Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_C18
         (675 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein ...    23   2.7  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    23   2.7  
AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein ...    23   2.7  
AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific pro...    23   2.7  
DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholi...    22   4.7  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    22   6.1  

>DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein 3
           protein.
          Length = 130

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = +2

Query: 164 YSFPYWNIVLQKLVHCTESINRYCKNVTYNLRCT 265
           Y+  + NI + +++H    +N Y K +    RCT
Sbjct: 25  YTSKFDNINVDEILHSDRLLNNYFKCLMDEGRCT 58


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +2

Query: 224 NRYCKNVTYNLRCT 265
           N+YC N+T N+  T
Sbjct: 108 NKYCGNITLNIEST 121


>AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein
           protein.
          Length = 130

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = +2

Query: 164 YSFPYWNIVLQKLVHCTESINRYCKNVTYNLRCT 265
           Y+  + NI + +++H    +N Y K +    RCT
Sbjct: 25  YTSKFDNINVDEILHSDRLLNNYFKCLMDEGRCT 58


>AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific
           protein 3c precursor protein.
          Length = 130

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = +2

Query: 164 YSFPYWNIVLQKLVHCTESINRYCKNVTYNLRCT 265
           Y+  + NI + +++H    +N Y K +    RCT
Sbjct: 25  YTSKFDNINVDEILHSDRLLNNYFKCLMDEGRCT 58


>DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic
          acetylcholine receptor beta2subunit protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +2

Query: 26 INKKNLIGFLFVVTLLYYHHTFVC 97
          +N KN+   LFV+  +  H   +C
Sbjct: 2  LNMKNIFPVLFVIINVLLHGQVIC 25


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = +2

Query: 446 KNILEQSWIS*HCNFFSVGYLTASNATTFSH 538
           +N+LE++W+  H ++ S   L      + SH
Sbjct: 431 ENLLEKNWLPVHTSYKSGLNLEQEKKDSISH 461


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,706
Number of Sequences: 438
Number of extensions: 3509
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20464920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)