Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_pT_D21
(855 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032643-4|CAA21662.1| 436|Caenorhabditis elegans Hypothetical ... 31 0.79
AC006605-4|AAK85441.2| 1378|Caenorhabditis elegans Hypothetical ... 31 0.79
Z78064-5|CAB01511.1| 473|Caenorhabditis elegans Hypothetical pr... 31 1.0
D38540-1|BAA07543.1| 284|Caenorhabditis elegans CeTMI protein. 31 1.0
D38539-1|BAA07540.1| 284|Caenorhabditis elegans CeTMI protein. 31 1.0
AL132877-1|CAC70114.1| 284|Caenorhabditis elegans Hypothetical ... 31 1.0
Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical pr... 29 3.2
U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical pr... 29 4.2
U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical pr... 29 4.2
AF003139-10|AAB54160.3| 294|Caenorhabditis elegans Hypothetical... 29 5.6
AC006834-10|AAF40005.1| 745|Caenorhabditis elegans Hypothetical... 28 7.4
>AL032643-4|CAA21662.1| 436|Caenorhabditis elegans Hypothetical
protein Y54E5A.6 protein.
Length = 436
Score = 31.5 bits (68), Expect = 0.79
Identities = 16/62 (25%), Positives = 33/62 (53%)
Frame = -2
Query: 635 YEAQPKDKRLSVLSVRVITDAVRDFTLKHNEDVLRRAFDAHKRRCIAALLESTAETEKEI 456
Y + DK+L + + RV+ +A+ ++ +D++ R K RCI + ++ E +I
Sbjct: 35 YTEEIVDKKL-IEATRVVNEALGTIDYRNGDDIILRLAPEEKGRCILQIGTNSGEKAAKI 93
Query: 455 AE 450
A+
Sbjct: 94 AQ 95
>AC006605-4|AAK85441.2| 1378|Caenorhabditis elegans Hypothetical
protein C07H6.3 protein.
Length = 1378
Score = 31.5 bits (68), Expect = 0.79
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +2
Query: 125 ISELPNASEFCVPAARGQVPKP*SLGCSFLEETF 226
I+EL +A EF + R Q+ + ++ CSFL ETF
Sbjct: 421 INELADALEFSIRDLRSQIVREAAVTCSFLFETF 454
>Z78064-5|CAB01511.1| 473|Caenorhabditis elegans Hypothetical
protein F57B1.2 protein.
Length = 473
Score = 31.1 bits (67), Expect = 1.0
Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
Frame = -2
Query: 578 DAVRDFTLKHNEDVLRRAFDAHKRRCIAAL--LESTAETEKEIAEQLEVCKRELDEADDE 405
D DF H E +L + K +A+ L+ + EI++ L+ K+E+D+A
Sbjct: 174 DKQLDFKTDHLEKLLENVLEHSKGWKESAIEELKQIKLWQAEISDALQQMKKEIDDAKST 233
Query: 404 KLHTLVDASARPSAPAAQL 348
K+ A +AP A L
Sbjct: 234 KIIHSTPEKAPETAPTASL 252
>D38540-1|BAA07543.1| 284|Caenorhabditis elegans CeTMI protein.
Length = 284
Score = 31.1 bits (67), Expect = 1.0
Identities = 26/99 (26%), Positives = 53/99 (53%), Gaps = 4/99 (4%)
Frame = -2
Query: 680 VAAEAADVES-LLRAYYEAQPKDKRLSVLS--VRVITDAVRDFTLKHNEDVLRRAFDAHK 510
VA + A VE+ L RA A+ + ++ L +RV+ + ++ + + + R +
Sbjct: 165 VARKLAMVEADLERAEERAEAGENKIVELEEELRVVGNNLKSLEVSEEKALQREDSYEEQ 224
Query: 509 RRCIAALLESTAETEKEIAEQ-LEVCKRELDEADDEKLH 396
R +++ L+ AET E AE+ ++ ++E+D +DE +H
Sbjct: 225 IRTVSSRLKE-AETRAEFAERSVQKLQKEVDRLEDELVH 262
>D38539-1|BAA07540.1| 284|Caenorhabditis elegans CeTMI protein.
Length = 284
Score = 31.1 bits (67), Expect = 1.0
Identities = 26/99 (26%), Positives = 53/99 (53%), Gaps = 4/99 (4%)
Frame = -2
Query: 680 VAAEAADVES-LLRAYYEAQPKDKRLSVLS--VRVITDAVRDFTLKHNEDVLRRAFDAHK 510
VA + A VE+ L RA A+ + ++ L +RV+ + ++ + + + R +
Sbjct: 165 VARKLAMVEADLERAEERAEAGENKIVELEEELRVVGNNLKSLEVSEEKALQREDSYEEQ 224
Query: 509 RRCIAALLESTAETEKEIAEQ-LEVCKRELDEADDEKLH 396
R +++ L+ AET E AE+ ++ ++E+D +DE +H
Sbjct: 225 IRTVSSRLKE-AETRAEFAERSVQKLQKEVDRLEDELVH 262
>AL132877-1|CAC70114.1| 284|Caenorhabditis elegans Hypothetical
protein Y105E8B.1a protein.
