Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_pT_E15
(746 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL359204-2|CAI39538.1| 3174|Homo sapiens vacuolar protein sortin... 36 0.12
AL359204-1|CAI39537.1| 3095|Homo sapiens vacuolar protein sortin... 36 0.12
AL353710-2|CAH74106.1| 3174|Homo sapiens vacuolar protein sortin... 36 0.12
AL353710-1|CAH74105.1| 3095|Homo sapiens vacuolar protein sortin... 36 0.12
AL158159-2|CAI40936.1| 3174|Homo sapiens vacuolar protein sortin... 36 0.12
AL158159-1|CAI40935.1| 3095|Homo sapiens vacuolar protein sortin... 36 0.12
AJ626859-1|CAF25186.1| 3069|Homo sapiens chorein 1D protein. 36 0.12
AJ608769-1|CAE75581.1| 3135|Homo sapiens chorein 2A protein. 36 0.12
AF337532-1|AAK61861.1| 3174|Homo sapiens chorea-acanthocytosis p... 36 0.12
AB054005-1|BAB59128.1| 3095|Homo sapiens chorein protein. 36 0.12
CR542062-1|CAG46859.1| 373|Homo sapiens PEX3 protein. 32 1.9
BC015506-1|AAH15506.1| 373|Homo sapiens peroxisomal biogenesis ... 32 1.9
BC014551-1|AAH14551.1| 373|Homo sapiens peroxisomal biogenesis ... 32 1.9
AY277600-1|AAQ18039.1| 373|Homo sapiens transformation-related ... 32 1.9
AL031320-5|CAB53744.1| 373|Homo sapiens peroxisomal biogenesis ... 32 1.9
AJ131389-1|CAA10362.1| 373|Homo sapiens PEX3 protein protein. 32 1.9
AJ009866-1|CAA08904.1| 373|Homo sapiens Pex3p protein. 32 1.9
AJ001625-1|CAA04879.1| 373|Homo sapiens Pex3 protein protein. 32 1.9
AB035307-1|BAA97993.1| 373|Homo sapiens Pex3p protein. 32 1.9
AB209996-1|BAE06078.1| 2585|Homo sapiens CENPE variant protein p... 31 3.3
AB065639-1|BAC05865.1| 251|Homo sapiens seven transmembrane hel... 31 5.8
Z15005-1|CAA78727.1| 2663|Homo sapiens CENP-E protein. 30 7.7
>AL359204-2|CAI39538.1| 3174|Homo sapiens vacuolar protein sorting 13
homolog A (S. cerevisiae) protein.
Length = 3174
Score = 36.3 bits (80), Expect = 0.12
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = -3
Query: 414 LKSEPFVDVNKVEIYFVKLLP-VINDLITKNMCKGDNNIPDLLTQQLTLNEKLKLLGAN 241
LK ++D NK +Y V L + DL+T K + N+PDL + T N L+L+ N
Sbjct: 935 LKCPEYLDENKKPVYLVTTLDNTMEDLLTLEYVKAEKNVPDL---KSTYNNVLQLIKVN 990
>AL359204-1|CAI39537.1| 3095|Homo sapiens vacuolar protein sorting 13
homolog A (S. cerevisiae) protein.
Length = 3095
Score = 36.3 bits (80), Expect = 0.12
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = -3
Query: 414 LKSEPFVDVNKVEIYFVKLLP-VINDLITKNMCKGDNNIPDLLTQQLTLNEKLKLLGAN 241
LK ++D NK +Y V L + DL+T K + N+PDL + T N L+L+ N
Sbjct: 935 LKCPEYLDENKKPVYLVTTLDNTMEDLLTLEYVKAEKNVPDL---KSTYNNVLQLIKVN 990
>AL353710-2|CAH74106.1| 3174|Homo sapiens vacuolar protein sorting 13
homolog A (S. cerevisiae) protein.
Length = 3174
Score = 36.3 bits (80), Expect = 0.12
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = -3
Query: 414 LKSEPFVDVNKVEIYFVKLLP-VINDLITKNMCKGDNNIPDLLTQQLTLNEKLKLLGAN 241
LK ++D NK +Y V L + DL+T K + N+PDL + T N L+L+ N
Sbjct: 935 LKCPEYLDENKKPVYLVTTLDNTMEDLLTLEYVKAEKNVPDL---KSTYNNVLQLIKVN 990
>AL353710-1|CAH74105.1| 3095|Homo sapiens vacuolar protein sorting 13
homolog A (S. cerevisiae) protein.
