Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_C18
         (675 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7Q5J0 Cluster: ENSANGP00000021022; n=4; Culicidae|Rep:...    40   0.073
UniRef50_Q08673 Cluster: Cell wall protein SRL1 precursor; n=2; ...    35   1.6  
UniRef50_A3U7L0 Cluster: 30S ribosomal protein S12; n=1; Croceib...    34   2.7  
UniRef50_Q4UH91 Cluster: Choline kinase, putative; n=1; Theileri...    34   2.7  
UniRef50_A5L550 Cluster: Putative uncharacterized protein; n=1; ...    33   4.8  
UniRef50_UPI0000519B80 Cluster: PREDICTED: hypothetical protein;...    33   6.3  
UniRef50_Q17MG3 Cluster: Putative uncharacterized protein; n=1; ...    33   6.3  
UniRef50_Q7R4G3 Cluster: GLP_49_92041_91013; n=1; Giardia lambli...    33   8.4  
UniRef50_Q4QHG2 Cluster: Putative uncharacterized protein; n=3; ...    33   8.4  
UniRef50_Q4Q2R9 Cluster: Putative uncharacterized protein; n=3; ...    33   8.4  

>UniRef50_Q7Q5J0 Cluster: ENSANGP00000021022; n=4; Culicidae|Rep:
           ENSANGP00000021022 - Anopheles gambiae str. PEST
          Length = 347

 Score = 39.5 bits (88), Expect = 0.073
 Identities = 20/55 (36%), Positives = 30/55 (54%)
 Frame = -3

Query: 529 SSGIGGGQVTYTKEVTVSRNPTLFQDIFNIPISALKAVSSFLSNTAANTNVSVQK 365
           S G  G   +     + + N   + DIFNIPIS L AV+  L+N A + ++ V+K
Sbjct: 288 SGGHSGASSSTHVVASSTHNSNFWNDIFNIPISTLTAVNQLLNNKAGSGSLHVEK 342



 Score = 33.5 bits (73), Expect = 4.8
 Identities = 15/19 (78%), Positives = 17/19 (89%)
 Frame = -3

Query: 244 DIFAIPINTLSAVNQLLEN 188
           DIF IPI+TL+AVNQLL N
Sbjct: 313 DIFNIPISTLTAVNQLLNN 331


>UniRef50_Q08673 Cluster: Cell wall protein SRL1 precursor; n=2;
           Saccharomyces cerevisiae|Rep: Cell wall protein SRL1
           precursor - Saccharomyces cerevisiae (Baker's yeast)
          Length = 210

 Score = 35.1 bits (77), Expect = 1.6
 Identities = 21/67 (31%), Positives = 35/67 (52%)
 Frame = +3

Query: 54  SLSSLSCITTTRLFARLLA*GPNLTLVGSADSSCETCTLFLTGTLFSKSWFTALRVLIGI 233
           ++ S + ++TT   A   +  P  T +  AD   +T T F+T T++S SWFT+    I  
Sbjct: 19  AIYSNNTVSTTTTLAPSYSLVPQETTISYAD---DTTTFFVTSTVYSTSWFTSTSATITN 75

Query: 234 AKMSPIT 254
           A  S ++
Sbjct: 76  AASSSLS 82


>UniRef50_A3U7L0 Cluster: 30S ribosomal protein S12; n=1;
           Croceibacter atlanticus HTCC2559|Rep: 30S ribosomal
           protein S12 - Croceibacter atlanticus HTCC2559
          Length = 562

 Score = 34.3 bits (75), Expect = 2.7
 Identities = 21/69 (30%), Positives = 37/69 (53%)
 Frame = -3

Query: 589 IEKRLDVGAQSSANVGAVAESSGIGGGQVTYTKEVTVSRNPTLFQDIFNIPISALKAVSS 410
           I+K  D   +S+ N+G   +S  I   Q T+T +   S +P   +    IPIS  +++ +
Sbjct: 78  IQKVNDSIFESTLNLGKQVDSIFIDIPQSTFTLKQLKSVDPNAKESRIKIPISKTQSILN 137

Query: 409 FLSNTAANT 383
           +L+N  AN+
Sbjct: 138 YLNNLQANS 146


>UniRef50_Q4UH91 Cluster: Choline kinase, putative; n=1; Theileria
           annulata|Rep: Choline kinase, putative - Theileria
           annulata
          Length = 536

 Score = 34.3 bits (75), Expect = 2.7
 Identities = 18/64 (28%), Positives = 32/64 (50%)
 Frame = -3

Query: 574 DVGAQSSANVGAVAESSGIGGGQVTYTKEVTVSRNPTLFQDIFNIPISALKAVSSFLSNT 395
           +VG  SS ++GAV  S+  G G     KE T + N T  +D  +  +++  + +  +   
Sbjct: 254 EVGTDSSKDIGAVGASTVTGSGTTDSNKENTSTNNLTTTKDSTDTKVNSTNSSTKDIDTI 313

