Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_E09
         (327 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC020490-1|AAH20490.1|  223|Homo sapiens twisted gastrulation ho...    29   3.3  
AK123990-1|BAC85744.1|  120|Homo sapiens protein ( Homo sapiens ...    29   3.3  
AK075550-1|BAC11693.1|  223|Homo sapiens protein ( Homo sapiens ...    29   3.3  
AK027629-1|BAB55246.1|  148|Homo sapiens protein ( Homo sapiens ...    29   3.3  
AJ297391-1|CAC05581.1|  223|Homo sapiens twisted gastrulation pr...    29   3.3  
AF294628-1|AAG10076.1|  223|Homo sapiens twisted gastrulation pr...    29   3.3  
AF196834-1|AAG43468.1|  223|Homo sapiens twisted gastrulation-li...    29   3.3  
AK074528-1|BAC11041.1|  145|Homo sapiens protein ( Homo sapiens ...    28   5.8  

>BC020490-1|AAH20490.1|  223|Homo sapiens twisted gastrulation
           homolog 1 (Drosophila) protein.
          Length = 223

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = -3

Query: 142 HPYLYLPSTALHSPASTHKSHMQMIISFVNKMLK*IHTC 26
           H  + +PS  +H+P S+ K HM  ++ F + M   IH C
Sbjct: 145 HQNVSVPSNNVHAPYSSDKEHMCTVVYFDDCMS--IHQC 181


>AK123990-1|BAC85744.1|  120|Homo sapiens protein ( Homo sapiens
           cDNA FLJ41996 fis, clone SPLEN2029051. ).
          Length = 120

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = -3

Query: 232 CWLSSPARRPTRMWCLCRTLQLPATPFPTCHPYLYLPSTAL 110
           C L S   RP    C+   +  P +PF TC  +L+  +TA+
Sbjct: 68  CRLGSELGRPG---CVATGVSAPTSPFETCPAFLFAAATAV 105


>AK075550-1|BAC11693.1|  223|Homo sapiens protein ( Homo sapiens
           cDNA PSEC0250 fis, clone NT2RP3001874, highly similar to
           Twisted gastrulation. ).
          Length = 223

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = -3

Query: 142 HPYLYLPSTALHSPASTHKSHMQMIISFVNKMLK*IHTC 26
           H  + +PS  +H+P S+ K HM  ++ F + M   IH C
Sbjct: 145 HQNVSVPSNNVHAPYSSDKEHMCTVVYFDDCMS--IHQC 181


>AK027629-1|BAB55246.1|  148|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14723 fis, clone NT2RP3001708, weakly similar to
           TWISTED GASTRULATION PROTEIN PRECURSOR. ).
          Length = 148

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = -3

Query: 142 HPYLYLPSTALHSPASTHKSHMQMIISFVNKMLK*IHTC 26
           H  + +PS  +H+P S+ K HM  ++ F + M   IH C
Sbjct: 70  HQNVSVPSNNVHAPYSSDKEHMCTVVYFDDCMS--IHQC 106


>AJ297391-1|CAC05581.1|  223|Homo sapiens twisted gastrulation
           protein protein.
          Length = 223

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = -3

Query: 142 HPYLYLPSTALHSPASTHKSHMQMIISFVNKMLK*IHTC 26
           H  + +PS  +H+P S+ K HM  ++ F + M   IH C
Sbjct: 145 HQNVSVPSNNVHAPYSSDKEHMCTVVYFDDCMS--IHQC 181


>AF294628-1|AAG10076.1|  223|Homo sapiens twisted gastrulation
           protein precursor protein.
          Length = 223

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = -3

Query: 142 HPYLYLPSTALHSPASTHKSHMQMIISFVNKMLK*IHTC 26
           H  + +PS  +H+P S+ K HM  ++ F + M   IH C
Sbjct: 145 HQNVSVPSNNVHAPYSSDKEHMCTVVYFDDCMS--IHQC 181


>AF196834-1|AAG43468.1|  223|Homo sapiens twisted gastrulation-like
           protein precursor protein.
          Length = 223

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = -3

Query: 142 HPYLYLPSTALHSPASTHKSHMQMIISFVNKMLK*IHTC 26
           H  + +PS  +H+P S+ K HM  ++ F + M   IH C
Sbjct: 145 HQNVSVPSNNVHAPYSSDKEHMCTVVYFDDCMS--IHQC 181


>AK074528-1|BAC11041.1|  145|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90047 fis, clone HEMBA1002316. ).
          Length = 145

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 15/30 (50%), Positives = 17/30 (56%)
 Frame = -3

Query: 169 LPATPFPTCHPYLYLPSTALHSPASTHKSH 80
           L +TP P   PYLY P   + SP ST  SH
Sbjct: 42  LLSTPAPL--PYLYPPIYTITSPVSTPSSH 69


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,492,865
Number of Sequences: 237096
Number of extensions: 974323
Number of successful extensions: 2375
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2297
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2375
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1685725862
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)