Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_D16
         (707 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-10|CAJ14151.1|  548|Anopheles gambiae putative alkaline...    80   6e-17
AJ549085-1|CAD70159.1|  529|Anopheles gambiae thioredoxin-disulf...    27   0.58 
AJ549084-1|CAD70158.1|  505|Anopheles gambiae thioredoxin-disulf...    27   0.58 
AJ459821-1|CAD30858.1|  502|Anopheles gambiae thioredoxin reduct...    27   0.58 
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            27   0.76 
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    25   1.8  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    23   7.1  

>CR954256-10|CAJ14151.1|  548|Anopheles gambiae putative alkaline
           phosphatase protein.
          Length = 548

 Score = 80.2 bits (189), Expect = 6e-17
 Identities = 35/83 (42%), Positives = 53/83 (63%)
 Frame = -3

Query: 669 MPSISDMVEAAIKVLRKNKNGYFLMVEGGNVDMAHHRGWAKRAVDESXXXXXXXXXXXAH 490
           +P++S+MV  A+ +L +N NGYFL VEGG +D  HH     RA DE+           + 
Sbjct: 350 IPTLSEMVSTAMDILERNDNGYFLFVEGGRIDHGHHYTQPIRAFDETVEFAKAIEMARSR 409

Query: 489 TDPRDTLLVVTSDHTHTLSINGY 421
           T   +TL+VVT+DH+HT++++GY
Sbjct: 410 TSQDNTLIVVTADHSHTMTMSGY 432



 Score = 62.1 bits (144), Expect = 2e-11
 Identities = 40/107 (37%), Positives = 60/107 (56%), Gaps = 1/107 (0%)
 Frame = -1

Query: 404 DIFGIAQTSKYDN-VNYTTLSYGTGGPGSMKYSVKTEHNRTVAAREDPGVNTDSFDYQQI 228
           DI G+    + D+ + Y T+SY  G PG  + +V+ E  R    R D  +   SF +   
Sbjct: 438 DILGVNNGQRADDELPYATISYANG-PGYDR-NVQREA-RLDLNRVD--MRDKSFAFPST 492

Query: 227 AAITLDENSHGGGDVVVYARGPHAHLFHNVHEQHYVYHAISYAAKMG 87
             + L+  +HGG DV V+A GP AHLF   +EQH++ HA++YA  +G
Sbjct: 493 VPLGLE--THGGDDVAVFASGPWAHLFSGTYEQHFIPHAMAYAGCIG 537


>AJ549085-1|CAD70159.1|  529|Anopheles gambiae thioredoxin-disulfide
           reductase protein.
          Length = 529

 Score = 27.1 bits (57), Expect = 0.58
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = +3

Query: 180 HHVSAPVAVLVQSDGRYLLVVEAV 251
           HH S P+AV  Q DGR L+  E V
Sbjct: 275 HHRSRPLAVEKQPDGRLLVRYETV 298


>AJ549084-1|CAD70158.1|  505|Anopheles gambiae thioredoxin-disulfide
           reductase protein.
          Length = 505

 Score = 27.1 bits (57), Expect = 0.58
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = +3

Query: 180 HHVSAPVAVLVQSDGRYLLVVEAV 251
           HH S P+AV  Q DGR L+  E V
Sbjct: 251 HHRSRPLAVEKQPDGRLLVRYETV 274


>AJ459821-1|CAD30858.1|  502|Anopheles gambiae thioredoxin reductase
           protein.
          Length = 502

 Score = 27.1 bits (57), Expect = 0.58
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = +3

Query: 180 HHVSAPVAVLVQSDGRYLLVVEAV 251
           HH S P+AV  Q DGR L+  E V
Sbjct: 248 HHRSRPLAVEKQPDGRLLVRYETV 271


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 26.6 bits (56), Expect = 0.76
 Identities = 12/20 (60%), Positives = 13/20 (65%), Gaps = 1/20 (5%)
 Frame = +1

Query: 505 PHGA-LEGRGLVDGALGPAP 561
           PHGA  +GR L  G LGP P
Sbjct: 513 PHGAGYDGRDLTGGPLGPPP 532


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 17/71 (23%), Positives = 25/71 (35%)
 Frame = -1

Query: 362 NYTTLSYGTGGPGSMKYSVKTEHNRTVAAREDPGVNTDSFDYQQIAAITLDENSHGGGDV 183
           N  ++S+ T  P S        H    A         D F +  +  +    NSHG    
Sbjct: 228 NQPSISWSTADPSSSPAYSSITHYEPTARSLANNTFVDGFKFNGLVQLNHINNSHGRMLD 287

Query: 182 VVYARGPHAHL 150
           ++YA    A L
Sbjct: 288 LLYANNAAAKL 298


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 23.4 bits (48), Expect = 7.1
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -1

Query: 362 NYTTLSYGTGGPGS 321
           NY  L+YG+GG G+
Sbjct: 528 NYNLLNYGSGGGGA 541


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 657,035
Number of Sequences: 2352
Number of extensions: 12724
Number of successful extensions: 23
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72340815
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)