
Sbjct: 135 IEVIARGFEAGDLGPNTIVG 154
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,085,577
Number of Sequences: 27780
Number of extensions: 290938
Number of successful extensions: 767
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 728
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 765
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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