Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_D18
         (743 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8IHW0 Cluster: Myosin heavy chain subunit, putative; n...    36   1.1  
UniRef50_UPI0000499D37 Cluster: hypothetical protein 102.t00018;...    33   7.4  

>UniRef50_Q8IHW0 Cluster: Myosin heavy chain subunit, putative; n=2;
            Plasmodium|Rep: Myosin heavy chain subunit, putative -
            Plasmodium falciparum (isolate 3D7)
          Length = 1600

 Score = 35.9 bits (79), Expect = 1.1
 Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
 Frame = -1

Query: 362  NQRTFTERNTLPYLKIQVLFL-*FVISPNVFKSYVRSVINIIHNVELGYFYSYDKKMFFR 186
            N RT+  R    Y+K Q+LF+  + +    FK  V++  NII    + Y   YD K  + 
Sbjct: 1305 NYRTYILRKKFLYMKKQILFIQDYYLFQKYFKQRVKAA-NIIRKNWIMYITKYDYK--YL 1361

Query: 185  LKFILKIQ 162
            LK I+KIQ
Sbjct: 1362 LKCIIKIQ 1369


>UniRef50_UPI0000499D37 Cluster: hypothetical protein 102.t00018;
           n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
           protein 102.t00018 - Entamoeba histolytica HM-1:IMSS
          Length = 1717

 Score = 33.1 bits (72), Expect = 7.4
 Identities = 16/53 (30%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
 Frame = -1

Query: 362 NQRTFTERNTLPYLKIQVLFL*FVISPNVFKSYVRSVINIIHNVEL-GYFYSY 207
           N++ FT   T+  + I+ +    +I P   K Y+  VI I++N+E+ G  Y++
Sbjct: 198 NRKQFTNALTIAMIIIEPIIKNTIIEPIYLKEYMNGVIEILNNIEIYGKEYNF 250


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 633,216,903
Number of Sequences: 1657284
Number of extensions: 11182201
Number of successful extensions: 19584
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 19015
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19581
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60911752460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)