Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_pT_E18
(683 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0658 + 4923205-4923334,4923448-4923526,4923629-4923723,492... 51 1e-06
03_05_0170 + 21482962-21483018,21483133-21483183,21483313-214835... 41 8e-04
07_03_0878 - 22251023-22251166,22251279-22251329,22251425-222515... 37 0.013
12_01_0537 - 4215833-4216005,4216168-4216366,4216399-4216497,421... 36 0.030
07_03_1140 - 24258627-24258849,24259967-24260089,24260200-242609... 32 0.37
04_01_0480 + 6279576-6279755,6279863-6279988,6280074-6280151,628... 30 2.0
01_06_1519 + 37942389-37943702,37944142-37944266,37944358-379444... 29 3.4
02_05_1139 - 34381575-34381878,34382181-34382865,34383479-34383881 29 4.5
09_06_0276 + 21980147-21980285,21980369-21980550,21980867-219811... 28 6.0
08_01_0327 - 2942640-2943456,2944386-2944515,2944679-2944811 28 6.0
06_03_1496 - 30567968-30568210,30568345-30568513,30568635-305687... 28 6.0
06_01_0433 - 3078576-3078780,3078797-3078951,3079782-3079821,307... 28 6.0
03_02_0583 + 9635002-9637299 28 6.0
02_04_0129 + 20020388-20021215 28 6.0
01_03_0151 - 13229861-13230347,13230442-13230540,13230701-132309... 28 6.0
10_08_0149 + 15223441-15223568,15223697-15223751,15223936-152239... 28 7.9
07_03_0879 - 22256033-22256173,22256417-22256492,22256830-222572... 28 7.9
02_05_0220 - 26885502-26885561,26885940-26886739,26887055-268874... 28 7.9
>07_01_0658 +
4923205-4923334,4923448-4923526,4923629-4923723,
4923802-4923851,4924216-4924340,4924703-4924769,
4924871-4924960,4925281-4925392,4925597-4925667
Length = 272
Score = 50.8 bits (116), Expect = 1e-06
Identities = 50/190 (26%), Positives = 80/190 (42%), Gaps = 4/190 (2%)
Frame = -3
Query: 651 VWV-DPLDGTSEYTQGFLXHVTVLIGIAVNETPVAGVIHQPYYKNIVEGDKKIGRTIWGL 475
VWV DP+DGT + G T LI + PV G+I QP + G + T+ G
Sbjct: 87 VWVLDPIDGTKSFITGKPLFGT-LISLLYKGKPVIGIIDQPILRERWVGVDGMKTTLNGQ 145
Query: 474 HGVGVGGFTPAPPPESIVITTTRSH--SNPVVEEALKVMNASKVLRVGGAGYKVLQLLEG 301
+ V P + TT H + + ++V + KV G Y L G
Sbjct: 146 E-ISV---RPCNVLAQAYLYTTSPHLFAGEAEDAFIRVRDKVKVPLYGCDCYAYALLASG 201
Query: 300 NASIYVFASPGCKKWDTCAPEAILSAAGGKLTDILGNFYKYGANV-TKPNKTGVLAAVNN 124
+ V G K +D + ++ AGG +TD GN + + ++P V+A+ +
Sbjct: 202 FVDLVV--ESGLKPYDFLSLVPVIEGAGGSITDWKGNKLHWPVSAESRPESFNVVASGDA 259
Query: 123 ELHSYALERI 94
+H AL+ +
Sbjct: 260 RVHKQALDAL 269
>03_05_0170 +
21482962-21483018,21483133-21483183,21483313-21483500,
21483587-21483671,21483848-21483902,21483998-21484041,
21485045-21485113,21485207-21485307,21485396-21485452,
21485540-21485636
Length = 267
Score = 41.1 bits (92), Expect = 8e-04
Identities = 20/44 (45%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = -3
Query: 660 DIVVW-VDPLDGTSEYTQGFLXHVTVLIGIAVNETPVAGVIHQP 532
D W VDPLDGT+ + GF V V IG+ V + P GV++ P
Sbjct: 81 DDPTWIVDPLDGTTNFVHGF-PFVCVSIGLTVGKIPTVGVVYNP 123
>07_03_0878 -
22251023-22251166,22251279-22251329,22251425-22251500,
