Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_E11
         (798 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl s...    26   1.6  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    26   1.6  
AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR prot...    25   2.7  
DQ230893-2|ABD94312.1|  525|Anopheles gambiae iduronate 2-sulfat...    24   6.3  
AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering In...    24   6.3  
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    23   8.3  

>AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl
            symporter protein.
          Length = 1127

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
 Frame = -1

Query: 612  VSTILIIRWLEMISKHEGPWLFGRTRMT--LTF 520
            VS  L + WLE +S+   P+LF R   T  LTF
Sbjct: 1093 VSAPLYMAWLEALSRDLPPFLFVRGNQTSVLTF 1125


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -1

Query: 411 PGTAFLPKPDVDVGVVTLTPLKHPIIK 331
           P T F P+P  +V  V   PLK P ++
Sbjct: 110 PTTRFAPEPRAEVKFVPSVPLKTPPVR 136


>AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR
           protein.
          Length = 460

 Score = 25.0 bits (52), Expect = 2.7
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = -2

Query: 326 HLNLLRKLSVKYFQ*DKSIRYGVLRRCS 243
           +L + R+LS +YF    + R G+LRR S
Sbjct: 249 NLEIRRQLSFQYFSTHPNGRNGILRRSS 276


>DQ230893-2|ABD94312.1|  525|Anopheles gambiae iduronate 2-sulfatase
           precursor protein.
          Length = 525

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 10/35 (28%), Positives = 15/35 (42%)
 Frame = -1

Query: 717 DILXTDLSQFIPSDAKVHWLDPPPPVHLIGNLPFS 613
           D    D S     +   HW+DP   ++LI   P +
Sbjct: 476 DYFKRDWSTIYGEELYDHWIDPQENMNLIDRAPLA 510


>AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering
           Institute proto-oncogeneproduct protein.
          Length = 358

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -1

Query: 414 IPGTAFLPKPDVDVGVVTLTPLK 346
           +PG   +  PD D G++ +T L+
Sbjct: 98  VPGVPIMTTPDPDCGILHMTMLE 120


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = +3

Query: 435 CTKIDT*LITCTFAYLRYGQPFSLQLLFEK 524
           C+ I      C  + LRYG P    +L EK
Sbjct: 808 CSSIRRLHANCAISVLRYGAPVWAHILKEK 837


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 881,426
Number of Sequences: 2352
Number of extensions: 20771
Number of successful extensions: 37
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 83992206
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)