Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_pT_E12
(726 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 23 2.9
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 23 2.9
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 23 2.9
AY263366-1|AAO92605.1| 139|Apis mellifera octopamine receptor p... 22 5.1
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 22 5.1
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 22 6.8
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 22 6.8
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 22 6.8
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 22 6.8
DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex det... 22 6.8
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 22 6.8
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 21 9.0
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.0 bits (47), Expect = 2.9
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -1
Query: 522 HRLCLTLRSNIFLGGNRNYKSIICN 448
H++ +L SN + N NYK + CN
Sbjct: 79 HKIISSL-SNNYNYNNNNYKKLYCN 102
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.0 bits (47), Expect = 2.9
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -1
Query: 522 HRLCLTLRSNIFLGGNRNYKSIICN 448
H++ +L SN + N NYK + CN
Sbjct: 79 HKIISSL-SNNYNYNNNNYKKLYCN 102
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.0 bits (47), Expect = 2.9
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -1
Query: 522 HRLCLTLRSNIFLGGNRNYKSIICN 448
H++ +L SN + N NYK + CN
Sbjct: 79 HKIISSL-SNNYNYNNNNYKKLYCN 102
>AY263366-1|AAO92605.1| 139|Apis mellifera octopamine receptor
protein.
Length = 139
Score = 22.2 bits (45), Expect = 5.1
Identities = 7/14 (50%), Positives = 12/14 (85%)
Frame = -1
Query: 93 MIFFICLCNSSINP 52
++F++ CNS+INP
Sbjct: 46 VLFWLGYCNSAINP 59
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 22.2 bits (45), Expect = 5.1
Identities = 7/14 (50%), Positives = 12/14 (85%)
Frame = -1
Query: 93 MIFFICLCNSSINP 52
++F++ CNS+INP
Sbjct: 494 VLFWLGYCNSAINP 507
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 6.8
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = -1
Query: 576 ICMINWNYNFIYTNSNCFHRLCLTL 502
I ++ NYN+ N+N + +LC +
Sbjct: 82 ISSLSNNYNYSNYNNNNYKQLCYNI 106
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 6.8
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = -1
Query: 576 ICMINWNYNFIYTNSNCFHRLCLTL 502
I ++ NYN+ N+N + +LC +
Sbjct: 82 ISSLSNNYNYSNYNNNNYKQLCYNI 106
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 6.8
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = -1
Query: 576 ICMINWNYNFIYTNSNCFHRLCLTL 502
I ++ NYN+ N+N + +LC +
Sbjct: 82 ISSLSNNYNYSNYNNNNYKQLCYNI 106
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 6.8
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = -1
Query: 576 ICMINWNYNFIYTNSNCFHRLCLTL 502
I ++ NYN+ N+N + +LC +
Sbjct: 82 ISSLSNNYNYSNYNNNNYKQLCYNI 106
>DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 6.8
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = -1
Query: 576 ICMINWNYNFIYTNSNCFHRLCLTL 502
I ++ NYN+ N+N + +LC +
Sbjct: 82 ISSLSNNYNYSNYNNNNYKQLCYNI 106
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 6.8
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = -1
Query: 576 ICMINWNYNFIYTNSNCFHRLCLTL 502
I ++ NYN+ N+N + +LC +
Sbjct: 82 ISSLSNNYNYSNYNNNNYKQLCYNI 106
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 21.4 bits (43), Expect = 9.0
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +1
Query: 256 LSKFLFNPKGLLDPVW 303
L + F+ +GLL PVW
Sbjct: 213 LEELGFDTEGLLPPVW 228
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,235
Number of Sequences: 438
Number of extensions: 3002
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22535775
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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