Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_C18
         (675 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF032496-1|ABK29703.1|  965|Drosophila melanogaster middleman of...    29   7.7  
AF318273-1|AAK13421.1| 1220|Drosophila melanogaster metabotropic...    29   7.7  
AF145639-1|AAD38614.1| 1221|Drosophila melanogaster BcDNA.GH0731...    29   7.7  
AE014297-3037|AAF55916.1| 1221|Drosophila melanogaster CG6706-PB...    29   7.7  
AE014297-3036|AAN13882.1| 1220|Drosophila melanogaster CG6706-PA...    29   7.7  
AE014134-2016|AAF53057.2|  968|Drosophila melanogaster CG31868-P...    29   7.7  

>EF032496-1|ABK29703.1|  965|Drosophila melanogaster middleman of
           seventy-eight signalingprotein.
          Length = 965

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 18/64 (28%), Positives = 27/64 (42%)
 Frame = -3

Query: 589 IEKRLDVGAQSSANVGAVAESSGIGGGQVTYTKEVTVSRNPTLFQDIFNIPISALKAVSS 410
           + K   V A   A VG    SSG GG  ++       + +PT         + A  +VS 
Sbjct: 497 LSKESKVSAVGGAGVGGAVASSGGGGSSMSQLAPPPTAPSPTEQAKSQMAAVVAAASVSP 556

Query: 409 FLSN 398
           F++N
Sbjct: 557 FMTN 560


>AF318273-1|AAK13421.1| 1220|Drosophila melanogaster metabotropic
            GABA-B receptor subtype2 protein.
          Length = 1220

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
 Frame = -3

Query: 589  IEKRLDVGAQSSANVGAVAESSG-IGGGQVTYTKEVTVSRNPTLFQDIFNIPISALKAVS 413
            +EKR  V AQ+  N+G++  ++G   GG  +  +E   S     +      P +  K  S
Sbjct: 923  LEKRNSVSAQTDDNIGSITSTAGKRSGGDCSSMRERRQSTASRHYDSGSQTPTARPKYSS 982

Query: 412  SFLSNTAANTNVSVQKS 362
               S+  ++TN+S  +S
Sbjct: 983  ---SHRNSSTNISTSQS 996


>AF145639-1|AAD38614.1| 1221|Drosophila melanogaster BcDNA.GH07312
            protein.
          Length = 1221

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
 Frame = -3

Query: 589  IEKRLDVGAQSSANVGAVAESSG-IGGGQVTYTKEVTVSRNPTLFQDIFNIPISALKAVS 413
            +EKR  V AQ+  N+G++  ++G   GG  +  +E   S     +      P +  K  S
Sbjct: 924  LEKRNSVSAQTDDNIGSITSTAGKRSGGDCSSMRERRQSTASRHYDSGSQTPTARPKYSS 983

Query: 412  SFLSNTAANTNVSVQKS 362
               S+  ++TN+S  +S
Sbjct: 984  ---SHRNSSTNISTSQS 997


>AE014297-3037|AAF55916.1| 1221|Drosophila melanogaster CG6706-PB,
            isoform B protein.
          Length = 1221

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
 Frame = -3

Query: 589  IEKRLDVGAQSSANVGAVAESSG-IGGGQVTYTKEVTVSRNPTLFQDIFNIPISALKAVS 413
            +EKR  V AQ+  N+G++  ++G   GG  +  +E   S     +      P +  K  S
Sbjct: 924  LEKRNSVSAQTDDNIGSITSTAGKRSGGDCSSMRERRQSTASRHYDSGSQTPTARPKYSS 983

Query: 412  SFLSNTAANTNVSVQKS 362
               S+  ++TN+S  +S
Sbjct: 984  ---SHRNSSTNISTSQS 997


>AE014297-3036|AAN13882.1| 1220|Drosophila melanogaster CG6706-PA,
            isoform A protein.
          Length = 1220

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
 Frame = -3

Query: 589  IEKRLDVGAQSSANVGAVAESSG-IGGGQVTYTKEVTVSRNPTLFQDIFNIPISALKAVS 413
            +EKR  V AQ+  N+G++  ++G   GG  +  +E   S     +      P +  K  S
Sbjct: 923  LEKRNSVSAQTDDNIGSITSTAGKRSGGDCSSMRERRQSTASRHYDSGSQTPTARPKYSS 982

Query: 412  SFLSNTAANTNVSVQKS 362
               S+  ++TN+S  +S
Sbjct: 983  ---SHRNSSTNISTSQS 996


>AE014134-2016|AAF53057.2|  968|Drosophila melanogaster CG31868-PA
           protein.
          Length = 968

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 18/64 (28%), Positives = 27/64 (42%)
 Frame = -3

Query: 589 IEKRLDVGAQSSANVGAVAESSGIGGGQVTYTKEVTVSRNPTLFQDIFNIPISALKAVSS 410
           + K   V A   A VG    SSG GG  ++       + +PT         + A  +VS 
Sbjct: 500 LSKESKVSAVGGAGVGGAVASSGGGGSSMSQLAPPPTAPSPTEQAKSQMAAVVAAASVSP 559

Query: 409 FLSN 398
           F++N
Sbjct: 560 FMTN 563


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,386,586
Number of Sequences: 53049
Number of extensions: 510594
Number of successful extensions: 1490
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1424
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1490
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2930645700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)