Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_pT_E10
(703 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces... 44 2e-05
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 36 0.007
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 35 0.010
SPBC11C11.02 |imp2||contractile ring protein Imp2|Schizosaccharo... 35 0.010
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos... 35 0.013
SPAC3C7.10 |pex13||peroxin-13|Schizosaccharomyces pombe|chr 1|||... 33 0.052
SPBC1289.04c |pob1||Boi family protein|Schizosaccharomyces pombe... 32 0.091
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 32 0.091
SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein ... 30 0.37
SPBC12C2.05c |||diacylglycerol binding protein Bzz1 |Schizosacch... 28 1.1
SPAC110.02 |pds5||cohesin-associated protein Pds5|Schizosaccharo... 28 1.5
SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1 |Sc... 25 7.9
>SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 44.0 bits (99), Expect = 2e-05
Identities = 22/56 (39%), Positives = 33/56 (58%)
Frame = -1
Query: 475 VYAVFSYTAARSDELSFETGTRLQVLRKGDDNEREWWWCRDDNGQEGYVPRNLLGL 308
V A++ Y A + +LSF G R++V+ + DN+ EWW R NG +G P N + L
Sbjct: 412 VVALYDYAAQAAGDLSFHAGDRIEVVSR-TDNQNEWWIGR-LNGAQGQFPGNYVQL 465
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 35.5 bits (78), Expect = 0.007
Identities = 17/64 (26%), Positives = 32/64 (50%)
Frame = -1
Query: 478 LVYAVFSYTAARSDELSFETGTRLQVLRKGDDNEREWWWCRDDNGQEGYVPRNLLGLYRR 299
L A++ + +E++ + +++++K E WW NG EG+VP + Y+
Sbjct: 1110 LYLALYDFAGRSPNEMTIKKDEIIEIVQK----EPSGWWLALKNGAEGWVPATYVTEYKG 1165
Query: 298 VTPQ 287
TPQ
Sbjct: 1166 STPQ 1169
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 35.1 bits (77), Expect = 0.010
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = -1
Query: 466 VFSYTAARSDELSFETGTRLQVLRKGDDNEREWWWCRDDNGQEGYVPRNLL 314
++ + A +DEL+ + R+ ++ D +WW C D G+EG VP N +
Sbjct: 516 LYDFIAEAADELTVKANMRVVIVN--DTASSDWWKCSVD-GKEGVVPSNFI 563
>SPBC11C11.02 |imp2||contractile ring protein
Imp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 670
Score = 35.1 bits (77), Expect = 0.010
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = -1
Query: 481 GLVYAVFSYTAARSDELSFETGTRLQVLRKGDDNEREWWWCRDDNGQEGYVPRNLL 314
G V A++ Y AA +E+SF G + VL+ +D E + +D+ G P N +
Sbjct: 610 GYVSALYDYDAAIPEEISFRKGDTIAVLKLYEDGWWEGFVVGEDDHNRGQFPSNFV 665
>SPAC20G8.05c |cdc15||cell division control protein
Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 927
Score = 34.7 bits (76), Expect = 0.013
Identities = 21/59 (35%), Positives = 31/59 (52%)
Frame = -1
Query: 481 GLVYAVFSYTAARSDELSFETGTRLQVLRKGDDNEREWWWCRDDNGQEGYVPRNLLGLY 305
G V A++ Y A +E+SF+ G L VLR +D WW +G+ VP + GL+
Sbjct: 869 GYVIALYDYQAQIPEEISFQKGDTLMVLRTQEDG---WW-----DGEIINVPNSKRGLF 919
>SPAC3C7.10 |pex13||peroxin-13|Schizosaccharomyces pombe|chr
1|||Manual
Length = 288
Score = 32.7 bits (71), Expect = 0.052
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = -1
Query: 436 ELSFETGTRLQVLRKGDD--NEREWWWCRDDNGQEGYVPRNLLGLYRR 299
E+S + G + +L K D N EWW R +G+ G+ P N + R
Sbjct: 241 EMSLKKGDIIAILSKTDTQGNPCEWWQGRKRSGETGWFPSNYCSIISR 288
>SPBC1289.04c |pob1||Boi family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 871
Score = 31.9 bits (69), Expect = 0.091
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = -1
Query: 475 VYAVFSYTAARSDELSFETGTRLQVLRKGDDNEREWWWCRDDNGQEGYVP 326
V A+ S+ SDEL G + +++ ++ WW D+ G G P
Sbjct: 7 VIALHSFPGKSSDELPLVEGRKYLLIKMDEEFGDGWWEGEDEQGNRGIFP 56
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 31.9 bits (69), Expect = 0.091
Identities = 13/49 (26%), Positives = 23/49 (46%)
Frame = -1
Query: 466 VFSYTAARSDELSFETGTRLQVLRKGDDNEREWWWCRDDNGQEGYVPRN 320
++ Y+ +E+ ++Q+L DD WW + GQ+G P N
Sbjct: 733 IYDYSPEEENEIELVENEQIQILEFVDDG---WWLGENSKGQQGLFPSN 778
>SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein
Lsb1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 296
Score = 29.9 bits (64), Expect = 0.37
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = -1
Query: 475 VYAVFSYTAARSDELSFETGTRLQVLRKGDDNEREWWWCRDDNGQEGYVPRNLLGL 308
V A++ + + +L F G + VL +++ WW + NG+EG P N + L
Sbjct: 145 VLAMYDFPGPDAGDLGFHAGEVIIVLEHVNND----WWRGELNGKEGIFPSNYVRL 196
>SPBC12C2.05c |||diacylglycerol binding protein Bzz1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 28.3 bits (60), Expect = 1.1
Identities = 19/56 (33%), Positives = 26/56 (46%)
Frame = -1
Query: 487 NSGLVYAVFSYTAARSDELSFETGTRLQVLRKGDDNEREWWWCRDDNGQEGYVPRN 320
+S V A+++YTA ELS + G +QV + N W NG G P N
Sbjct: 585 DSSYVKALYAYTAQSDMELSIQEGDIIQVTNR---NAGNGWSEGILNGVTGQFPAN 637
>SPAC110.02 |pds5||cohesin-associated protein
Pds5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1205
Score = 27.9 bits (59), Expect = 1.5
Identities = 25/94 (26%), Positives = 47/94 (50%), Gaps = 6/94 (6%)
Frame = +1
Query: 367 TIRVRCHLPSSKLEVSFQSRKTTRRYELPCMRKLHIRDHCSLCRVLLXRCIDILSIRQIL 546
+I++ +PSS LEV + + +TT CM +L ++ S + L R LSI+
Sbjct: 437 SIQMFSWIPSSLLEVFYVNDETTNAAVEICMAELVLQYLSSDTQTRLNRL--FLSIKYFS 494
Query: 547 PHLLRIF-----RPLSHDQIXSWRI-CMHHYHRG 630
+R+F R + + ++ ++ I C +Y+ G
Sbjct: 495 EKAMRVFILLLQRQVKYSELLNYYIECCKNYNGG 528
>SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1233
Score = 25.4 bits (53), Expect = 7.9
Identities = 13/43 (30%), Positives = 26/43 (60%)
Frame = -1
Query: 409 LQVLRKGDDNEREWWWCRDDNGQEGYVPRNLLGLYRRVTPQQE 281
+Q++ + D+N +E ++ +EG + RNLL R+V Q++
Sbjct: 260 IQLIERRDENTKEIEKLKE---KEGSIRRNLLAFDRKVRKQEK 299
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,617,656
Number of Sequences: 5004
Number of extensions: 49509
Number of successful extensions: 136
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 131
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 136
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 325165428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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