Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_E16
         (704 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058505-1|AAL13734.1|  422|Drosophila melanogaster LD21309p pro...   223   2e-58
AF325529-1|AAK01218.1|  422|Drosophila melanogaster elongation i...   223   2e-58
AE014297-297|AAN13249.1|  422|Drosophila melanogaster CG2922-PG,...   223   2e-58
AE014297-296|AAN13248.1|  422|Drosophila melanogaster CG2922-PF,...   223   2e-58
AE014297-295|AAN13247.1|  422|Drosophila melanogaster CG2922-PE,...   223   2e-58
AE014297-294|AAN13246.1|  422|Drosophila melanogaster CG2922-PD,...   223   2e-58
AE014297-293|AAF51995.1|  422|Drosophila melanogaster CG2922-PC,...   223   2e-58
AE014297-292|AAG22214.1|  422|Drosophila melanogaster CG2922-PB,...   223   2e-58
AE014297-291|AAF51996.1|  422|Drosophila melanogaster CG2922-PA,...   223   2e-58
AJ556818-1|CAD89223.1| 2162|Drosophila melanogaster SMG1 protein...    29   4.7  
AE014298-963|AAF46207.2| 3218|Drosophila melanogaster CG32743-PA...    29   4.7  
AY058429-1|AAL13658.1|  414|Drosophila melanogaster GH20802p pro...    29   8.1  
AE014298-1106|AAF46311.1|  414|Drosophila melanogaster CG2233-PA...    29   8.1  

>AY058505-1|AAL13734.1|  422|Drosophila melanogaster LD21309p
           protein.
          Length = 422

 Score =  223 bits (544), Expect = 2e-58
 Identities = 91/162 (56%), Positives = 134/162 (82%)
 Frame = -3

Query: 702 HRAQASQEARRELTASLXEQLAEEKVIRDVITDLREMAQRHHIPDHDVVTIVWQCVMSRG 523
           H+AQASQEA+REL  +L + + +EK   ++ +D+++ +QR +IPDH+++ I+W  +MS G
Sbjct: 246 HKAQASQEAKRELQQALIDDINDEKPYNEITSDIKDFSQRTNIPDHEIIVIIWSTIMSLG 305

Query: 522 EWNKKEELIAEQAAKHLRHYTPLLAAFAQSARAELALLTKVQEYCYENMSFMRAFSKLVV 343
           EWNKKEEL+ +QA +HL++Y PLL AFA + R+ELAL+ KVQE+CYENM+FM+AF K+++
Sbjct: 306 EWNKKEELVTDQAVRHLKNYCPLLQAFASTDRSELALILKVQEFCYENMNFMKAFQKIIL 365

Query: 342 MLYKTSVLSEEVILKWYKDTSSSKGKVMFLDQMKKFVDWLQN 217
           + YKT VLSEE+IL+WYK+  S+KGK+ FL+QM+KFV+WLQ+
Sbjct: 366 LFYKTEVLSEEIILRWYKEGHSNKGKMHFLEQMRKFVEWLQS 407


>AF325529-1|AAK01218.1|  422|Drosophila melanogaster elongation
           initiation factor 5C protein.
          Length = 422

 Score =  223 bits (544), Expect = 2e-58
 Identities = 91/162 (56%), Positives = 134/162 (82%)
 Frame = -3

Query: 702 HRAQASQEARRELTASLXEQLAEEKVIRDVITDLREMAQRHHIPDHDVVTIVWQCVMSRG 523
           H+AQASQEA+REL  +L + + +EK   ++ +D+++ +QR +IPDH+++ I+W  +MS G
Sbjct: 246 HKAQASQEAKRELQQALIDDINDEKPYNEITSDIKDFSQRTNIPDHEIIVIIWSTIMSLG 305

Query: 522 EWNKKEELIAEQAAKHLRHYTPLLAAFAQSARAELALLTKVQEYCYENMSFMRAFSKLVV 343
           EWNKKEEL+ +QA +HL++Y PLL AFA + R+ELAL+ KVQE+CYENM+FM+AF K+++
Sbjct: 306 EWNKKEELVTDQAVRHLKNYCPLLQAFASTDRSELALILKVQEFCYENMNFMKAFQKIIL 365

Query: 342 MLYKTSVLSEEVILKWYKDTSSSKGKVMFLDQMKKFVDWLQN 217
           + YKT VLSEE+IL+WYK+  S+KGK+ FL+QM+KFV+WLQ+
Sbjct: 366 LFYKTEVLSEEIILRWYKEGHSNKGKMHFLEQMRKFVEWLQS 407


