BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_pT_E11
(798 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC017788-1|AAH17788.1| 346|Homo sapiens transcription factor B1... 251 2e-66
AL139101-2|CAI20506.1| 346|Homo sapiens transcription factor B1... 251 2e-66
AF151833-1|AAD34070.1| 346|Homo sapiens CGI-75 protein protein. 251 2e-66
BC005183-1|AAH05183.1| 341|Homo sapiens Unknown (protein for IM... 250 6e-66
BC010874-1|AAH10874.1| 313|Homo sapiens DIM1 dimethyladenosine ... 48 3e-05
BC002841-1|AAH02841.1| 275|Homo sapiens DIMT1L protein protein. 48 3e-05
AF102147-1|AAC97955.1| 313|Homo sapiens putative dimethyladenos... 48 3e-05
AJ009761-1|CAA08815.1| 157|Homo sapiens putative dimethyladenos... 37 0.097
U08023-1|AAB60430.1| 999|Homo sapiens c-mer protein. 31 4.8
BC114918-1|AAI14919.1| 823|Homo sapiens MERTK protein protein. 31 4.8
BC114917-1|AAI14918.1| 823|Homo sapiens MERTK protein protein. 31 4.8
AF260529-1|AAG33129.1| 978|Homo sapiens MER receptor tyrosine k... 31 4.8
AC093675-1|AAY24213.1| 567|Homo sapiens unknown protein. 31 4.8
>BC017788-1|AAH17788.1| 346|Homo sapiens transcription factor B1,
mitochondrial protein.
Length = 346
Score = 251 bits (615), Expect = 2e-66
Identities = 125/252 (49%), Positives = 164/252 (65%)
Frame = -1
Query: 795 DPRFLPSLELLADACRDKVDVDIITGDILXTDLSQFIPSDAKVHWLDPPPPVHLIGNLPF 616
D RF+P L++L+DA K+ I+ GD+L + + K W D PP VH+IGNLPF
Sbjct: 87 DTRFIPGLQMLSDAAPGKLR--IVHGDVLTFKVEKAFSESLKRPWEDDPPNVHIIGNLPF 144
Query: 615 SVSTILIIRWLEMISKHEGPWLFGRTRMTLTFQKEVAERMAARILDKQRCRLSVMCQSWC 436
SVST LII+WLE IS +GP+++GRT+MTLTFQKEVAER+AA KQR RLSVM Q C
Sbjct: 145 SVSTPLIIKWLENISCRDGPFVYGRTQMTLTFQKEVAERLAANTGSKQRSRLSVMAQYLC 204
Query: 435 TVKYNFDIPGTAFLPKPDVDVGVVTLTPLKHPIIKLPFKLAEKVVRQIFSMRQKYSIRGA 256
V++ F IPG AF+PKP+VDVGVV TPL P I+ PFKL EKVV+ +F R+KY RG
Sbjct: 205 NVRHIFTIPGQAFVPKPEVDVGVVHFTPLIQPKIEQPFKLVEKVVQNVFQFRRKYCHRGL 264
Query: 255 QTLFPEEVREEVALKMYNIADIDPVTRPFQITNMEFARLCEAYNDIIKQHPEFEHYDYRA 76
+ LFPE R E ++ +ADIDP RP Q++ F LC+ Y + + P+ Y++R
Sbjct: 265 RMLFPEAQRLESTGRLLELADIDPTLRPRQLSISHFKSLCDVYRKMCDEDPQLFAYNFRE 324
Query: 75 PKNKNNLINAEE 40
+ N E+
Sbjct: 325 ELKRRKSKNEEK 336
>AL139101-2|CAI20506.1| 346|Homo sapiens transcription factor B1,
mitochondrial protein.