Length = 284
Score = 31.1 bits (67), Expect = 1.0
Identities = 26/99 (26%), Positives = 53/99 (53%), Gaps = 4/99 (4%)
Frame = -2
Query: 680 VAAEAADVES-LLRAYYEAQPKDKRLSVLS--VRVITDAVRDFTLKHNEDVLRRAFDAHK 510
VA + A VE+ L RA A+ + ++ L +RV+ + ++ + + + R +
Sbjct: 165 VARKLAMVEADLERAEERAEAGENKIVELEEELRVVGNNLKSLEVSEEKALQREDSYEEQ 224
Query: 509 RRCIAALLESTAETEKEIAEQ-LEVCKRELDEADDEKLH 396
R +++ L+ AET E AE+ ++ ++E+D +DE +H
Sbjct: 225 IRTVSSRLKE-AETRAEFAERSVQKLQKEVDRLEDELVH 262
>Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical
protein F59A2.6 protein.
Length = 1133
Score = 29.5 bits (63), Expect = 3.2
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = -2
Query: 521 DAHKRRCIAALLESTAETE-KEIAEQLEVCKRELDEADDEK 402
DA R + LES + EI +Q+E K+EL+ ++ EK
Sbjct: 272 DAENERNLKTALESDESSAISEITKQMEAAKKELEASEKEK 312
>Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical
protein F59A2.6 protein.
Length = 1133
Score = 29.5 bits (63), Expect = 3.2
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = -2
Query: 521 DAHKRRCIAALLESTAETE-KEIAEQLEVCKRELDEADDEK 402
DA R + LES + EI +Q+E K+EL+ ++ EK
Sbjct: 272 DAENERNLKTALESDESSAISEITKQMEAAKKELEASEKEK 312
>U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical
protein C18C4.5b protein.
Length = 1046
Score = 29.1 bits (62), Expect = 4.2
Identities = 23/79 (29%), Positives = 38/79 (48%)
Frame = -2
Query: 650 LLRAYYEAQPKDKRLSVLSVRVITDAVRDFTLKHNEDVLRRAFDAHKRRCIAALLESTAE 471
LL A AQ ++ + + R+IT D + +D LRR + +++ +E+ E
Sbjct: 307 LLAAESRAQQAEEDVRDMKERIITSKKDDDSNNLLQDELRRTEEKYQQ--AQKKIENLDE 364
Query: 470 TEKEIAEQLEVCKRELDEA 414
T K+ Q+ R LDEA
Sbjct: 365 TIKQQETQIRDLGRSLDEA 383
>U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical
protein C18C4.5a protein.
Length = 1022
Score = 29.1 bits (62), Expect = 4.2
Identities = 23/79 (29%), Positives = 38/79 (48%)
Frame = -2
Query: 650 LLRAYYEAQPKDKRLSVLSVRVITDAVRDFTLKHNEDVLRRAFDAHKRRCIAALLESTAE 471
LL A AQ ++ + + R+IT D + +D LRR + +++ +E+ E
Sbjct: 307 LLAAESRAQQAEEDVRDMKERIITSKKDDDSNNLLQDELRRTEEKYQQ--AQKKIENLDE 364
Query: 470 TEKEIAEQLEVCKRELDEA 414
T K+ Q+ R LDEA
Sbjct: 365 TIKQQETQIRDLGRSLDEA 383
>AF003139-10|AAB54160.3| 294|Caenorhabditis elegans Hypothetical
protein F53G12.4 protein.
Length = 294
Score = 28.7 bits (61), Expect = 5.6
Identities = 27/139 (19%), Positives = 60/139 (43%), Gaps = 2/139 (1%)
Frame = -2
Query: 692 DMTGVAAEAADVESLL--RAYYEAQPKDKRLSVLSVRVITDAVRDFTLKHNEDVLRRAFD 519
D TG E ++S+ R + + DK+ + L + ++D +F +R+ +
Sbjct: 54 DGTGDDFERKSIKSIGAGRPFAKINMVDKQRAPLKITPLSD--EEF-----RKTMRKRME 106
Query: 518 AHKRRCIAALLESTAETEKEIAEQLEVCKRELDEADDEKLHTLVDASARPSAPAAQLIVP 339
+ R +A L + + + + + +EKL T D +P+A A+ ++
Sbjct: 107 MERER-LARLSNQAEDDSDDSSSSSDSSTSSASSSSEEKL-TFSDILGKPTAAGAEKMIE 164
Query: 338 VVKLPNTVGKRTIVVLSSD 282
+ ++PN G +++ D
Sbjct: 165 LSQIPNAWGPSKSALVTDD 183
>AC006834-10|AAF40005.1| 745|Caenorhabditis elegans Hypothetical
protein ZK973.1 protein.
Length = 745
Score = 28.3 bits (60), Expect = 7.4
Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = -2
Query: 494 ALLESTAETEKEIAEQLEVCKRELDEADDE--KLHTLVDASARPSAPAAQLIVPVVKLPN 321
+LL + +T K++ E L++C +L D+E K+ +D + +A+L K
Sbjct: 156 SLLSNGLKTVKDVEEHLKICLADLINRDEEVRKVSANIDILKKECRVSAKLSREAEKNRK 215
Query: 320 TVGKRTIV 297
+ KR I+
Sbjct: 216 DLEKRGII 223
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,561,169
Number of Sequences: 27780
Number of extensions: 276044
Number of successful extensions: 957
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 922
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 957
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2129473654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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