>AE014297-297|AAN13249.1|  422|Drosophila melanogaster CG2922-PG,
           isoform G protein.
          Length = 422

 Score =  223 bits (544), Expect = 2e-58
 Identities = 91/162 (56%), Positives = 134/162 (82%)
 Frame = -3

Query: 702 HRAQASQEARRELTASLXEQLAEEKVIRDVITDLREMAQRHHIPDHDVVTIVWQCVMSRG 523
           H+AQASQEA+REL  +L + + +EK   ++ +D+++ +QR +IPDH+++ I+W  +MS G
Sbjct: 246 HKAQASQEAKRELQQALIDDINDEKPYNEITSDIKDFSQRTNIPDHEIIVIIWSTIMSLG 305

Query: 522 EWNKKEELIAEQAAKHLRHYTPLLAAFAQSARAELALLTKVQEYCYENMSFMRAFSKLVV 343
           EWNKKEEL+ +QA +HL++Y PLL AFA + R+ELAL+ KVQE+CYENM+FM+AF K+++
Sbjct: 306 EWNKKEELVTDQAVRHLKNYCPLLQAFASTDRSELALILKVQEFCYENMNFMKAFQKIIL 365

Query: 342 MLYKTSVLSEEVILKWYKDTSSSKGKVMFLDQMKKFVDWLQN 217
           + YKT VLSEE+IL+WYK+  S+KGK+ FL+QM+KFV+WLQ+
Sbjct: 366 LFYKTEVLSEEIILRWYKEGHSNKGKMHFLEQMRKFVEWLQS 407


>AE014297-296|AAN13248.1|  422|Drosophila melanogaster CG2922-PF,
           isoform F protein.
          Length = 422

 Score =  223 bits (544), Expect = 2e-58
 Identities = 91/162 (56%), Positives = 134/162 (82%)
 Frame = -3

Query: 702 HRAQASQEARRELTASLXEQLAEEKVIRDVITDLREMAQRHHIPDHDVVTIVWQCVMSRG 523
           H+AQASQEA+REL  +L + + +EK   ++ +D+++ +QR +IPDH+++ I+W  +MS G
Sbjct: 246 HKAQASQEAKRELQQALIDDINDEKPYNEITSDIKDFSQRTNIPDHEIIVIIWSTIMSLG 305

Query: 522 EWNKKEELIAEQAAKHLRHYTPLLAAFAQSARAELALLTKVQEYCYENMSFMRAFSKLVV 343
           EWNKKEEL+ +QA +HL++Y PLL AFA + R+ELAL+ KVQE+CYENM+FM+AF K+++
Sbjct: 306 EWNKKEELVTDQAVRHLKNYCPLLQAFASTDRSELALILKVQEFCYENMNFMKAFQKIIL 365

Query: 342 MLYKTSVLSEEVILKWYKDTSSSKGKVMFLDQMKKFVDWLQN 217
           + YKT VLSEE+IL+WYK+  S+KGK+ FL+QM+KFV+WLQ+
Sbjct: 366 LFYKTEVLSEEIILRWYKEGHSNKGKMHFLEQMRKFVEWLQS 407


>AE014297-295|AAN13247.1|  422|Drosophila melanogaster CG2922-PE,
           isoform E protein.
          Length = 422

 Score =  223 bits (544), Expect = 2e-58
 Identities = 91/162 (56%), Positives = 134/162 (82%)
 Frame = -3

Query: 702 HRAQASQEARRELTASLXEQLAEEKVIRDVITDLREMAQRHHIPDHDVVTIVWQCVMSRG 523
           H+AQASQEA+REL  +L + + +EK   ++ +D+++ +QR +IPDH+++ I+W  +MS G
Sbjct: 246 HKAQASQEAKRELQQALIDDINDEKPYNEITSDIKDFSQRTNIPDHEIIVIIWSTIMSLG 305

Query: 522 EWNKKEELIAEQAAKHLRHYTPLLAAFAQSARAELALLTKVQEYCYENMSFMRAFSKLVV 343
           EWNKKEEL+ +QA +HL++Y PLL AFA + R+ELAL+ KVQE+CYENM+FM+AF K+++
Sbjct: 306 EWNKKEELVTDQAVRHLKNYCPLLQAFASTDRSELALILKVQEFCYENMNFMKAFQKIIL 365

