Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_E15
         (746 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73970-2|CAA98243.2| 1560|Caenorhabditis elegans Hypothetical pr...    31   0.87 
U53154-3|AAC25852.1|  346|Caenorhabditis elegans Hypothetical pr...    30   2.0  
Z71178-6|CAA94880.2| 1185|Caenorhabditis elegans Hypothetical pr...    29   3.5  
AF067949-3|ABD94092.1|  130|Caenorhabditis elegans Hypothetical ...    29   4.6  
Z92796-6|CAB63232.1|  405|Caenorhabditis elegans Hypothetical pr...    28   8.1  

>Z73970-2|CAA98243.2| 1560|Caenorhabditis elegans Hypothetical protein
            C29A12.4 protein.
          Length = 1560

 Score = 31.1 bits (67), Expect = 0.87
 Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
 Frame = -3

Query: 510  DEVANLFVTKSIPPSKNQLEVEDHVITSGVLKLKSEPFVDVNKVEIYFVKLLPVINDLIT 331
            DE+A + +  SI  + N+  +E    +   L+ +   F+D +    +F  +LP + +  T
Sbjct: 1322 DELAEMMMAHSIDENPNEALIESLAPSCLSLEEQQSCFIDTDDSTGFFSPVLPTVANFPT 1381

Query: 330  KNMCKG-DNNIPDLLTQQL 277
                +  DN +  L+T  L
Sbjct: 1382 TRQTEHIDNEVTALITSSL 1400


>U53154-3|AAC25852.1|  346|Caenorhabditis elegans Hypothetical
           protein C33G8.8 protein.
          Length = 346

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
 Frame = -3

Query: 435 ITSGVLKLKSEPFVDVNKVEIYFVKLLPVINDLITKNMCKGDNNIPDLLTQQLTLNEKLK 256
           I +G+   K +   + NKV  Y+   LPVI+ L T  + K  +NI   +   + L++  K
Sbjct: 61  IATGMTMCKVQGNREKNKVRGYYPGYLPVISTLPTSVIPKSCDNILRTVANWVDLDQTRK 120

Query: 255 -LLGANIYE 232
            L G N ++
Sbjct: 121 QLRGENFFD 129


>Z71178-6|CAA94880.2| 1185|Caenorhabditis elegans Hypothetical
           protein B0024.8 protein.
          Length = 1185

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 13/49 (26%), Positives = 27/49 (55%)
 Frame = +2

Query: 185 LTTNI*HVLNYELLNTS*MFAPNSFNFSLSVSCCVNKSGMLLSPLHMFL 331
           L T + H+L  EL+ ++      +F    ++  C +++G+L+  LH F+
Sbjct: 159 LITELHHILIPELVKSNWTCLVENFTTESNIQGCEDQAGVLMKKLHYFI 207


>AF067949-3|ABD94092.1|  130|Caenorhabditis elegans Hypothetical
           protein T10H9.8 protein.
          Length = 130

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = +2

Query: 479 DLVTNKFATSSMTHEKLLLTDDIVTEITSSLSKMSIVSLTIVS-NFES 619
           D++TN+F    M H  L+ T +I     S  +KMS   +  +  NF S
Sbjct: 32  DVITNEFKARDMDHNGLVTTKEIREYYESHPNKMSKEGIEFIDRNFHS 79


>Z92796-6|CAB63232.1|  405|Caenorhabditis elegans Hypothetical
           protein H25K10.7 protein.
          Length = 405

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 16/54 (29%), Positives = 28/54 (51%)
 Frame = +2

Query: 203 HVLNYELLNTS*MFAPNSFNFSLSVSCCVNKSGMLLSPLHMFLVIRSLITGNNL 364
           H  N EL + S  F     NFS    C  + SG+L++ +H+ ++ R  +  N++
Sbjct: 15  HPDNAELKSFS-DFLTKINNFSSKYQCVFSCSGLLINLVHLIIITRKSLRVNSV 67


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,941,617
Number of Sequences: 27780
Number of extensions: 288649
Number of successful extensions: 557
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 544
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 557
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)