Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_D10
         (440 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70684-7|CAA94601.1|  143|Caenorhabditis elegans Hypothetical pr...    39   0.001
Z73899-1|CAA98073.3|  433|Caenorhabditis elegans Hypothetical pr...    27   4.6  
AL110479-19|CAB54366.1|  222|Caenorhabditis elegans Hypothetical...    27   4.6  
Z69885-5|CAA93756.2|  882|Caenorhabditis elegans Hypothetical pr...    27   6.0  
AY064464-1|AAL40874.1|  882|Caenorhabditis elegans minibrain kin...    27   6.0  
Z93380-6|CAB07602.2|  339|Caenorhabditis elegans Hypothetical pr...    27   8.0  
Z81587-13|CAB04710.2|  339|Caenorhabditis elegans Hypothetical p...    27   8.0  
AC025726-27|AAK73932.2|  383|Caenorhabditis elegans Hypothetical...    27   8.0  

>Z70684-7|CAA94601.1|  143|Caenorhabditis elegans Hypothetical
           protein F28D1.7 protein.
          Length = 143

 Score = 39.1 bits (87), Expect = 0.001
 Identities = 17/23 (73%), Positives = 21/23 (91%)
 Frame = -2

Query: 421 QVVKVANVSLLALYKEKKERPRS 353
           ++VKVAN SL+AL+K KKERPRS
Sbjct: 121 KIVKVANTSLIALFKGKKERPRS 143


>Z73899-1|CAA98073.3|  433|Caenorhabditis elegans Hypothetical
           protein ZK829.3 protein.
          Length = 433

 Score = 27.5 bits (58), Expect = 4.6
 Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = -3

Query: 153 ITDAFKLRS*LTYRNKLNSKEQTI-NEYLFV 64
           ITD +KL+   TYR  +NS+   + NE  FV
Sbjct: 281 ITDGWKLKKLTTYRVTMNSQNDVVLNEKCFV 311


>AL110479-19|CAB54366.1|  222|Caenorhabditis elegans Hypothetical
           protein Y105C5B.20 protein.
          Length = 222

 Score = 27.5 bits (58), Expect = 4.6
 Identities = 17/49 (34%), Positives = 29/49 (59%)
 Frame = +3

Query: 156 FDVMALSSSKYQNDNIIYCTNRVKVEYRNKYTVDKTFKLNLTKIEEKQR 302
           FDV+  + +K +  N I   N  K +   +  VD+T K++LT++E KQ+
Sbjct: 175 FDVLKSNLNKNEQLNDIDGRNNQKSDKMTE--VDQTDKMHLTELEVKQK 221


>Z69885-5|CAA93756.2|  882|Caenorhabditis elegans Hypothetical
           protein T04C10.1 protein.
          Length = 882

 Score = 27.1 bits (57), Expect = 6.0
 Identities = 12/39 (30%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
 Frame = +3

Query: 231 EYRNKYTVDKTFKLNLTKIEEKQR*K-SQNQYNIYLITM 344
           E+RN++ +D TF+    K+++    + S+NQ+N   ++M
Sbjct: 822 EWRNQFELDDTFQQKQRKVDDSVSNQISRNQFNPQQVSM 860


>AY064464-1|AAL40874.1|  882|Caenorhabditis elegans minibrain kinase
           protein.
          Length = 882

 Score = 27.1 bits (57), Expect = 6.0
 Identities = 12/39 (30%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
 Frame = +3

Query: 231 EYRNKYTVDKTFKLNLTKIEEKQR*K-SQNQYNIYLITM 344
           E+RN++ +D TF+    K+++    + S+NQ+N   ++M
Sbjct: 822 EWRNQFELDDTFQQKQRKVDDSVSNQISRNQFNPQQVSM 860


>Z93380-6|CAB07602.2|  339|Caenorhabditis elegans Hypothetical
           protein F28C12.7 protein.
          Length = 339

 Score = 26.6 bits (56), Expect = 8.0
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = -2

Query: 310 DFQRCFSSIFVKFNLKVLSTVYLFLYSTLTLFVQ 209
           D     +S+ +KFN   +ST+ L  Y  + L +Q
Sbjct: 18  DLSSALTSVTIKFNCIFISTIVLISYCFILLAIQ 51


>Z81587-13|CAB04710.2|  339|Caenorhabditis elegans Hypothetical
           protein F28C12.7 protein.
          Length = 339

 Score = 26.6 bits (56), Expect = 8.0
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = -2

Query: 310 DFQRCFSSIFVKFNLKVLSTVYLFLYSTLTLFVQ 209
           D     +S+ +KFN   +ST+ L  Y  + L +Q
Sbjct: 18  DLSSALTSVTIKFNCIFISTIVLISYCFILLAIQ 51


>AC025726-27|AAK73932.2|  383|Caenorhabditis elegans Hypothetical
           protein Y71G12B.6 protein.
          Length = 383

 Score = 26.6 bits (56), Expect = 8.0
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +1

Query: 292 KNNVENLRINTIFTLSQCTPMILVAP 369
           KN +EN +I TIF  S  T  +L+ P
Sbjct: 60  KNLIENYKIQTIFDASLTTTDVLLEP 85


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,662,753
Number of Sequences: 27780
Number of extensions: 144419
Number of successful extensions: 345
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 338
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 345
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 756625558
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)