Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_D12
         (518 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4J6G6 Cluster: Thermopsin-like protein; n=1; Sulfolobu...    33   3.0  
UniRef50_Q1VJE3 Cluster: Putative uncharacterized protein; n=1; ...    33   5.2  
UniRef50_UPI0000D8A031 Cluster: hypothetical protein, conserved;...    32   6.8  
UniRef50_Q98PY1 Cluster: Putative uncharacterized protein MYPU_5...    32   9.0  

>UniRef50_Q4J6G6 Cluster: Thermopsin-like protein; n=1; Sulfolobus
           acidocaldarius|Rep: Thermopsin-like protein - Sulfolobus
           acidocaldarius
          Length = 434

 Score = 33.5 bits (73), Expect = 3.0
 Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = -3

Query: 483 FSGTNELRFNFFIYFKCWNLFKFYNLNL-KAVSETYRNV 370
           FS  N+  FN  +    WNL   +NLNL K +  TY+N+
Sbjct: 96  FSQINKTAFNASLVVNVWNLLGPFNLNLSKGIETTYQNL 134


>UniRef50_Q1VJE3 Cluster: Putative uncharacterized protein; n=1;
           Psychroflexus torquis ATCC 700755|Rep: Putative
           uncharacterized protein - Psychroflexus torquis ATCC
           700755
          Length = 353

 Score = 32.7 bits (71), Expect = 5.2
 Identities = 18/45 (40%), Positives = 23/45 (51%)
 Frame = -3

Query: 477 GTNELRFNFFIYFKCWNLFKFYNLNLKAVSETYRNVIFFMAFVFL 343
           G ++    FF    C  L  FYN N+      Y+NV+FF  FVFL
Sbjct: 211 GNDDPAHIFFYLTICNYLLTFYNKNINH----YKNVVFFSVFVFL 251


>UniRef50_UPI0000D8A031 Cluster: hypothetical protein, conserved;
           n=1; Eimeria tenella|Rep: hypothetical protein,
           conserved - Eimeria tenella
          Length = 1486

 Score = 32.3 bits (70), Expect = 6.8
 Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
 Frame = -3

Query: 465 LRFNF-FIYFKCWNLFKFYNLNLKAVSETYRNVIFFMAFVFLEVFYXWCFSFCF 307
           L F+F F+    W LF F+  +   V  ++  V+F   F  + +F  + FSFCF
Sbjct: 487 LLFSFCFLVSSFWFLFIFFLFSFCFVLFSFCFVLFSFCFPLIFLFIFFLFSFCF 540


>UniRef50_Q98PY1 Cluster: Putative uncharacterized protein
           MYPU_5880; n=1; Mycoplasma pulmonis|Rep: Putative
           uncharacterized protein MYPU_5880 - Mycoplasma pulmonis
          Length = 316

 Score = 31.9 bits (69), Expect = 9.0
 Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
 Frame = -3

Query: 459 FNFF-IYFKCWNLFKFYNLNLKAVSETYRNVIFFMAFVFLEVFYXWCFSF--CFPR 301
           +NFF IYF  +  F F+N++  + S  +    F+  F F+  F    FSF  CF R
Sbjct: 12  WNFFNIYF--FYFFSFFNIDFFSFSTCFNTSFFWCTFSFVTYFCFRSFSFKSCFIR 65


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 327,474,660
Number of Sequences: 1657284
Number of extensions: 4520375
Number of successful extensions: 11345
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10991
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11305
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32201017387
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)