22251847-22252229,22252983-22253042,22253133-22253368,
22253457-22253559,22254692-22254824,22254930-22255039
Length = 431
Score = 37.1 bits (82), Expect = 0.013
Identities = 30/119 (25%), Positives = 51/119 (42%), Gaps = 5/119 (4%)
Frame = -3
Query: 435 PESIVITTTRSHSNPVVEEALKVMNASKVLRVGGAGYKVLQLLEGNASIYVFAS--PGCK 262
P S++ +T SNP E + +++ G+ K L + G AS++V + K
Sbjct: 313 PLSVLFNSTMDESNPRDENEILLLSV-----YCGSLCKYLTVASGRASVFVLRARTKNLK 367
Query: 261 KWDTCAPEAILSAAGGKLTDILGNFYKYGANVTKPN---KTGVLAAVNNELHSYALERI 94
WD + AGG+++D G A++T +G + N LH +E I
Sbjct: 368 SWDHAVGVICVQEAGGQISDWSGKPLDLAADLTGRRDIYPSGGVLVTNGALHGKLVEMI 426
Score = 33.9 bits (74), Expect = 0.12
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = -3
Query: 648 WV-DPLDGTSEYTQGFLXHVTVLIGIAVNETPVAGVIHQPYYKNIVEGDKK 499
WV DP+DGT + G V + + VNE VAGV+ P + N +K
Sbjct: 194 WVLDPIDGTKGFLGGDDALYVVGLALVVNEKVVAGVMGCPNWSNATIASRK 244
>12_01_0537 -
4215833-4216005,4216168-4216366,4216399-4216497,
4216599-4216809,4217264-4217466,4217557-4217633,
4217874-4217949,4218342-4218425
Length = 373
Score = 35.9 bits (79), Expect = 0.030
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Frame = -3
Query: 312 LLEGNASIYV-FASPGCKK--WDTCAPEAILSAAGGKLTDILGNFYKYGANVTKPNKTGV 142
L G+ +IY+ F G ++ WD A +++ AGG +TD GN + TG+
Sbjct: 285 LARGDGAIYLRFPHKGYREKIWDHAAGSIVVTEAGGLVTDASGNDLDFSKGRFLDLDTGI 344
Query: 141 LAAVNNELHSYALERIPEKLQE 76
+ A N +L L+ + + ++E
Sbjct: 345 I-ATNKQLMPSLLKAVQDAIKE 365
>07_03_1140 -
24258627-24258849,24259967-24260089,24260200-24260921,
24260945-24261073,24261484-24261714
Length = 475
Score = 32.3 bits (70), Expect = 0.37
Identities = 21/55 (38%), Positives = 24/55 (43%)
Frame = +2
Query: 329 PAPPTLSTFEAFITFSASSTTGFEWLLVVVITMDSGGGAGVNPPTPTPCSPQIVL 493
P PP ST A++ E LL + SGGG G PP P P S VL
Sbjct: 19 PQPPP-STGGGIPQLPAAAAAPVEGLLDAPFSSSSGGGGGGWPPPPPPLSGTAVL 72
>04_01_0480 +
6279576-6279755,6279863-6279988,6280074-6280151,
6280847-6280972,6281244-6281345,6281416-6281490,
6281852-6281975,6283005-6283107,6283546-6283617,
6283662-6283788,6284125-6284180,6284438-6284453
Length = 394
Score = 29.9 bits (64), Expect = 2.0
Identities = 19/49 (38%), Positives = 25/49 (51%)
Frame = +2
Query: 305 SNNCRTL*PAPPTLSTFEAFITFSASSTTGFEWLLVVVITMDSGGGAGV 451
+N RT LS E ++ ST+G E LLVVV + GGG G+
Sbjct: 242 TNQLRTRLSKLRKLSLKEEILSDEQGSTSGVELLLVVVWQLWLGGGGGL 290
>01_06_1519 +
37942389-37943702,37944142-37944266,37944358-37944499,
37944602-37944848,37946139-37946196,37947629-37947913,
37947988-37948120
Length = 767
Score = 29.1 bits (62), Expect = 3.4
Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 12/104 (11%)
Frame = -3
Query: 453 FTP-APPPESIVITTTR---SHSNPVVEEALKVMNASK-VLRVGGAGYKVLQLLEGNASI 289
FTP A ++++ TR ++ P+++ + KV K VL + K +LL +
Sbjct: 548 FTPDAEGGYTVIVQKTRKVPANEEPIMKGSFKVGEPGKIVLTINNPASKKKKLLYRSKVK 607
Query: 288 YVFAS---PGCKKW----DTCAPEAILSAAGGKLTDILGNFYKY 178
A+ GCKK DT + ++ AAGG +T++ +F ++
Sbjct: 608 STTATGRVSGCKKGCQYQDTTSSNVLVCAAGGFVTEVSLSFLQF 651