Length = 346
Score = 251 bits (615), Expect = 2e-66
Identities = 125/252 (49%), Positives = 164/252 (65%)
Frame = -1
Query: 795 DPRFLPSLELLADACRDKVDVDIITGDILXTDLSQFIPSDAKVHWLDPPPPVHLIGNLPF 616
D RF+P L++L+DA K+ I+ GD+L + + K W D PP VH+IGNLPF
Sbjct: 87 DTRFIPGLQMLSDAAPGKLR--IVHGDVLTFKVEKAFSESLKRPWEDDPPNVHIIGNLPF 144
Query: 615 SVSTILIIRWLEMISKHEGPWLFGRTRMTLTFQKEVAERMAARILDKQRCRLSVMCQSWC 436
SVST LII+WLE IS +GP+++GRT+MTLTFQKEVAER+AA KQR RLSVM Q C
Sbjct: 145 SVSTPLIIKWLENISCRDGPFVYGRTQMTLTFQKEVAERLAANTGSKQRSRLSVMAQYLC 204
Query: 435 TVKYNFDIPGTAFLPKPDVDVGVVTLTPLKHPIIKLPFKLAEKVVRQIFSMRQKYSIRGA 256
V++ F IPG AF+PKP+VDVGVV TPL P I+ PFKL EKVV+ +F R+KY RG
Sbjct: 205 NVRHIFTIPGQAFVPKPEVDVGVVHFTPLIQPKIEQPFKLVEKVVQNVFQFRRKYCHRGL 264
Query: 255 QTLFPEEVREEVALKMYNIADIDPVTRPFQITNMEFARLCEAYNDIIKQHPEFEHYDYRA 76
+ LFPE R E ++ +ADIDP RP Q++ F LC+ Y + + P+ Y++R
Sbjct: 265 RMLFPEAQRLESTGRLLELADIDPTLRPRQLSISHFKSLCDVYRKMCDEDPQLFAYNFRE 324
Query: 75 PKNKNNLINAEE 40
+ N E+
Sbjct: 325 ELKRRKSKNEEK 336
>AF151833-1|AAD34070.1| 346|Homo sapiens CGI-75 protein protein.
Length = 346
Score = 251 bits (615), Expect = 2e-66
Identities = 125/252 (49%), Positives = 164/252 (65%)
Frame = -1
Query: 795 DPRFLPSLELLADACRDKVDVDIITGDILXTDLSQFIPSDAKVHWLDPPPPVHLIGNLPF 616
D RF+P L++L+DA K+ I+ GD+L + + K W D PP VH+IGNLPF
Sbjct: 87 DTRFIPGLQMLSDAAPGKLR--IVHGDVLTFKVEKAFSESLKRPWEDDPPNVHIIGNLPF 144
Query: 615 SVSTILIIRWLEMISKHEGPWLFGRTRMTLTFQKEVAERMAARILDKQRCRLSVMCQSWC 436
SVST LII+WLE IS +GP+++GRT+MTLTFQKEVAER+AA KQR RLSVM Q C
Sbjct: 145 SVSTPLIIKWLENISCRDGPFVYGRTQMTLTFQKEVAERLAANTGSKQRSRLSVMAQYLC 204
Query: 435 TVKYNFDIPGTAFLPKPDVDVGVVTLTPLKHPIIKLPFKLAEKVVRQIFSMRQKYSIRGA 256
V++ F IPG AF+PKP+VDVGVV TPL P I+ PFKL EKVV+ +F R+KY RG
Sbjct: 205 NVRHIFTIPGQAFVPKPEVDVGVVHFTPLIQPKIEQPFKLVEKVVQNVFQFRRKYCHRGL 264
Query: 255 QTLFPEEVREEVALKMYNIADIDPVTRPFQITNMEFARLCEAYNDIIKQHPEFEHYDYRA 76
+ LFPE R E ++ +ADIDP RP Q++ F LC+ Y + + P+ Y++R
Sbjct: 265 RMLFPEAQRLESTGRLLELADIDPTLRPRQLSISHFKSLCDVYRKMCDEDPQLFAYNFRE 324
Query: 75 PKNKNNLINAEE 40
+ N E+
Sbjct: 325 ELKRRKSKNEEK 336
>BC005183-1|AAH05183.1| 341|Homo sapiens Unknown (protein for
IMAGE:4041141) protein.
