Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_E08
         (349 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC110508-1|AAI10509.1| 1248|Homo sapiens DKFZP586P0123 protein p...    29   5.3  
BC035599-1|AAH35599.1|  680|Homo sapiens DKFZP586P0123 protein p...    29   5.3  
AL833903-1|CAD38759.1|  776|Homo sapiens hypothetical protein pr...    29   5.3  
AK125894-1|BAC86334.1| 1224|Homo sapiens rp86).  protein.              29   5.3  
AK091397-1|BAC03654.1|  751|Homo sapiens protein ( Homo sapiens ...    29   5.3  
AB231764-1|BAE17137.1| 1963|Homo sapiens hypothetical protein pr...    29   5.3  

>BC110508-1|AAI10509.1| 1248|Homo sapiens DKFZP586P0123 protein
            protein.
          Length = 1248

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 13/30 (43%), Positives = 20/30 (66%)
 Frame = -1

Query: 343  NSAGRFDDSVLVLTRNKQHVQQIRRFLRSI 254
            +S GR D +    +R+++HVQ IRRF  S+
Sbjct: 1113 SSPGRSDTTRSQASRHEEHVQNIRRFHESL 1142


>BC035599-1|AAH35599.1|  680|Homo sapiens DKFZP586P0123 protein
           protein.
          Length = 680

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 13/30 (43%), Positives = 20/30 (66%)
 Frame = -1

Query: 343 NSAGRFDDSVLVLTRNKQHVQQIRRFLRSI 254
           +S GR D +    +R+++HVQ IRRF  S+
Sbjct: 587 SSPGRSDTTRSQASRHEEHVQNIRRFHESL 616


>AL833903-1|CAD38759.1|  776|Homo sapiens hypothetical protein
           protein.
          Length = 776

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 13/30 (43%), Positives = 20/30 (66%)
 Frame = -1

Query: 343 NSAGRFDDSVLVLTRNKQHVQQIRRFLRSI 254
           +S GR D +    +R+++HVQ IRRF  S+
Sbjct: 636 SSPGRSDTTRSQASRHEEHVQNIRRFHESL 665


>AK125894-1|BAC86334.1| 1224|Homo sapiens rp86).  protein.
          Length = 1224

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 13/30 (43%), Positives = 20/30 (66%)
 Frame = -1

Query: 343  NSAGRFDDSVLVLTRNKQHVQQIRRFLRSI 254
            +S GR D +    +R+++HVQ IRRF  S+
Sbjct: 1089 SSPGRSDTTRSQASRHEEHVQNIRRFHESL 1118


>AK091397-1|BAC03654.1|  751|Homo sapiens protein ( Homo sapiens
           cDNA FLJ34078 fis, clone FCBBF3003557. ).
          Length = 751

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 13/30 (43%), Positives = 20/30 (66%)
 Frame = -1

Query: 343 NSAGRFDDSVLVLTRNKQHVQQIRRFLRSI 254
           +S GR D +    +R+++HVQ IRRF  S+
Sbjct: 671 SSPGRSDTTRSQASRHEEHVQNIRRFHESL 700


>AB231764-1|BAE17137.1| 1963|Homo sapiens hypothetical protein
            protein.
          Length = 1963

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 13/30 (43%), Positives = 20/30 (66%)
 Frame = -1

Query: 343  NSAGRFDDSVLVLTRNKQHVQQIRRFLRSI 254
            +S GR D +    +R+++HVQ IRRF  S+
Sbjct: 1828 SSPGRSDTTRSQASRHEEHVQNIRRFHESL 1857


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 42,687,212
Number of Sequences: 237096
Number of extensions: 618436
Number of successful extensions: 1255
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1240
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1255
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 2026198370
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)