>02_05_1139 - 34381575-34381878,34382181-34382865,34383479-34383881
Length = 463
Score = 28.7 bits (61), Expect = 4.5
Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Frame = -3
Query: 324 KVLQLLEGNASIYV-FASPGCKK--WDTCAPEAILSAAGGKLTDILGNFYKYGANV-TKP 157
K + G+ I++ FA G K+ WD A I+ AGG +TD G + V +
Sbjct: 374 KYAAIARGDVEIFMKFARAGYKEKIWDHAAGVVIIREAGGVITDAGGRPLDFSRGVFLEG 433
Query: 156 NKTGVLAAVNNELH 115
G++A LH
Sbjct: 434 LDRGIIACSGPLLH 447
>09_06_0276 +
21980147-21980285,21980369-21980550,21980867-21981137,
21981263-21981351,21981474-21981538,21981656-21981758,
21982215-21982325,21982441-21982509,21982553-21982687
Length = 387
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +2
Query: 425 MDSGGGAGVNPPTPTPCSPQIVLPIFLSP 511
MD GG+G PP P P + V I + P
Sbjct: 1 MDKAGGSGEAPPEPEPAAAATVKSIVVYP 29
>08_01_0327 - 2942640-2943456,2944386-2944515,2944679-2944811
Length = 359
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = -3
Query: 465 GVGGFTPAPPPESIVITTTRSHSNPVVEEALKVMNA 358
G GG PPP S++ T H +P + M A
Sbjct: 205 GAGGAISPPPPSSLIPTHLHHHHHPFIASFTAAMAA 240
>06_03_1496 - 30567968-30568210,30568345-30568513,30568635-30568736,
30569087-30571855,30572402-30572430,30572546-30572659,
30572735-30572846,30574730-30574845,30574928-30575068,
30575121-30575243,30575346-30575478,30575842-30575972,
30576065-30576300,30577073-30577376
Length = 1573
Score = 28.3 bits (60), Expect = 6.0
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 5/69 (7%)
Frame = -3
Query: 291 IYVFASPGCKKWDTCAPEAILSAAGGKLT----DILGNFYKYGANV-TKPNKTGVLAAVN 127
+Y A+ +KW + IL G + + +L N AN+ + N + VLA+ N
Sbjct: 1105 LYSAAAHVSQKWVAVGKKNILHFDGSETSAVDSSVLTNCIPISANIGVETNVSSVLASAN 1164
Query: 126 NELHSYALE 100
NE++ A E
Sbjct: 1165 NEVNKLAAE 1173
>06_01_0433 -
3078576-3078780,3078797-3078951,3079782-3079821,
3079957-3080009,3080091-3080199,3080324-3080448,
3081112-3081201,3081280-3081342,3081453-3081544,
3081641-3081722,3081913-3082086,3082183-3082264,
3083100-3083224,3083312-3083389,3084047-3084402,
3085311-3085608
Length = 708
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +2
Query: 416 VITMDSGGGAGVNPPTPTPCSPQIVLPIFLSPST 517
V + GG+ P P P Q VLP FL P++
Sbjct: 35 VAELSRDGGSAQRPLAPAPLVKQPVLPTFLVPTS 68
>03_02_0583 + 9635002-9637299
Length = 765
Score = 28.3 bits (60), Expect = 6.0
Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Frame = -3
Query: 675 EVKEEDIVVWVDPLDGTSEYTQGFLXHVTVLIGIAVNETPVAGVIHQPYYKNIVEGDKKI 496
++ + I++++D + T F+ V VL GIA + + V IHQP Y+ I D+ +
Sbjct: 269 DIIHDPIILFLDEPTSGLDSTSAFMV-VKVLQGIAKSGSVVIMSIHQPSYRIIGLIDRLM 327
Query: 495 ----GRTIW 481
GRT++
Sbjct: 328 FLSRGRTVY 336
>02_04_0129 + 20020388-20021215
Length = 275
Score = 28.3 bits (60), Expect = 6.0
Identities = 19/65 (29%), Positives = 25/65 (38%), Gaps = 2/65 (3%)
Frame = +2
Query: 329 PAPPTLSTFEAFITFSASSTTGFEWLLVVVITMDSGGGAGVNPP--TPTPCSPQIVLPIF 502
P P L + FS WL + + S G A PP P+P S + P