Length = 341
Score = 250 bits (611), Expect = 6e-66
Identities = 123/239 (51%), Positives = 160/239 (66%)
Frame = -1
Query: 795 DPRFLPSLELLADACRDKVDVDIITGDILXTDLSQFIPSDAKVHWLDPPPPVHLIGNLPF 616
D RF+P L++L+DA K+ I+ GD+L + + K W D PP VH+IGNLPF
Sbjct: 87 DTRFIPGLQMLSDAAPGKLR--IVHGDVLTFKVEKAFSESLKRPWEDDPPNVHIIGNLPF 144
Query: 615 SVSTILIIRWLEMISKHEGPWLFGRTRMTLTFQKEVAERMAARILDKQRCRLSVMCQSWC 436
SVST LII+WLE IS +GP+++GRT+MTLTFQKEVAER+AA KQR RLSVM Q C
Sbjct: 145 SVSTPLIIKWLENISCRDGPFVYGRTQMTLTFQKEVAERLAANTGSKQRSRLSVMAQYLC 204
Query: 435 TVKYNFDIPGTAFLPKPDVDVGVVTLTPLKHPIIKLPFKLAEKVVRQIFSMRQKYSIRGA 256
V++ F IPG AF+PKP+VDVGVV TPL P I+ PFKL EKVV+ +F R+KY RG
Sbjct: 205 NVRHIFTIPGQAFVPKPEVDVGVVHFTPLIQPKIEQPFKLVEKVVQNVFQFRRKYCHRGL 264
Query: 255 QTLFPEEVREEVALKMYNIADIDPVTRPFQITNMEFARLCEAYNDIIKQHPEFEHYDYR 79
+ LFPE R E ++ +ADIDP RP Q++ F LC+ Y + + P+ Y++R
Sbjct: 265 RMLFPEAQRLESTGRLLELADIDPTLRPRQLSISHFKSLCDVYRKMCDEDPQLFAYNFR 323
>BC010874-1|AAH10874.1| 313|Homo sapiens DIM1 dimethyladenosine
transferase 1-like (S. cerevisiae) protein.
Length = 313
Score = 48.4 bits (110), Expect = 3e-05
Identities = 49/174 (28%), Positives = 75/174 (43%)
Frame = -1
Query: 795 DPRFLPSLELLADACRDKVDVDIITGDILXTDLSQFIPSDAKVHWLDPPPPVHLIGNLPF 616
DPR + L + ++ GD+L TDL F D + NLP+
Sbjct: 87 DPRLVAELHKRVQGTPVASKLQVLVGDVLKTDLPFF---DT------------CVANLPY 131
Query: 615 SVSTILIIRWLEMISKHEGPWLFGRTRMTLTFQKEVAERMAARILDKQRCRLSVMCQSWC 436
+S+ + + L H F R + L FQ+E A R+ A+ DK CRLS+ Q
Sbjct: 132 QISSPFVFKLL----LHRP---FFRCAI-LMFQREFALRLVAKPGDKLYCRLSINTQLLA 183
Query: 435 TVKYNFDIPGTAFLPKPDVDVGVVTLTPLKHPIIKLPFKLAEKVVRQIFSMRQK 274
V + + F P P V+ VV + P K+P + F+ + +VR F + K
Sbjct: 184 RVDHLMKVGKNNFRPPPKVESSVVRIEP-KNPPPPINFQEWDGLVRITFVRKNK 236
>BC002841-1|AAH02841.1| 275|Homo sapiens DIMT1L protein protein.
Length = 275
Score = 48.4 bits (110), Expect = 3e-05
Identities = 49/174 (28%), Positives = 75/174 (43%)
Frame = -1
Query: 795 DPRFLPSLELLADACRDKVDVDIITGDILXTDLSQFIPSDAKVHWLDPPPPVHLIGNLPF 616
DPR + L + ++ GD+L TDL F D + NLP+
Sbjct: 87 DPRLVAELHKRVQGTPVASKLQVLVGDVLKTDLPFF---DT------------CVANLPY 131
Query: 615 SVSTILIIRWLEMISKHEGPWLFGRTRMTLTFQKEVAERMAARILDKQRCRLSVMCQSWC 436
+S+ + + L H F R + L FQ+E A R+ A+ DK CRLS+ Q
Sbjct: 132 QISSPFVFKLL----LHRP---FFRCAI-LMFQREFALRLVAKPGDKLYCRLSINTQLLA 183
Query: 435 TVKYNFDIPGTAFLPKPDVDVGVVTLTPLKHPIIKLPFKLAEKVVRQIFSMRQK 274
V + + F P P V+ VV + P K+P + F+ + +VR F + K
Sbjct: 184 RVDHLMKVGKNNFRPPPKVESSVVRIEP-KNPPPPINFQEWDGLVRITFVRKNK 236
>AF102147-1|AAC97955.1| 313|Homo sapiens putative dimethyladenosine
transferase protein.
