Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_pT_D02
(621 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein. 23 1.8
AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive... 23 1.8
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 23 2.4
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 23 2.4
AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein. 22 4.2
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 22 4.2
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 22 4.2
AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine beta-sy... 22 4.2
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 21 7.3
DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor pro... 21 7.3
AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisp... 21 9.7
>AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein.
Length = 366
Score = 23.4 bits (48), Expect = 1.8
Identities = 9/30 (30%), Positives = 15/30 (50%)
Frame = -1
Query: 207 LHNTRPHTQPDHTKTESNSPYLCGVPMYFS 118
LH+ P DH++ + + YL P +S
Sbjct: 120 LHDNSPSFLSDHSRDQEQNLYLTPSPQMYS 149
>AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive
opsin protein.
Length = 371
Score = 23.4 bits (48), Expect = 1.8
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = -2
Query: 182 NPTTPKLNRILLISVAFLCILVSFFTTWIFMRMK 81
NP+ L +L I FL +L + WIF K
Sbjct: 44 NPSLHYLLALLYILFTFLALLGNGLVIWIFCAAK 77
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 23.0 bits (47), Expect = 2.4
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -2
Query: 338 PSVGSTTDEHGHSRPVAFMPNRVNGQY 258
P VG T+ HSR + R NG+Y
Sbjct: 1761 PPVGHPTNASAHSRSGSQSMPRQNGRY 1787
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 23.0 bits (47), Expect = 2.4
Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = -2
Query: 479 TVLEIPNIKIKKPTWLQAPSAMTTFSLVLLSYFLVT-GGIIYDVIVEPPSVG 327
T+L K+ +Q P + + +SY T G+IY ++ PS G
Sbjct: 805 TILSPVREKLSSSQPMQPPQ-QNPYMFLPVSYMSTTMAGVIYPPVIGTPSTG 855
>AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein.
Length = 349
Score = 22.2 bits (45), Expect = 4.2
Identities = 6/20 (30%), Positives = 15/20 (75%)
Frame = -1
Query: 63 ELICKLILYCFIFGLYTNKF 4
+++C+++ + +FGLY + F
Sbjct: 108 DVMCRIMAFFRMFGLYLSSF 127
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 22.2 bits (45), Expect = 4.2
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = -3
Query: 304 TADL*PSCRIVLMVS-TSWKVLRRASSSHSEGLAS*Y*TAHTTRPHQN*IEFSLS 143
T + PS ++ + S TS +L S H+ G + T H H N E LS
Sbjct: 1400 TVQVPPSAPVLYVTSSTSSSILLHWKSGHNGGASLTGYTLHYRTAHGNLDELQLS 1454
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 22.2 bits (45), Expect = 4.2
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = -3
Query: 304 TADL*PSCRIVLMVS-TSWKVLRRASSSHSEGLAS*Y*TAHTTRPHQN*IEFSLS 143
T + PS ++ + S TS +L S H+ G + T H H N E LS
Sbjct: 1396 TVQVPPSAPVLYVTSSTSSSILLHWKSGHNGGASLTGYTLHYRTAHGNLDELQLS 1450
>AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine
beta-synthase protein.
Length = 504
Score = 22.2 bits (45), Expect = 4.2
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +1
Query: 295 GLLCPCSSVVEPTLGGSTI 351
GLL P +++EPT G + I
Sbjct: 93 GLLKPGCTIIEPTSGNTGI 111
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 21.4 bits (43), Expect = 7.3
Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Frame = -1
Query: 414 DNLFTGVTLLLFGYWRYYLRC--DSRATERGFNDR 316
D F G T + WR+ L+C D + R N R
Sbjct: 56 DPWFAGSTNIGINKWRFLLQCLEDLDCSLRKLNSR 90
>DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor
protein.
Length = 405
Score = 21.4 bits (43), Expect = 7.3
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -2
Query: 491 AIPFTVLEIPNIKIKKPTWL 432
A PF +E P+I + TWL
Sbjct: 328 ATPFVPVEPPDILMPALTWL 347
>AF388659-3|AAK71993.1| 548|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
Length = 548
Score = 21.0 bits (42), Expect = 9.7
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = +3
Query: 225 EEEARRKTFHDVLTINTIRHEGYRS 299
E++ R+K+ DV + R + Y+S
Sbjct: 122 EQKRRKKSLDDVKILRNDRIDSYKS 146
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,263
Number of Sequences: 438
Number of extensions: 4127
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18460203
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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