Sbjct: 197 PVPSALPPAASSGLFSPLDQASLSWLSDLSPFLHSAGAAAAPPPPFAPSPRSLLLSTPTM 256
Query: 503 LSPST 517
SP+T
Sbjct: 257 PSPAT 261
>01_03_0151 -
13229861-13230347,13230442-13230540,13230701-13230918,
13231210-13231317,13231366-13231518,13232962-13233015,
13233276-13233374,13234458-13234551,13234638-13234715,
13237696-13237766,13238321-13238416,13238505-13238582,
13238683-13238751,13238830-13238897,13239038-13239115,
13239190-13239289,13240002-13240061,13240488-13240579,
13241730-13241779,13241870-13241954,13242035-13242134,
13242933-13243013,13244827-13244907
Length = 832
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 558 VSHSQLYQLVQSHVLRILEYILKFH 632
V + Y ++QS VL +LEYI K H
Sbjct: 500 VENGDRYNMLQSGVLELLEYIRKVH 524
>10_08_0149 +
15223441-15223568,15223697-15223751,15223936-15223983,
15224901-15225008
Length = 112
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/52 (30%), Positives = 22/52 (42%)
Frame = +2
Query: 434 GGGAGVNPPTPTPCSPQIVLPIFLSPSTIFL*YG*WMTPATGVSFTAIPIST 589
GGG G P + +V P+ P G ++ A GVSF +P T
Sbjct: 16 GGGGGSGGGIPQALADALVCPLSKKPLRYCEDSGSLVSDAVGVSFPVVPSDT 67
>07_03_0879 -
22256033-22256173,22256417-22256492,22256830-22257212,
22257924-22257983,22258073-22258303,22258475-22258562,
22259265-22259365,22259586-22259727,22259824-22259939
Length = 445
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = -3
Query: 648 WV-DPLDGTSEYTQGFLXHVTVLIGIAVNETPVAGVIHQPYYKNIVEGDKK 499
WV DP+DGT +++ V + + VN VAGV+ P + + ++K
Sbjct: 226 WVLDPIDGTQGFSKVDDTLYVVGLALVVNGKVVAGVMGSPNWASDTIANRK 276
>02_05_0220 - 26885502-26885561,26885940-26886739,26887055-26887421,
26887942-26888055,26888132-26888228,26889115-26889235,
26889306-26889390,26889494-26889643,26889871-26889987,
26890123-26890221,26890439-26890495,26890581-26890664,
26890759-26890828,26891015-26891169,26891557-26892095,
26892327-26892393,26892436-26892984,26893574-26893768,
26894485-26894569,26895822-26896441,26897154-26897486,
26897552-26897616,26897868-26897955,26898250-26898331,
26898720-26898796,26899152-26899256,26899496-26899630,
26900199-26900888,26901474-26902261,26902990-26904673
Length = 2825
Score = 27.9 bits (59), Expect = 7.9
Identities = 18/77 (23%), Positives = 30/77 (38%), Gaps = 2/77 (2%)
Frame = -3
Query: 558 PVAGVIHQPYYKNIVEGDKKIGRTIWGLHGVGV--GGFTPAPPPESIVITTTRSHSNPVV 385
PV V P +V G + +W + +G TP PPP + + +
Sbjct: 2567 PVTCVALSPDSNYLVTGSRDTTVILWRIRQIGSLRKKSTPEPPPSTPTTPNDSASGDSST 2626
Query: 384 EEALKVMNASKVLRVGG 334
+ KV+ S+ R+ G
Sbjct: 2627 SNSSKVLETSRRRRIEG 2643
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,752,524
Number of Sequences: 37544
Number of extensions: 487807
Number of successful extensions: 1650
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1543
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1636
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1733104716
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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