Length = 313
Score = 48.4 bits (110), Expect = 3e-05
Identities = 49/174 (28%), Positives = 75/174 (43%)
Frame = -1
Query: 795 DPRFLPSLELLADACRDKVDVDIITGDILXTDLSQFIPSDAKVHWLDPPPPVHLIGNLPF 616
DPR + L + ++ GD+L TDL F D + NLP+
Sbjct: 87 DPRLVAELHKRVQGTPVASKLQVLVGDVLKTDLPFF---DT------------CVANLPY 131
Query: 615 SVSTILIIRWLEMISKHEGPWLFGRTRMTLTFQKEVAERMAARILDKQRCRLSVMCQSWC 436
+S+ + + L H F R + L FQ+E A R+ A+ DK CRLS+ Q
Sbjct: 132 QISSPFVFKLL----LHRP---FFRCAI-LMFQREFALRLVAKPGDKLYCRLSINTQLLA 183
Query: 435 TVKYNFDIPGTAFLPKPDVDVGVVTLTPLKHPIIKLPFKLAEKVVRQIFSMRQK 274
V + + F P P V+ VV + P K+P + F+ + +VR F + K
Sbjct: 184 RVDHLMKVGKNNFRPPPKVESSVVRIEP-KNPPPPINFQEWDGLVRITFVRKNK 236
>AJ009761-1|CAA08815.1| 157|Homo sapiens putative dimethyladenosine
transferase protein.
Length = 157
Score = 36.7 bits (81), Expect = 0.097
Identities = 25/78 (32%), Positives = 38/78 (48%)
Frame = -1
Query: 507 AERMAARILDKQRCRLSVMCQSWCTVKYNFDIPGTAFLPKPDVDVGVVTLTPLKHPIIKL 328
A R+ A+ DK CRLS+ Q V + + F P P V+ VV + P K+P +
Sbjct: 4 ALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESSVVRIEP-KNPPPPI 62
Query: 327 PFKLAEKVVRQIFSMRQK 274
F+ + +VR F + K
Sbjct: 63 NFQEWDGLVRITFVRKNK 80
>U08023-1|AAB60430.1| 999|Homo sapiens c-mer protein.
Length = 999
Score = 31.1 bits (67), Expect = 4.8
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = -1
Query: 273 YSIRGAQTLFPEEVREEVALKMYNIADIDPVTRP-FQITNMEFARLCEAYNDIIKQ 109
Y + G + PE+ +E+ MY+ DP+ RP F + ++ +L E+ D+ Q
Sbjct: 812 YLLHGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESLPDVRNQ 867
>BC114918-1|AAI14919.1| 823|Homo sapiens MERTK protein protein.
Length = 823
Score = 31.1 bits (67), Expect = 4.8
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = -1
Query: 273 YSIRGAQTLFPEEVREEVALKMYNIADIDPVTRP-FQITNMEFARLCEAYNDIIKQ 109
Y + G + PE+ +E+ MY+ DP+ RP F + ++ +L E+ D+ Q
Sbjct: 636 YLLHGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESLPDVRNQ 691
>BC114917-1|AAI14918.1| 823|Homo sapiens MERTK protein protein.
Length = 823
Score = 31.1 bits (67), Expect = 4.8
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = -1
Query: 273 YSIRGAQTLFPEEVREEVALKMYNIADIDPVTRP-FQITNMEFARLCEAYNDIIKQ 109
Y + G + PE+ +E+ MY+ DP+ RP F + ++ +L E+ D+ Q
Sbjct: 636 YLLHGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESLPDVRNQ 691
>AF260529-1|AAG33129.1| 978|Homo sapiens MER receptor tyrosine
kinase protein.
Length = 978
Score = 31.1 bits (67), Expect = 4.8
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = -1
Query: 273 YSIRGAQTLFPEEVREEVALKMYNIADIDPVTRP-FQITNMEFARLCEAYNDIIKQ 109
Y + G + PE+ +E+ MY+ DP+ RP F + ++ +L E+ D+ Q
Sbjct: 791 YLLHGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESLPDVRNQ 846
>AC093675-1|AAY24213.1| 567|Homo sapiens unknown protein.
Length = 567
Score = 31.1 bits (67), Expect = 4.8
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = -1
Query: 273 YSIRGAQTLFPEEVREEVALKMYNIADIDPVTRP-FQITNMEFARLCEAYNDIIKQ 109
Y + G + PE+ +E+ MY+ DP+ RP F + ++ +L E+ D+ Q
Sbjct: 380 YLLHGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESLPDVRNQ 435
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,537,047
Number of Sequences: 237096
Number of extensions: 2682743
Number of successful extensions: 5472
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 5253
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5472
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9813323168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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