Length = 3095
Score = 36.3 bits (80), Expect = 0.12
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = -3
Query: 414 LKSEPFVDVNKVEIYFVKLLP-VINDLITKNMCKGDNNIPDLLTQQLTLNEKLKLLGAN 241
LK ++D NK +Y V L + DL+T K + N+PDL + T N L+L+ N
Sbjct: 935 LKCPEYLDENKKPVYLVTTLDNTMEDLLTLEYVKAEKNVPDL---KSTYNNVLQLIKVN 990
>AL158159-2|CAI40936.1| 3174|Homo sapiens vacuolar protein sorting 13
homolog A (S. cerevisiae) protein.
Length = 3174
Score = 36.3 bits (80), Expect = 0.12
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = -3
Query: 414 LKSEPFVDVNKVEIYFVKLLP-VINDLITKNMCKGDNNIPDLLTQQLTLNEKLKLLGAN 241
LK ++D NK +Y V L + DL+T K + N+PDL + T N L+L+ N
Sbjct: 935 LKCPEYLDENKKPVYLVTTLDNTMEDLLTLEYVKAEKNVPDL---KSTYNNVLQLIKVN 990
>AL158159-1|CAI40935.1| 3095|Homo sapiens vacuolar protein sorting 13
homolog A (S. cerevisiae) protein.
Length = 3095
Score = 36.3 bits (80), Expect = 0.12
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = -3
Query: 414 LKSEPFVDVNKVEIYFVKLLP-VINDLITKNMCKGDNNIPDLLTQQLTLNEKLKLLGAN 241
LK ++D NK +Y V L + DL+T K + N+PDL + T N L+L+ N
Sbjct: 935 LKCPEYLDENKKPVYLVTTLDNTMEDLLTLEYVKAEKNVPDL---KSTYNNVLQLIKVN 990
>AJ626859-1|CAF25186.1| 3069|Homo sapiens chorein 1D protein.
Length = 3069
Score = 36.3 bits (80), Expect = 0.12
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = -3
Query: 414 LKSEPFVDVNKVEIYFVKLLP-VINDLITKNMCKGDNNIPDLLTQQLTLNEKLKLLGAN 241
LK ++D NK +Y V L + DL+T K + N+PDL + T N L+L+ N
Sbjct: 935 LKCPEYLDENKKPVYLVTTLDNTMEDLLTLEYVKAEKNVPDL---KSTYNNVLQLIKVN 990
>AJ608769-1|CAE75581.1| 3135|Homo sapiens chorein 2A protein.
Length = 3135
Score = 36.3 bits (80), Expect = 0.12
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = -3
Query: 414 LKSEPFVDVNKVEIYFVKLLP-VINDLITKNMCKGDNNIPDLLTQQLTLNEKLKLLGAN 241
LK ++D NK +Y V L + DL+T K + N+PDL + T N L+L+ N
Sbjct: 935 LKCPEYLDENKKPVYLVTTLDNTMEDLLTLEYVKAEKNVPDL---KSTYNNVLQLIKVN 990
>AF337532-1|AAK61861.1| 3174|Homo sapiens chorea-acanthocytosis
protein.
Length = 3174
Score = 36.3 bits (80), Expect = 0.12
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = -3
Query: 414 LKSEPFVDVNKVEIYFVKLLP-VINDLITKNMCKGDNNIPDLLTQQLTLNEKLKLLGAN 241
LK ++D NK +Y V L + DL+T K + N+PDL + T N L+L+ N
Sbjct: 935 LKCPEYLDENKKPVYLVTTLDNTMEDLLTLEYVKAEKNVPDL---KSTYNNVLQLIKVN 990
>AB054005-1|BAB59128.1| 3095|Homo sapiens chorein protein.
