Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_pT_D21
(855 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF132144-1|AAD33591.1| 620|Drosophila melanogaster endo/exonucl... 48 2e-05
AE014134-2061|AAF53093.1| 620|Drosophila melanogaster CG16928-P... 48 2e-05
AE014297-1413|AAF54724.2| 573|Drosophila melanogaster CG12213-P... 35 0.12
AE014297-1412|AAN13537.1| 506|Drosophila melanogaster CG12213-P... 35 0.12
BT029664-1|ABL75722.1| 294|Drosophila melanogaster IP17310p pro... 30 4.7
AE014296-3573|AAF51744.3| 2352|Drosophila melanogaster CG7177-PA... 30 4.7
AY069064-1|AAL39209.1| 759|Drosophila melanogaster GH07892p pro... 29 8.1
AE014298-2573|AAF48731.1| 759|Drosophila melanogaster CG8568-PA... 29 8.1
>AF132144-1|AAD33591.1| 620|Drosophila melanogaster
endo/exonuclease Mre11 protein.
Length = 620
Score = 47.6 bits (108), Expect = 2e-05
Identities = 35/139 (25%), Positives = 59/139 (42%), Gaps = 1/139 (0%)
Frame = -2
Query: 854 IRLSIFYERXSQNFNRIRFGQNFXGLVANXNDLLIMKXXXKIRXXRXCDPEEEGDMTGVA 675
IRL + Y S FN IRFG+ VAN D++ K + ++E +
Sbjct: 376 IRLRLLYTDESCMFNAIRFGEMLSTRVANVQDVVQFSKVVKRTKTEAVNLDKEALRRALE 435
Query: 674 AE-AADVESLLRAYYEAQPKDKRLSVLSVRVITDAVRDFTLKHNEDVLRRAFDAHKRRCI 498
A+ A VE L+ Y+E +K L + + + + + + D +K + +
Sbjct: 436 ADNATRVEELVDRYFEEAKSNKPLKLFHSKALAEMTYRLLEQRDADAAENIVKFYKEKAV 495
Query: 497 AALLESTAETEKEIAEQLE 441
L+E+ E I E+LE
Sbjct: 496 DHLMEAMPNDE-NIDEELE 513
>AE014134-2061|AAF53093.1| 620|Drosophila melanogaster CG16928-PA
protein.
Length = 620
Score = 47.6 bits (108), Expect = 2e-05
Identities = 35/139 (25%), Positives = 59/139 (42%), Gaps = 1/139 (0%)
Frame = -2
Query: 854 IRLSIFYERXSQNFNRIRFGQNFXGLVANXNDLLIMKXXXKIRXXRXCDPEEEGDMTGVA 675
IRL + Y S FN IRFG+ VAN D++ K + ++E +
Sbjct: 376 IRLRLLYTDESCMFNAIRFGEMLSTRVANVQDVVQFSKVVKRTKTEAVNLDKEALRRALE 435
Query: 674 AE-AADVESLLRAYYEAQPKDKRLSVLSVRVITDAVRDFTLKHNEDVLRRAFDAHKRRCI 498
A+ A VE L+ Y+E +K L + + + + + + D +K + +
Sbjct: 436 ADNATRVEELVDRYFEEAKSNKPLKLFHSKALAEMTYRLLEQRDADAAENIVKFYKEKAV 495
Query: 497 AALLESTAETEKEIAEQLE 441
L+E+ E I E+LE
Sbjct: 496 DHLMEAMPNDE-NIDEELE 513
>AE014297-1413|AAF54724.2| 573|Drosophila melanogaster CG12213-PA,
isoform A protein.