Query: 342 MLYKTSVLSEEVILKWYKDTSSSKGKVMFLDQMKKFVDWLQN 217
           + YKT VLSEE+IL+WYK+  S+KGK+ FL+QM+KFV+WLQ+
Sbjct: 366 LFYKTEVLSEEIILRWYKEGHSNKGKMHFLEQMRKFVEWLQS 407


>AE014297-294|AAN13246.1|  422|Drosophila melanogaster CG2922-PD,
           isoform D protein.
          Length = 422

 Score =  223 bits (544), Expect = 2e-58
 Identities = 91/162 (56%), Positives = 134/162 (82%)
 Frame = -3

Query: 702 HRAQASQEARRELTASLXEQLAEEKVIRDVITDLREMAQRHHIPDHDVVTIVWQCVMSRG 523
           H+AQASQEA+REL  +L + + +EK   ++ +D+++ +QR +IPDH+++ I+W  +MS G
Sbjct: 246 HKAQASQEAKRELQQALIDDINDEKPYNEITSDIKDFSQRTNIPDHEIIVIIWSTIMSLG 305

Query: 522 EWNKKEELIAEQAAKHLRHYTPLLAAFAQSARAELALLTKVQEYCYENMSFMRAFSKLVV 343
           EWNKKEEL+ +QA +HL++Y PLL AFA + R+ELAL+ KVQE+CYENM+FM+AF K+++
Sbjct: 306 EWNKKEELVTDQAVRHLKNYCPLLQAFASTDRSELALILKVQEFCYENMNFMKAFQKIIL 365

Query: 342 MLYKTSVLSEEVILKWYKDTSSSKGKVMFLDQMKKFVDWLQN 217
           + YKT VLSEE+IL+WYK+  S+KGK+ FL+QM+KFV+WLQ+
Sbjct: 366 LFYKTEVLSEEIILRWYKEGHSNKGKMHFLEQMRKFVEWLQS 407


>AE014297-293|AAF51995.1|  422|Drosophila melanogaster CG2922-PC,
           isoform C protein.
          Length = 422

 Score =  223 bits (544), Expect = 2e-58
 Identities = 91/162 (56%), Positives = 134/162 (82%)
 Frame = -3

Query: 702 HRAQASQEARRELTASLXEQLAEEKVIRDVITDLREMAQRHHIPDHDVVTIVWQCVMSRG 523
           H+AQASQEA+REL  +L + + +EK   ++ +D+++ +QR +IPDH+++ I+W  +MS G
Sbjct: 246 HKAQASQEAKRELQQALIDDINDEKPYNEITSDIKDFSQRTNIPDHEIIVIIWSTIMSLG 305

Query: 522 EWNKKEELIAEQAAKHLRHYTPLLAAFAQSARAELALLTKVQEYCYENMSFMRAFSKLVV 343
           EWNKKEEL+ +QA +HL++Y PLL AFA + R+ELAL+ KVQE+CYENM+FM+AF K+++
Sbjct: 306 EWNKKEELVTDQAVRHLKNYCPLLQAFASTDRSELALILKVQEFCYENMNFMKAFQKIIL 365

Query: 342 MLYKTSVLSEEVILKWYKDTSSSKGKVMFLDQMKKFVDWLQN 217
           + YKT VLSEE+IL+WYK+  S+KGK+ FL+QM+KFV+WLQ+
Sbjct: 366 LFYKTEVLSEEIILRWYKEGHSNKGKMHFLEQMRKFVEWLQS 407


>AE014297-292|AAG22214.1|  422|Drosophila melanogaster CG2922-PB,
           isoform B protein.
          Length = 422

 Score =  223 bits (544), Expect = 2e-58
 Identities = 91/162 (56%), Positives = 134/162 (82%)
 Frame = -3

Query: 702 HRAQASQEARRELTASLXEQLAEEKVIRDVITDLREMAQRHHIPDHDVVTIVWQCVMSRG 523
           H+AQASQEA+REL  +L + + +EK   ++ +D+++ +QR +IPDH+++ I+W  +MS G
Sbjct: 246 HKAQASQEAKRELQQALIDDINDEKPYNEITSDIKDFSQRTNIPDHEIIVIIWSTIMSLG 305

Query: 522 EWNKKEELIAEQAAKHLRHYTPLLAAFAQSARAELALLTKVQEYCYENMSFMRAFSKLVV 343
           EWNKKEEL+ +QA +HL++Y PLL AFA + R+ELAL+ KVQE+CYENM+FM+AF K+++
Sbjct: 306 EWNKKEELVTDQAVRHLKNYCPLLQAFASTDRSELALILKVQEFCYENMNFMKAFQKIIL 365