Length = 3095
Score = 36.3 bits (80), Expect = 0.12
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = -3
Query: 414 LKSEPFVDVNKVEIYFVKLLP-VINDLITKNMCKGDNNIPDLLTQQLTLNEKLKLLGAN 241
LK ++D NK +Y V L + DL+T K + N+PDL + T N L+L+ N
Sbjct: 935 LKCPEYLDENKKPVYLVTTLDNTMEDLLTLEYVKAEKNVPDL---KSTYNNVLQLIKVN 990
>CR542062-1|CAG46859.1| 373|Homo sapiens PEX3 protein.
Length = 373
Score = 32.3 bits (70), Expect = 1.9
Identities = 17/56 (30%), Positives = 30/56 (53%)
Frame = -3
Query: 390 VNKVEIYFVKLLPVINDLITKNMCKGDNNIPDLLTQQLTLNEKLKLLGANIYEVFS 223
++ V + K++P++N I ++C + P Q L E++K AN+YE FS
Sbjct: 315 LSSVSLPLAKIIPIVNGQI-HSVC---SETPSHFVQDLLTMEQVKDFAANVYEAFS 366
>BC015506-1|AAH15506.1| 373|Homo sapiens peroxisomal biogenesis
factor 3 protein.
Length = 373
Score = 32.3 bits (70), Expect = 1.9
Identities = 17/56 (30%), Positives = 30/56 (53%)
Frame = -3
Query: 390 VNKVEIYFVKLLPVINDLITKNMCKGDNNIPDLLTQQLTLNEKLKLLGANIYEVFS 223
++ V + K++P++N I ++C + P Q L E++K AN+YE FS
Sbjct: 315 LSSVSLPLAKIIPIVNGQI-HSVC---SETPSHFVQDLLTMEQVKDFAANVYEAFS 366
>BC014551-1|AAH14551.1| 373|Homo sapiens peroxisomal biogenesis
factor 3 protein.
Length = 373
Score = 32.3 bits (70), Expect = 1.9
Identities = 17/56 (30%), Positives = 30/56 (53%)
Frame = -3
Query: 390 VNKVEIYFVKLLPVINDLITKNMCKGDNNIPDLLTQQLTLNEKLKLLGANIYEVFS 223
++ V + K++P++N I ++C + P Q L E++K AN+YE FS
Sbjct: 315 LSSVSLPLAKIIPIVNGQI-HSVC---SETPSHFVQDLLTMEQVKDFAANVYEAFS 366
>AY277600-1|AAQ18039.1| 373|Homo sapiens transformation-related
protein 18 protein.
Length = 373
Score = 32.3 bits (70), Expect = 1.9
Identities = 17/56 (30%), Positives = 30/56 (53%)
Frame = -3
Query: 390 VNKVEIYFVKLLPVINDLITKNMCKGDNNIPDLLTQQLTLNEKLKLLGANIYEVFS 223
++ V + K++P++N I ++C + P Q L E++K AN+YE FS
Sbjct: 315 LSSVSLPLAKIIPIVNGQI-HSVC---SETPSHFVQDLLTMEQVKDFAANVYEAFS 366
>AL031320-5|CAB53744.1| 373|Homo sapiens peroxisomal biogenesis
factor 3 protein.
Length = 373
Score = 32.3 bits (70), Expect = 1.9
Identities = 17/56 (30%), Positives = 30/56 (53%)
Frame = -3
Query: 390 VNKVEIYFVKLLPVINDLITKNMCKGDNNIPDLLTQQLTLNEKLKLLGANIYEVFS 223
++ V + K++P++N I ++C + P Q L E++K AN+YE FS
Sbjct: 315 LSSVSLPLAKIIPIVNGQI-HSVC---SETPSHFVQDLLTMEQVKDFAANVYEAFS 366
>AJ131389-1|CAA10362.1| 373|Homo sapiens PEX3 protein protein.
Length = 373
Score = 32.3 bits (70), Expect = 1.9
Identities = 17/56 (30%), Positives = 30/56 (53%)
Frame = -3
Query: 390 VNKVEIYFVKLLPVINDLITKNMCKGDNNIPDLLTQQLTLNEKLKLLGANIYEVFS 223
++ V + K++P++N I ++C + P Q L E++K AN+YE FS
Sbjct: 315 LSSVSLPLAKIIPIVNGQI-HSVC---SETPSHFVQDLLTMEQVKDFAANVYEAFS 366
>AJ009866-1|CAA08904.1| 373|Homo sapiens Pex3p protein.