Length = 573
Score = 35.1 bits (77), Expect = 0.12
Identities = 34/129 (26%), Positives = 55/129 (42%), Gaps = 2/129 (1%)
Frame = -2
Query: 770 NXNDLLIMKXXXKIRXXRXCDPEE-EGDMTGVAAEAADVESLLRAYYEAQ-PKDKRLSVL 597
N L K +R + E+ EG + + D E L+ ++AQ K K L +
Sbjct: 56 NAEKLTAEKRMSALRSEKMTLQEQYEGQLAEALQKQHDTEHALQEKFDAQVEKYKLLEIK 115
Query: 596 SVRVITDAVRDFTLKHNEDVLRRAFDAHKRRCIAALLESTAETEKEIAEQLEVCKRELDE 417
+ + V+ KH ED AFD ++ +A L + A E+E+A E + L
Sbjct: 116 YTNLEAEFVKS-KKKHIEDT--NAFDQKLQKVLADLHKDKASKEREVAAWKEKLDK-LQR 171
Query: 416 ADDEKLHTL 390
+ K+H L
Sbjct: 172 DGEHKIHAL 180
>AE014297-1412|AAN13537.1| 506|Drosophila melanogaster CG12213-PB,
isoform B protein.
Length = 506
Score = 35.1 bits (77), Expect = 0.12
Identities = 34/129 (26%), Positives = 55/129 (42%), Gaps = 2/129 (1%)
Frame = -2
Query: 770 NXNDLLIMKXXXKIRXXRXCDPEE-EGDMTGVAAEAADVESLLRAYYEAQ-PKDKRLSVL 597
N L K +R + E+ EG + + D E L+ ++AQ K K L +
Sbjct: 56 NAEKLTAEKRMSALRSEKMTLQEQYEGQLAEALQKQHDTEHALQEKFDAQVEKYKLLEIK 115
Query: 596 SVRVITDAVRDFTLKHNEDVLRRAFDAHKRRCIAALLESTAETEKEIAEQLEVCKRELDE 417
+ + V+ KH ED AFD ++ +A L + A E+E+A E + L
Sbjct: 116 YTNLEAEFVKS-KKKHIEDT--NAFDQKLQKVLADLHKDKASKEREVAAWKEKLDK-LQR 171
Query: 416 ADDEKLHTL 390
+ K+H L
Sbjct: 172 DGEHKIHAL 180
>BT029664-1|ABL75722.1| 294|Drosophila melanogaster IP17310p
protein.
Length = 294
Score = 29.9 bits (64), Expect = 4.7
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +2
Query: 437 KPLVVQQFLFRSLQ*IPIVQQCNDVYEHQMPAARH 541
+PLV QQ L Q P+VQQ + +HQ P+ +H
Sbjct: 39 QPLVQQQQLPLVQQQPPLVQQQQPLVQHQQPSVQH 73
>AE014296-3573|AAF51744.3| 2352|Drosophila melanogaster CG7177-PA
protein.
Length = 2352
Score = 29.9 bits (64), Expect = 4.7
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +2
Query: 437 KPLVVQQFLFRSLQ*IPIVQQCNDVYEHQMPAARH 541
+PLV QQ L Q P+VQQ + +HQ P+ +H
Sbjct: 1224 QPLVQQQQLPLVQQQPPLVQQQQPLVQHQQPSVQH 1258
>AY069064-1|AAL39209.1| 759|Drosophila melanogaster GH07892p
protein.
Length = 759
Score = 29.1 bits (62), Expect = 8.1
Identities = 22/53 (41%), Positives = 27/53 (50%)
Frame = -2
Query: 485 ESTAETEKEIAEQLEVCKRELDEADDEKLHTLVDASARPSAPAAQLIVPVVKL 327
E + E E E+ E + E DE DDEK VDA A SA AA+ VK+
Sbjct: 654 EEEEDGEDEEGEEDEDDEEEEDEEDDEKEEGEVDA-AEESAEAAKPEESAVKI 705
>AE014298-2573|AAF48731.1| 759|Drosophila melanogaster CG8568-PA
protein.
Length = 759
Score = 29.1 bits (62), Expect = 8.1
Identities = 22/53 (41%), Positives = 27/53 (50%)
Frame = -2
Query: 485 ESTAETEKEIAEQLEVCKRELDEADDEKLHTLVDASARPSAPAAQLIVPVVKL 327
E + E E E+ E + E DE DDEK VDA A SA AA+ VK+
Sbjct: 654 EEEEDGEDEEGEEDEDDEEEEDEEDDEKEEGEVDA-AEESAEAAKPEESAVKI 705
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,221,025
Number of Sequences: 53049
Number of extensions: 545804
Number of successful extensions: 1695
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1626
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1693
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4106450400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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