Query: 342 MLYKTSVLSEEVILKWYKDTSSSKGKVMFLDQMKKFVDWLQN 217
           + YKT VLSEE+IL+WYK+  S+KGK+ FL+QM+KFV+WLQ+
Sbjct: 366 LFYKTEVLSEEIILRWYKEGHSNKGKMHFLEQMRKFVEWLQS 407


>AE014297-291|AAF51996.1|  422|Drosophila melanogaster CG2922-PA,
           isoform A protein.
          Length = 422

 Score =  223 bits (544), Expect = 2e-58
 Identities = 91/162 (56%), Positives = 134/162 (82%)
 Frame = -3

Query: 702 HRAQASQEARRELTASLXEQLAEEKVIRDVITDLREMAQRHHIPDHDVVTIVWQCVMSRG 523
           H+AQASQEA+REL  +L + + +EK   ++ +D+++ +QR +IPDH+++ I+W  +MS G
Sbjct: 246 HKAQASQEAKRELQQALIDDINDEKPYNEITSDIKDFSQRTNIPDHEIIVIIWSTIMSLG 305

Query: 522 EWNKKEELIAEQAAKHLRHYTPLLAAFAQSARAELALLTKVQEYCYENMSFMRAFSKLVV 343
           EWNKKEEL+ +QA +HL++Y PLL AFA + R+ELAL+ KVQE+CYENM+FM+AF K+++
Sbjct: 306 EWNKKEELVTDQAVRHLKNYCPLLQAFASTDRSELALILKVQEFCYENMNFMKAFQKIIL 365

Query: 342 MLYKTSVLSEEVILKWYKDTSSSKGKVMFLDQMKKFVDWLQN 217
           + YKT VLSEE+IL+WYK+  S+KGK+ FL+QM+KFV+WLQ+
Sbjct: 366 LFYKTEVLSEEIILRWYKEGHSNKGKMHFLEQMRKFVEWLQS 407


>AJ556818-1|CAD89223.1| 2162|Drosophila melanogaster SMG1 protein
            protein.
          Length = 2162

 Score = 29.5 bits (63), Expect = 4.7
 Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
 Frame = -3

Query: 561  VVTIVWQCVMSRGEWNKKEELIAEQAAK-HLRHYTPLLAAFAQSARAELALLTKVQEYC 388
            VV+ + QC+   G+W++  EL  +Q  +   R   P L        A   LL K +E C
Sbjct: 1081 VVSQMMQCLQDLGQWSQLVELKQQQMTRPEDRELNPFLQRSNVEVNALERLLAKSEESC 1139


>AE014298-963|AAF46207.2| 3218|Drosophila melanogaster CG32743-PA
            protein.
          Length = 3218

 Score = 29.5 bits (63), Expect = 4.7
 Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
 Frame = -3

Query: 561  VVTIVWQCVMSRGEWNKKEELIAEQAAK-HLRHYTPLLAAFAQSARAELALLTKVQEYC 388
            VV+ + QC+   G+W++  EL  +Q  +   R   P L        A   LL K +E C
Sbjct: 1081 VVSQMMQCLQDLGQWSQLVELKQQQMTRPEDRELNPFLQRSNVEVNALERLLAKSEESC 1139


>AY058429-1|AAL13658.1|  414|Drosophila melanogaster GH20802p
           protein.
          Length = 414

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 12/41 (29%), Positives = 19/41 (46%)
 Frame = -3

Query: 597 EMAQRHHIPDHDVVTIVWQCVMSRGEWNKKEELIAEQAAKH 475
           EM  RH +   D++T VW  V+  G W    + + +    H
Sbjct: 234 EMVSRHLVVYEDLLTTVWLEVLRSGNWKHWTKAMRDAIGVH 274


>AE014298-1106|AAF46311.1|  414|Drosophila melanogaster CG2233-PA
           protein.
          Length = 414

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 12/41 (29%), Positives = 19/41 (46%)
 Frame = -3

Query: 597 EMAQRHHIPDHDVVTIVWQCVMSRGEWNKKEELIAEQAAKH 475
           EM  RH +   D++T VW  V+  G W    + + +    H
Sbjct: 234 EMVSRHLVVYEDLLTTVWLEVLRSGNWKHWTKAMRDAIGVH 274


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,940,625
Number of Sequences: 53049
Number of extensions: 367203
Number of successful extensions: 1134
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1073
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1128
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3108380451
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)