Length = 373
Score = 32.3 bits (70), Expect = 1.9
Identities = 17/56 (30%), Positives = 30/56 (53%)
Frame = -3
Query: 390 VNKVEIYFVKLLPVINDLITKNMCKGDNNIPDLLTQQLTLNEKLKLLGANIYEVFS 223
++ V + K++P++N I ++C + P Q L E++K AN+YE FS
Sbjct: 315 LSSVSLPLAKIIPIVNGQI-HSVC---SETPSHFVQDLLTMEQVKDFAANVYEAFS 366
>AJ001625-1|CAA04879.1| 373|Homo sapiens Pex3 protein protein.
Length = 373
Score = 32.3 bits (70), Expect = 1.9
Identities = 17/56 (30%), Positives = 30/56 (53%)
Frame = -3
Query: 390 VNKVEIYFVKLLPVINDLITKNMCKGDNNIPDLLTQQLTLNEKLKLLGANIYEVFS 223
++ V + K++P++N I ++C + P Q L E++K AN+YE FS
Sbjct: 315 LSSVSLPLAKIIPIVNGQI-HSVC---SETPSHFVQDLLTMEQVKDFAANVYEAFS 366
>AB035307-1|BAA97993.1| 373|Homo sapiens Pex3p protein.
Length = 373
Score = 32.3 bits (70), Expect = 1.9
Identities = 17/56 (30%), Positives = 30/56 (53%)
Frame = -3
Query: 390 VNKVEIYFVKLLPVINDLITKNMCKGDNNIPDLLTQQLTLNEKLKLLGANIYEVFS 223
++ V + K++P++N I ++C + P Q L E++K AN+YE FS
Sbjct: 315 LSSVSLPLAKIIPIVNGQI-HSVC---SETPSHFVQDLLTMEQVKDFAANVYEAFS 366
>AB209996-1|BAE06078.1| 2585|Homo sapiens CENPE variant protein
protein.
Length = 2585
Score = 31.5 bits (68), Expect = 3.3
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = -3
Query: 435 ITSGVLKLKSEPFVDVNKVEIYFVKLLPVINDLITK-NMCKGDNNIPDLLTQQLTLNEKL 259
+ S V K+K E +NK E+ F+ + +L+ K + D ++P + L LN+ +
Sbjct: 2060 VLSYVTKIKEEQHESINKFEMDFIDEVEKQKELLIKIQHLQQDCDVPSRELRDLKLNQNM 2119
Query: 258 KLLGANIYEVFSNS 217
L I + FS S
Sbjct: 2120 DLHIEEILKDFSES 2133
>AB065639-1|BAC05865.1| 251|Homo sapiens seven transmembrane helix
receptor protein.
Length = 251
Score = 30.7 bits (66), Expect = 5.8
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = -2
Query: 220 FIIKYMLDISC*NIIAALIYQFQYKLCIPLYSXQGILSVPQNFTFVTLIXTAMX*RFFEL 41
F+ Y++ +S NII + + L P+Y GILS+ + F + T+I M F +
Sbjct: 29 FLCLYLIILSG-NIIIISVIHLDHSLHTPMYFFLGILSISEIF-YTTVILPKMLINLFSV 86
Query: 40 -XILRMVICDLKMW 2
L V C +M+
Sbjct: 87 FRTLSFVSCATQMF 100
>Z15005-1|CAA78727.1| 2663|Homo sapiens CENP-E protein.
Length = 2663
Score = 30.3 bits (65), Expect = 7.7
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = -3
Query: 435 ITSGVLKLKSEPFVDVNKVEIYFVKLLPVINDLITK-NMCKGDNNIPDLLTQQLTLNEKL 259
+ S V K+K E +NK E+ F+ + +L+ K + D ++P + L LN+ +
Sbjct: 2138 VLSYVTKIKEEQHECINKFEMDFIDEVEKQKELLIKIQHLQQDCDVPSRELRDLKLNQNM 2197
Query: 258 KLLGANIYEVFSNS 217
L I + FS S
Sbjct: 2198 DLHIEEILKDFSES 2211
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,540,782
Number of Sequences: 237096
Number of extensions: 1650332
Number of successful extensions: 2018
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1980
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2016
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8959138240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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