Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_C24
         (566 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC025715-7|AAK68443.1|  178|Caenorhabditis elegans Hypothetical ...    86   1e-17
AF016445-1|AAC69057.2|  367|Caenorhabditis elegans Serpentine re...    29   1.8  
Z81571-5|CAB04615.1|  419|Caenorhabditis elegans Hypothetical pr...    29   3.1  
Z81571-3|CAB04613.1|  352|Caenorhabditis elegans Hypothetical pr...    29   3.1  
Z78546-1|CAB01769.1|  364|Caenorhabditis elegans Hypothetical pr...    27   7.1  
Z50027-1|CAA90331.1|  583|Caenorhabditis elegans Hypothetical pr...    27   7.1  
U00032-9|AAA50631.1|  229|Caenorhabditis elegans Hypothetical pr...    27   7.1  
AF039049-7|AAB94243.2|  300|Caenorhabditis elegans Serpentine re...    27   7.1  

>AC025715-7|AAK68443.1|  178|Caenorhabditis elegans Hypothetical
           protein Y38F2AR.2 protein.
          Length = 178

 Score = 86.2 bits (204), Expect = 1e-17
 Identities = 43/103 (41%), Positives = 65/103 (63%)
 Frame = -1

Query: 557 LVTAASTWLLALAYRNTKFQLKHXXXXXXXXXXXXEMSRKLADDKXMSRKEKDERILWKK 378
           L    + +LL+LA +N K  LKH            E+S + A DK M+ KEK+ER L++K
Sbjct: 59  LSAVGTAYLLSLACKNQKCLLKHQIVMKRGSAVEREISGQYAADKKMTVKEKEERALFRK 118

Query: 377 NEVADYEATTYSIFYNNALFLTIVILSSFYILRTFTPTVNYIV 249
           NEVAD E+T  S+FY N+L+LTI+++S+F++L    P  N ++
Sbjct: 119 NEVADTESTYLSVFYTNSLYLTIMLVSAFFLLANVAPVFNLLI 161


>AF016445-1|AAC69057.2|  367|Caenorhabditis elegans Serpentine
           receptor, class w protein132 protein.
          Length = 367

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = -1

Query: 425 KXMSRKEKDERILWKKNEVADYEATTYSIFYNNALF 318
           K + + EK  ++    N+  DY  TT  +FYN   F
Sbjct: 246 KEIRKAEKRRKVSTSFNKTKDYRRTTQLVFYNTIFF 281


>Z81571-5|CAB04615.1|  419|Caenorhabditis elegans Hypothetical
           protein M01G12.6 protein.
          Length = 419

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = -1

Query: 425 KXMSRKEKDERILWKKNEVADYEATTYSIFYNNALF 318
           K M +  +++R L    +  DY  TT  +FYN   F
Sbjct: 306 KEMHKATENQRRLTSSKKTIDYNKTTRLVFYNTLFF 341


>Z81571-3|CAB04613.1|  352|Caenorhabditis elegans Hypothetical
           protein M01G12.4 protein.
          Length = 352

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = -1

Query: 425 KXMSRKEKDERILWKKNEVADYEATTYSIFYNNALF 318
           K M +  +++R L    +  DY  TT  +FYN   F
Sbjct: 239 KEMHKATENQRRLTSSKKTIDYNKTTRLVFYNTLFF 274


>Z78546-1|CAB01769.1|  364|Caenorhabditis elegans Hypothetical
           protein T21H8.3 protein.
          Length = 364

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +1

Query: 97  YTHNSFIFLIATVCLKCLILKLFVSRGALNF 189
           Y H++ +FL+A     CLIL    +  A NF
Sbjct: 46  YYHSNLLFLVALNAASCLILAGLTAWSATNF 76


>Z50027-1|CAA90331.1|  583|Caenorhabditis elegans Hypothetical
           protein C39B10.1 protein.
          Length = 583

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 13/50 (26%), Positives = 27/50 (54%), Gaps = 6/50 (12%)
 Frame = +1

Query: 34  LTYFLCKVKTF*LTNIIYCNTYTHNSFIFLI------ATVCLKCLILKLF 165
           + Y LC + T+ + ++IY  T  +  F +++      A+ C+ C I ++F
Sbjct: 91  IIYLLCCLSTYCIPSLIYSVTPIYGPFSYILFFLQPFASFCVSCTIWQVF 140


>U00032-9|AAA50631.1|  229|Caenorhabditis elegans Hypothetical
           protein F37A4.3 protein.
          Length = 229

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 10/32 (31%), Positives = 21/32 (65%)
 Frame = -1

Query: 404 KDERILWKKNEVADYEATTYSIFYNNALFLTI 309
           +++++ W     A+YEA  +  ++N +LFLT+
Sbjct: 21  RNDKLAWS----AEYEAKKFKFYHNTSLFLTL 48


>AF039049-7|AAB94243.2|  300|Caenorhabditis elegans Serpentine
           receptor, class x protein63 protein.
          Length = 300

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 7/81 (8%)
 Frame = +3

Query: 312 SQEKCVIVEN*V-----CGSFI--ICHLILFPQDSFVLFFSAHXFIISKLPGHFTGNSIL 470
           SQ KC+I+ + +      G F   ICH     Q  F+ F ++   +I    G F  NS++
Sbjct: 118 SQTKCLILVSWMYSLTYAGLFYLRICHFRFDEQVQFLTFSNSRICMIVGWNGDFIKNSVI 177

Query: 471 PAHSNTVLQLELSVTVGKSQQ 533
            A    ++ L  +VT+ KS+Q
Sbjct: 178 VA----IIMLLDTVTIMKSRQ 194


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,447,889
Number of Sequences: 27780
Number of extensions: 221447
Number of successful extensions: 632
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 604
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 632
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1176726318
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)