Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_D15
         (792 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    32   0.018
DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1 pro...    29   0.16 
DQ974169-1|ABJ52809.1|  508|Anopheles gambiae serpin 11 protein.       27   0.66 

>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 32.3 bits (70), Expect = 0.018
 Identities = 17/54 (31%), Positives = 36/54 (66%)
 Frame = -2

Query: 353 LMRVQELSGVKLLQEEEIERLKKKEPELGLGELTIDLASKEDEMSCIKIKIANR 192
           + + QEL+ ++  +EE  E LK+K+ E  +G++T ++A KE E+  ++ +++ R
Sbjct: 253 ISKQQELNIIEKRKEEADEVLKEKKKE--VGKMTREMAKKEQEIREVEAEMSKR 304


>DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1
           protein.
          Length = 545

 Score = 29.1 bits (62), Expect = 0.16
 Identities = 15/34 (44%), Positives = 18/34 (52%)
 Frame = -2

Query: 395 NGPLRLQNQKWIQNLMRVQELSGVKLLQEEEIER 294
           +G  R+  QKWI    R  E  G +L QEEE  R
Sbjct: 213 DGNARIAFQKWIGGETRALEALGARLKQEEEAFR 246


>DQ974169-1|ABJ52809.1|  508|Anopheles gambiae serpin 11 protein.
          Length = 508

 Score = 27.1 bits (57), Expect = 0.66
 Identities = 19/79 (24%), Positives = 34/79 (43%)
 Frame = -2

Query: 437 NITQLTKELREAESNGPLRLQNQKWIQNLMRVQELSGVKLLQEEEIERLKKKEPELGLGE 258
           N+  LTKELR   +          WI+       +S +  L  E+ +  ++         
Sbjct: 316 NMMFLTKELRNGNTRTDDSAHGMTWIELPYDGDRMSMILFLPNEQFQLDRELRRFTAQDL 375

Query: 257 LTIDLASKEDEMSCIKIKI 201
           LTI    ++DE S +K+++
Sbjct: 376 LTILTEIEQDEPSKVKLQL 394


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 642,619
Number of Sequences: 2352
Number of extensions: 9937
Number of successful extensions: 73
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 73
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 83160600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)