Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_E10
         (703 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0924 - 7131937-7132041,7132309-7132407,7132498-7132596,713...    29   4.7  
11_04_0109 - 13532432-13532988,13533267-13533450                       28   6.2  
01_06_0676 + 31101633-31102192,31102450-31102807,31103033-31103305     28   6.2  
12_02_1149 - 26467252-26468319,26468452-26469147,26469263-264694...    28   8.3  
11_01_0528 - 4148737-4149483,4149618-4150147,4150238-4150736,415...    28   8.3  
03_03_0196 + 15331604-15331646,15332141-15332260,15334106-153342...    28   8.3  

>06_01_0924 -
           7131937-7132041,7132309-7132407,7132498-7132596,
           7132807-7132905,7133068-7133166,7133316-7133395,
           7133522-7133843
          Length = 300

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = -3

Query: 695 DSDGWTPLHCAASCNN 648
           D+DGWTPLH A    N
Sbjct: 232 DNDGWTPLHLAIQSRN 247


>11_04_0109 - 13532432-13532988,13533267-13533450
          Length = 246

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -3

Query: 695 DSDGWTPLHCAASCNNPG 642
           +S G+TPLHCAA   + G
Sbjct: 104 NSSGYTPLHCAAGAGHAG 121


>01_06_0676 + 31101633-31102192,31102450-31102807,31103033-31103305
          Length = 396

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
 Frame = -1

Query: 490 MNSGLVYAVFSYTAARSDELSFETGTRLQVLRKGDD-NEREWWWCRDDNGQE 338
           ++  LV A   + AA +   +      ++V   GDD N  E WW   D GQE
Sbjct: 123 VDRSLVSAALRHVAAATARAATPEPEEVEV--NGDDENGEEMWWSPGDGGQE 172


>12_02_1149 -
           26467252-26468319,26468452-26469147,26469263-26469409,
           26470936-26471274
          Length = 749

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -1

Query: 601 ATTXSDHETAAEKCEXDEEGFDGCSEYLYS 512
           ++T  D  T  E+CE   +G + C EY+ S
Sbjct: 643 SSTDQDSGTDTEECELVSKGKESCKEYIKS 672


>11_01_0528 -
           4148737-4149483,4149618-4150147,4150238-4150736,
           4152041-4152043
          Length = 592

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 12/20 (60%), Positives = 12/20 (60%)
 Frame = -3

Query: 701 AQDSDGWTPLHCAASCNNPG 642
           AQD DG TPLH A     PG
Sbjct: 289 AQDGDGNTPLHIAVVAGAPG 308


>03_03_0196 +
           15331604-15331646,15332141-15332260,15334106-15334221,
           15334661-15334749,15334885-15334927,15335567-15335741,
           15335840-15335971,15336046-15336383,15336791-15337129,
           15337293-15337975,15338228-15338807,15339356-15339679,
           15340149-15340262
          Length = 1031

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = -3

Query: 698 QDSDGWTPLHCAASC 654
           +D+ GWT LH AASC
Sbjct: 677 RDAHGWTALHWAASC 691


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,288,309
Number of Sequences: 37544
Number of extensions: 299854
Number of successful extensions: 780
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 749
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 779
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1803843684
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)