Query: 394 AANT 383
            A+T
Sbjct: 314 GAST 317


>UniRef50_A5L550 Cluster: Putative uncharacterized protein; n=1;
           Vibrionales bacterium SWAT-3|Rep: Putative
           uncharacterized protein - Vibrionales bacterium SWAT-3
          Length = 3506

 Score = 33.5 bits (73), Expect = 4.8
 Identities = 20/49 (40%), Positives = 29/49 (59%)
 Frame = -3

Query: 574 DVGAQSSANVGAVAESSGIGGGQVTYTKEVTVSRNPTLFQDIFNIPISA 428
           D G  SS+    V+++S   GG +TYT E TV+ N  L  DI N+ ++A
Sbjct: 250 DAGTFSSSGNLVVSDASIDIGGSITYTIEATVADN--LVGDIVNVDVTA 296


>UniRef50_UPI0000519B80 Cluster: PREDICTED: hypothetical protein;
           n=1; Apis mellifera|Rep: PREDICTED: hypothetical protein
           - Apis mellifera
          Length = 357

 Score = 33.1 bits (72), Expect = 6.3
 Identities = 14/23 (60%), Positives = 18/23 (78%)
 Frame = -3

Query: 460 FQDIFNIPISALKAVSSFLSNTA 392
           F DIF IPIS L AV+ FL+N++
Sbjct: 334 FDDIFQIPISTLNAVNRFLNNSS 356


>UniRef50_Q17MG3 Cluster: Putative uncharacterized protein; n=1; Aedes
            aegypti|Rep: Putative uncharacterized protein - Aedes
            aegypti (Yellowfever mosquito)
          Length = 1263

 Score = 33.1 bits (72), Expect = 6.3
 Identities = 19/57 (33%), Positives = 26/57 (45%)
 Frame = -3

Query: 559  SSANVGAVAESSGIGGGQVTYTKEVTVSRNPTLFQDIFNIPISALKAVSSFLSNTAA 389
            SS+N    + S+GI GG     K  T  + P+     F+    A  A S+  SNT A
Sbjct: 839  SSSNSTVTSPSAGIFGGSAAPAKPTTFGQVPSAANSTFSFGAQAQPAASTTTSNTGA 895


>UniRef50_Q7R4G3 Cluster: GLP_49_92041_91013; n=1; Giardia lamblia
           ATCC 50803|Rep: GLP_49_92041_91013 - Giardia lamblia
           ATCC 50803
          Length = 342

 Score = 32.7 bits (71), Expect = 8.4
 Identities = 18/44 (40%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
 Frame = -3

Query: 496 TKEVTVSRNPTLFQDIFNIPI--SALKAV-SSFLSNTAANTNVS 374
           +K V +S NP +F    ++PI  +++KA  SSF++NT A T  S
Sbjct: 113 SKPVEISSNPAVFNSSPSLPIQPTSIKAAQSSFINNTEATTKTS 156


>UniRef50_Q4QHG2 Cluster: Putative uncharacterized protein; n=3;
           Leishmania|Rep: Putative uncharacterized protein -
           Leishmania major
          Length = 1144

 Score = 32.7 bits (71), Expect = 8.4
 Identities = 19/69 (27%), Positives = 37/69 (53%), Gaps = 7/69 (10%)
 Frame = -3

Query: 229 PINTLSAVNQLLENNVPVRKRVQVSQDESAEPTRVRLGPH-------ARRRANKRVVVIQ 71
           P ++L+ + +LL  N  ++ R+Q+S ++      +R   H       A  +A+++V+  Q
Sbjct: 18  PAHSLAVIEELLRENTTLKARLQLSDEQRVTQEVLREQLHRFFECVAAHEQASQKVLTDQ 77

Query: 70  ESDDKEKSD 44
             DD EKS+
Sbjct: 78  WQDDGEKSN 86


>UniRef50_Q4Q2R9 Cluster: Putative uncharacterized protein; n=3;
           Leishmania|Rep: Putative uncharacterized protein -
           Leishmania major
          Length = 301

 Score = 32.7 bits (71), Expect = 8.4
 Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
 Frame = -3

Query: 202 QLLENNVPVRKRVQVSQD----ESAEPTRVRLGPHARRRANKRVVVIQESDDKE 53
           Q+L+N V VR  V  S D    E A   R      ARR+  K+ V+ +E +D+E
Sbjct: 243 QVLQNAVVVRNEVMRSYDTEEREKARAARAEARRQARRQRKKQAVMDEEEEDEE 296


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 578,624,289
Number of Sequences: 1657284
Number of extensions: 10360654
Number of successful extensions: 27384
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 26357
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27374
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52066120554
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)